GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_016906955.1	NC_062544	NC_062544.1	Phacochoerus africanus isolate WHEZ1 chromosome 1; ROS_Pafr_v1; whole genome shotgun sequence.	86232176	86682634	57758488	57880072	558644	289112014	0.3	0.3	0.2	0.2	0	0.4	0.9466	0.0037	0.9964	1.9704	1013	1016	2029	34774051	38532626	25249259	26227237	23514	124806687	0.26	0.29	0.22	0.23	0.45	0.9215	0.1067	0.9026	1.9709	145910	756	812	1568	725492	616572	712473	722795	2777332	0.27	0.23	0.24	0.26	0.5	0.8644	0.3067	0.7533	1.9397	8	25635706	28672679	18479007	19214391	513	92002296	0.26	0.3	0.22	0.23	0.45	0.8986	0.1727	0.8505	1.9492	3993	217	173	390	94465	89668	85659	86546	356338	0.28	0.25	0.23	0.24	0.47	0.873	0.2501	0.7932	1.953	94	1558369	1648174	1071893	1094287	5131	5377854	0.27	0.29	0.22	0.22	0	0.44	0.9049	0.148	0.8719	1.9596	2	3	5	72	92	91	109	364	0.2	0.25	0.25	0.3	0.55	0.8935	0.2205	0.8118	1.9781	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20502	24791	6623	12536	17013	25147	16527	12657	16560	19088	13015	22799	15651	6644	11860	14515	14140	20535	16237	14498	30170	8797	16868	14359	28323	16119	7692	13774	9127	18358	15045	13747	11337	8210	16664	16145	14184	18701	10444	21464	18719	8056	22039	17588	15678	9435	14188	19047	11806	11994	5676	8198	7982	17808	15733	20109	4053	9283	8946	4660	15136	5415	12955	5649
GCF_016906955.1	NC_062545	NC_062545.1	Phacochoerus africanus isolate WHEZ1 chromosome 2; ROS_Pafr_v1; whole genome shotgun sequence.	83337955	83469637	56428395	56467430	337084	280040501	0.3	0.3	0.2	0.2	0	0.4	0.9469	0.0011	0.9989	1.9724	1086	1128	2214	33060764	36846583	24363566	25422010	99	119693022	0.26	0.28	0.23	0.23	0.46	0.9195	0.115	0.8955	1.9687	17947	853	870	1723	809366	688858	798594	807292	3104110	0.27	0.23	0.24	0.26	0.5	0.8635	0.3034	0.7555	1.9381	0	25009867	28184557	18172062	18993925	61	90360472	0.26	0.3	0.22	0.23	0.45	0.8986	0.1712	0.8515	1.944	0	177	210	387	82633	79060	70823	73013	305529	0.28	0.25	0.23	0.24	0.47	0.872	0.2508	0.7923	1.9526	125	1346556	1438124	943267	959122	0	4687069	0.27	0.3	0.21	0.22	0	0.43	0.9059	0.1475	0.8714	1.9563	10	11	21	272	401	396	474	1543	0.18	0.26	0.26	0.31	0.56	0.8763	0.2863	0.7618	1.9647	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	22681	27292	7271	13802	18663	28239	19023	14405	18669	20283	14542	26422	17149	7764	13386	15742	16104	21966	18053	16359	33893	9740	19506	16087	31519	17916	8533	15489	10340	20158	16893	15566	12879	9218	18035	18344	15886	20621	11237	24675	21088	9423	24522	19701	16385	10723	15833	21829	13253	13327	6303	9691	9342	19779	17641	21916	4359	10668	10793	4949	16940	5996	14226	6634
GCF_016906955.1	NC_062546	NC_062546.1	Phacochoerus africanus isolate WHEZ1 chromosome 3; ROS_Pafr_v1; whole genome shotgun sequence.	60135727	60159584	42409504	42419269	872895	205996979	0.29	0.29	0.21	0.21	0	0.41	0.9489	0.0003	0.9997	1.976	833	848	1681	25151285	27857194	18867106	19598932	183869	91658386	0.25	0.27	0.23	0.24	0.47	0.9211	0.1016	0.9067	1.9711	143737	666	658	1324	625069	518671	637168	649394	2430302	0.27	0.22	0.25	0.26	0.51	0.8635	0.3087	0.7521	1.9361	0	18776185	20953584	13833449	14392664	40590	67996472	0.25	0.29	0.22	0.23	0.46	0.8964	0.1765	0.8478	1.944	0	137	158	295	63270	61871	59521	59559	244221	0.27	0.24	0.24	0.25	0.48	0.8733	0.2592	0.7858	1.9524	0	1258327	1331321	876919	896840	13	4363420	0.27	0.29	0.22	0.23	0	0.44	0.905	0.1538	0.8666	1.9632	4	5	9	107	171	168	204	650	0.16	0.26	0.26	0.31	0.57	0.8759	0.3454	0.719	1.9533	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	17845	22863	5369	10182	15025	22715	14422	10079	14424	16579	10755	18993	13558	6866	10223	12417	11490	17727	13507	11281	27137	8021	15274	11822	24785	13913	6475	11896	6931	15849	12503	11290	9788	6826	13999	14417	12445	17431	8792	20425	16750	8145	18700	16550	13489	7756	13210	16489	9455	9674	5449	8622	6829	15642	14642	17952	3547	9406	9445	4196	12821	4602	11088	5306
GCF_016906955.1	NC_062547	NC_062547.1	Phacochoerus africanus isolate WHEZ1 chromosome 4; ROS_Pafr_v1; whole genome shotgun sequence.	43172452	43349677	32041422	32071481	1241910	151876942	0.28	0.29	0.21	0.21	0.01	0.42	0.948	0.0025	0.9975	1.9795	1182	1179	2361	17823529	19895510	15125231	15677277	2648	68524195	0.23	0.26	0.25	0.25	0.5	0.9155	0.1309	0.8824	1.9737	16228	962	985	1947	698261	633159	861837	819814	3013071	0.24	0.21	0.27	0.28	0.55	0.8602	0.3139	0.7489	1.9309	0	12687123	14383461	10455530	10921704	1606	48449424	0.22	0.26	0.26	0.27	0.52	0.8839	0.2219	0.8143	1.9374	2459	151	135	286	72671	69272	72499	72307	286749	0.27	0.24	0.25	0.25	0.5	0.8736	0.2534	0.7899	1.952	80	1284814	1349217	910243	925522	0	4469796	0.26	0.28	0.23	0.23	0	0.46	0.9035	0.1496	0.8693	1.9604	16	15	31	424	558	581	730	2293	0.19	0.24	0.25	0.32	0.57	0.875	0.2664	0.775	1.9647	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21644	23777	5880	12526	17677	28427	19390	10714	20175	20392	10356	18498	15075	8960	10834	14963	14575	25635	19369	13095	38157	9815	22020	13050	30400	20692	7605	12598	8192	18434	17928	13344	13842	6502	15865	19558	17464	26484	11950	30143	21473	12386	16246	23307	17362	8343	18506	17075	11856	11218	6901	12200	6057	20951	17348	22903	2944	13159	12916	5435	13376	3699	11475	6690
GCF_016906955.1	NC_062548	NC_062548.1	Phacochoerus africanus isolate WHEZ1 chromosome 5; ROS_Pafr_v1; whole genome shotgun sequence.	38014495	38025351	30084764	30096450	1185149	137406209	0.28	0.28	0.22	0.22	0.01	0.44	0.9495	0.0003	0.9997	1.9854	825	818	1643	16143888	18219534	14183699	14787095	63	63334279	0.24	0.26	0.25	0.26	0.51	0.9206	0.1067	0.9023	1.975	73114	621	646	1267	513648	437903	605738	605378	2162667	0.25	0.21	0.27	0.28	0.54	0.8611	0.3033	0.7555	1.9326	0	12000960	13755707	10296827	10780262	38	46833794	0.22	0.27	0.25	0.26	0.51	0.8896	0.2096	0.8232	1.9413	0	171	118	289	69338	65003	76962	77456	288759	0.25	0.23	0.25	0.26	0.52	0.8744	0.2592	0.7864	1.9528	0	788092	849957	651240	665737	25	2955051	0.25	0.27	0.24	0.24	0	0.48	0.9022	0.1578	0.8631	1.9679	12	18	30	394	494	578	740	2206	0.18	0.23	0.26	0.33	0.6	0.8858	0.2602	0.777	1.9548	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13596	17990	4089	8175	12916	22073	13717	7184	13837	15567	7457	15050	10972	6851	8183	10420	10374	16717	12084	8719	26308	6741	14676	9450	23038	13466	5017	8676	4962	14579	10881	9411	9113	4804	10952	13835	11624	18573	7500	20999	16208	8847	12835	16869	12799	6233	13649	13950	8008	8263	5463	9349	4726	15065	13176	15786	2442	10549	9917	4374	10077	3232	9216	5429
GCF_016906955.1	NC_062549	NC_062549.1	Phacochoerus africanus isolate WHEZ1 chromosome 6; ROS_Pafr_v1; whole genome shotgun sequence.	38181961	38216928	27215701	27235115	414572	131264277	0.29	0.29	0.21	0.21	0	0.41	0.9472	0.0008	0.9992	1.9779	747	668	1415	15540318	17215666	11830233	12331879	1527	56919623	0.25	0.27	0.24	0.24	0.48	0.9186	0.1123	0.8982	1.9723	93431	540	494	1034	417372	357232	442025	448723	1665352	0.26	0.22	0.25	0.27	0.51	0.8626	0.3091	0.7518	1.9367	17	10886075	12212885	8009423	8379566	1464	39489413	0.25	0.29	0.23	0.24	0.47	0.8934	0.1981	0.8321	1.9414	0	134	110	244	70498	67547	64669	65572	268286	0.27	0.24	0.24	0.25	0.49	0.8741	0.2591	0.7867	1.9559	0	1062855	1125637	799698	815300	0	3803490	0.27	0.29	0.22	0.23	0	0.45	0.9077	0.1495	0.8699	1.9659	41	40	81	1030	1367	1598	1922	5917	0.17	0.23	0.27	0.32	0.59	0.8744	0.2525	0.7868	1.9551	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11660	14731	3623	7116	10083	16037	10270	6913	10410	11255	6828	12714	8963	4461	6955	8088	8833	12253	9413	7855	19185	5635	10535	7869	18029	9905	4583	7766	4900	11311	8928	7808	6977	4399	9410	9800	8319	12320	5943	14022	11671	5597	11443	12013	9328	5317	9831	11114	6671	6743	3626	5767	4361	11102	9829	11894	2224	6610	6186	2719	8575	2861	7102	3764
GCF_016906955.1	NC_062550	NC_062550.1	Phacochoerus africanus isolate WHEZ1 chromosome 7; ROS_Pafr_v1; whole genome shotgun sequence.	31063537	31056109	22819162	22812419	495141	108246368	0.29	0.29	0.21	0.21	0	0.42	0.9481	0.0003	0.9997	1.9806	701	664	1365	14311511	15825309	11273648	11752152	12184	53174804	0.25	0.27	0.24	0.24	0.47	0.9198	0.1198	0.8916	1.9738	11806	548	537	1085	432395	380822	470900	465373	1749490	0.26	0.22	0.25	0.27	0.52	0.8626	0.3093	0.7514	1.9366	0	9937392	11106299	7724165	8086173	12174	36866203	0.24	0.28	0.23	0.25	0.48	0.8922	0.2012	0.8294	1.9439	0	111	95	206	55191	52452	56370	56761	220774	0.26	0.23	0.25	0.25	0.5	0.877	0.2472	0.794	1.9586	0	699081	745514	530252	541419	0	2516266	0.26	0.28	0.23	0.23	0	0.46	0.9042	0.1488	0.8717	1.9641	6	5	11	149	212	197	256	814	0.18	0.26	0.24	0.31	0.56	0.8803	0.3047	0.7464	1.9639	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12502	15178	3933	7594	10242	16760	10925	7548	11061	11458	7358	12688	9073	4760	6679	9168	9094	13352	10992	8663	21083	5620	12211	8104	18132	10714	4856	8045	5315	11439	10116	8213	7618	4378	9469	10666	8905	13264	6735	15438	12386	5949	11895	12179	9607	5566	9970	10777	7079	7053	3880	5857	4506	11376	9879	12138	2020	7004	6443	2927	8754	2647	7235	3776
GCF_016906955.1	NC_062551	NC_062551.1	Phacochoerus africanus isolate WHEZ1 chromosome 8; ROS_Pafr_v1; whole genome shotgun sequence.	46922368	46929325	37998326	38014636	284073	170148728	0.28	0.28	0.22	0.22	0	0.45	0.9506	0.0003	0.9997	1.9911	1298	1201	2499	21378630	23835752	19104539	19841191	33964	84194076	0.24	0.25	0.25	0.26	0.51	0.9203	0.1038	0.9049	1.9775	36957	1012	970	1982	751892	643282	937286	922428	3254888	0.24	0.2	0.28	0.28	0.56	0.8607	0.3039	0.7554	1.9311	4	15482579	17495356	13502628	14074627	33951	60589141	0.22	0.25	0.26	0.27	0.53	0.8875	0.2165	0.8184	1.942	0	230	171	401	94570	90588	99875	99711	384744	0.25	0.23	0.26	0.26	0.52	0.8766	0.2475	0.795	1.9564	0	1128655	1229015	944188	976125	13	4277996	0.24	0.27	0.24	0.25	0	0.49	0.9034	0.1695	0.854	1.9686	10	4	14	171	254	277	329	1031	0.17	0.25	0.27	0.32	0.59	0.873	0.2763	0.7672	1.9575	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20822	25871	6232	12526	20263	33450	21060	9582	21554	23451	10989	20308	16847	10776	12520	15562	14997	26534	18354	11405	40108	10388	21587	12835	33870	21510	7352	12402	6447	21270	16707	13623	13836	6773	17326	20265	18101	29811	11204	33275	24923	14564	17076	26881	19713	8580	21621	20517	11623	11585	8426	14547	6439	24277	21565	24618	3272	16303	16475	6460	13930	3730	13117	7636
GCF_016906955.1	NC_062552	NC_062552.1	Phacochoerus africanus isolate WHEZ1 chromosome 9; ROS_Pafr_v1; whole genome shotgun sequence.	36075100	36100799	27735097	27778362	708745	128398103	0.28	0.28	0.22	0.22	0.01	0.43	0.9494	0.0011	0.9989	1.9847	1014	987	2001	15658616	17504595	13116991	13655254	23	59935479	0.24	0.26	0.24	0.25	0.5	0.9142	0.1379	0.8769	1.9764	15307	687	725	1412	504603	447718	594148	586822	2133291	0.25	0.21	0.26	0.27	0.54	0.8629	0.3105	0.7513	1.9378	0	11513185	13075714	9411975	9840665	13	43841552	0.23	0.27	0.24	0.25	0.5	0.8925	0.2049	0.8267	1.9516	0	173	122	295	56602	53555	55038	56082	221277	0.26	0.24	0.24	0.26	0.5	0.8745	0.2629	0.7832	1.9572	203	634278	653429	517021	528349	10	2333087	0.25	0.28	0.23	0.24	0	0.47	0.9019	0.167	0.8566	1.964	93	94	187	2679	3148	3585	4512	13924	0.19	0.23	0.26	0.32	0.58	0.8844	0.2398	0.7933	1.9634	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14674	18849	4406	8897	12612	21852	13801	7651	14526	14561	7230	14265	10764	6313	8128	10492	11218	17119	12925	9251	26415	6923	15329	9575	21995	13666	5262	9075	5406	13390	12239	9855	9511	4603	11212	13518	11295	17272	7680	20647	15655	7936	12151	15993	11946	6253	13370	12932	8401	7905	4958	8007	4649	14980	13656	15508	2222	9312	8846	3860	9417	2637	8263	4653
GCF_016906955.1	NC_062553	NC_062553.1	Phacochoerus africanus isolate WHEZ1 chromosome 10; ROS_Pafr_v1; whole genome shotgun sequence.	41923688	42002021	27523200	27490628	104808	139044345	0.3	0.3	0.2	0.2	0	0.4	0.9468	0.0015	0.9985	1.9681	434	419	853	15481017	17136298	11125086	11613421	14873	55370695	0.27	0.29	0.21	0.22	0.44	0.9234	0.0993	0.9087	1.9677	13607	329	304	633	301427	251035	277853	288879	1119194	0.28	0.23	0.23	0.25	0.49	0.8645	0.306	0.7537	1.9368	0	10876774	12153432	7750401	8095085	14821	38890513	0.27	0.31	0.21	0.22	0.43	0.9033	0.1564	0.8627	1.9444	0	79	89	168	39712	36665	33658	34625	144660	0.28	0.25	0.23	0.24	0.47	0.877	0.249	0.7933	1.9576	0	770691	839611	537919	551899	0	2700120	0.28	0.3	0.21	0.21	0	0.43	0.9065	0.1381	0.8777	1.9602	1	2	3	39	53	57	65	214	0.18	0.25	0.27	0.3	0.57	0.8926	0.2147	0.8127	1.9735	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7929	10299	2923	4963	6600	10053	6293	5653	6235	7126	5808	9984	6046	2944	5070	5919	5662	7786	6406	6371	11317	3503	6749	5973	11041	5874	3140	5674	3686	7260	5955	5746	4559	3791	6661	6756	5318	6825	3973	8082	7630	3212	9979	6765	5807	4198	5362	8184	4749	4856	2396	3745	3926	6581	6275	7593	1720	3907	4027	1920	6304	2456	5187	2457
GCF_016906955.1	NC_062554	NC_062554.1	Phacochoerus africanus isolate WHEZ1 chromosome 11; ROS_Pafr_v1; whole genome shotgun sequence.	40573020	40674825	28496653	28569770	497787	138812055	0.29	0.29	0.21	0.21	0	0.41	0.9491	0.0025	0.9975	1.9759	697	737	1434	18863765	20816521	13988116	14568179	35	68236616	0.25	0.28	0.24	0.23	0.47	0.9183	0.1353	0.8794	1.972	19433	537	569	1106	453754	410948	475069	460933	1800704	0.27	0.23	0.25	0.26	0.5	0.8645	0.3034	0.7554	1.9423	0	13993054	15519923	10129540	10573378	25	50215920	0.26	0.3	0.22	0.23	0.44	0.9006	0.1677	0.8544	1.9503	0	118	134	252	62155	58772	55519	57073	233519	0.27	0.25	0.23	0.25	0.48	0.876	0.2593	0.7868	1.9544	0	937180	995835	693894	710471	0	3337380	0.27	0.29	0.22	0.23	0	0.45	0.9041	0.1605	0.8623	1.9606	4	3	7	85	131	129	162	507	0.17	0.26	0.25	0.32	0.57	0.8781	0.326	0.7292	1.9594	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14068	15100	4186	8110	10490	15208	10836	8820	11899	11898	8180	13292	9701	4860	7388	9317	9505	13743	11825	9769	21013	5610	13327	8395	17630	11228	4839	9094	5956	11064	11487	9211	8733	5374	10381	9876	9293	12575	7275	15318	11756	5422	13129	11099	9789	6186	9349	11729	7710	7292	3627	5038	5032	11274	10166	12314	2343	5942	5602	3002	9232	3130	7803	3727
GCF_016906955.1	NC_062555	NC_062555.1	Phacochoerus africanus isolate WHEZ1 chromosome 12; ROS_Pafr_v1; whole genome shotgun sequence.	21442221	21441716	15857816	15852177	64180	74658110	0.29	0.29	0.21	0.21	0	0.42	0.9481	0.0002	0.9998	1.9833	268	264	532	8802743	9859382	7018688	7329102	38819	33048734	0.26	0.28	0.23	0.24	0.47	0.9232	0.1056	0.9034	1.9779	387	204	191	395	193708	156307	188600	194324	732939	0.28	0.22	0.24	0.26	0.5	0.8637	0.3129	0.7489	1.9386	49	6850810	7774155	5425537	5672083	51	25722636	0.25	0.29	0.22	0.23	0.45	0.9044	0.1617	0.8588	1.9575	0	53	67	120	28588	27691	27797	27459	111535	0.27	0.24	0.24	0.24	0.49	0.8783	0.2461	0.7946	1.9603	0	541313	578671	403976	411491	10803	1946254	0.27	0.28	0.22	0.23	0	0.45	0.9061	0.153	0.8676	1.9683	4	2	6	73	125	107	140	445	0.16	0.28	0.24	0.31	0.55	0.877	0.394	0.6838	1.9499	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5043	6845	1739	3134	4520	6888	4376	3330	4275	4470	3452	6550	3869	2286	3177	3818	3657	5089	4101	3609	7242	2304	4398	3916	7372	4093	1900	3418	2130	4970	3767	3447	3081	2106	4165	4586	3634	5127	2607	5927	4943	2424	6237	4635	3750	2553	3828	5437	2827	2957	1850	2644	2314	4428	4400	4945	941	3001	2895	1387	4035	1304	3031	1879
GCF_016906955.1	NC_062556	NC_062556.1	Phacochoerus africanus isolate WHEZ1 chromosome 13; ROS_Pafr_v1; whole genome shotgun sequence.	23307137	23424354	15998524	15991295	53894	78775204	0.3	0.3	0.2	0.2	0	0.41	0.947	0.0027	0.9973	1.9742	209	229	438	8234392	9126825	6276166	6582421	0	30219804	0.26	0.28	0.23	0.24	0.46	0.9254	0.1027	0.9057	1.9766	44	143	166	309	156590	129777	155208	159054	600629	0.28	0.23	0.24	0.26	0.5	0.8658	0.302	0.7566	1.9356	0	6292116	7057068	4746114	4983374	0	23078672	0.25	0.3	0.22	0.23	0.45	0.9068	0.1618	0.8578	1.9563	1650	56	60	116	31234	29230	31604	31774	123842	0.27	0.24	0.24	0.25	0.49	0.8785	0.2349	0.8038	1.9599	0	770684	809151	542492	559496	0	2681823	0.27	0.29	0.22	0.23	0	0.44	0.9084	0.1419	0.876	1.9639	3	2	5	60	90	98	115	363	0.17	0.25	0.27	0.32	0.59	0.8869	0.2973	0.757	1.9544	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3913	5555	1337	2436	3478	5490	3311	2844	3570	3644	2760	5110	3157	2153	2450	3363	2912	4232	3607	3224	6020	1876	3556	3058	5946	3389	1446	2868	1790	3750	3203	2889	2640	1783	3354	3905	2947	4052	2334	4701	4231	2000	5270	4007	3196	2234	3152	4182	2386	2297	1661	2561	1864	3572	3394	3868	790	2507	2799	1141	2885	1172	2545	1447
GCF_016906955.1	NC_062557	NC_062557.1	Phacochoerus africanus isolate WHEZ1 chromosome 14; ROS_Pafr_v1; whole genome shotgun sequence.	15779056	15855644	14554193	14575701	159201	60923795	0.26	0.26	0.24	0.24	0	0.48	0.9503	0.0032	0.9968	1.9973	707	687	1394	8640972	9692380	8682873	9018824	26249	36061298	0.22	0.24	0.27	0.27	0.54	0.9172	0.1097	0.8998	1.9744	6604	551	544	1095	399291	337668	529703	517979	1784641	0.24	0.2	0.28	0.29	0.57	0.8608	0.308	0.7521	1.9303	112	6039299	6910690	5916600	6189822	2458	25058869	0.21	0.24	0.27	0.28	0.55	0.8823	0.2236	0.8125	1.9358	0	99	117	216	49135	47934	60278	60383	217730	0.24	0.22	0.27	0.27	0.54	0.876	0.2429	0.7986	1.9516	0	411291	447561	392043	401931	0	1652826	0.23	0.25	0.26	0.26	0	0.52	0.9014	0.1776	0.8475	1.9684	19	18	37	508	625	698	892	2723	0.19	0.23	0.25	0.33	0.58	0.8826	0.2271	0.801	1.9656	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10454	15001	2859	6031	10680	20692	11723	4527	12307	12488	4745	10987	8069	6087	5794	8501	7721	13943	9887	5755	23552	5737	12946	6748	20178	12201	3802	5888	3426	11784	9795	6815	8032	2696	8156	12513	9806	17614	6531	19638	14529	8677	8117	15651	11552	4333	12308	9994	6010	6172	4842	8400	2738	12438	11181	13182	1488	9863	9393	3616	7638	1774	6956	4776
GCF_016906955.1	NC_062558	NC_062558.1	Phacochoerus africanus isolate WHEZ1 chromosome 15; ROS_Pafr_v1; whole genome shotgun sequence.	40034500	40158112	30652344	30673281	368826	141887063	0.28	0.28	0.22	0.22	0	0.43	0.9476	0.0019	0.9981	1.9857	727	718	1445	19721584	22094611	15999367	16673444	54392	74543398	0.25	0.27	0.24	0.24	0.48	0.9223	0.099	0.9086	1.9784	4292	572	583	1155	502244	418726	549397	554298	2024665	0.26	0.22	0.26	0.27	0.52	0.8633	0.304	0.7555	1.9388	0	14630879	16579965	11769228	12293552	74	55273698	0.24	0.28	0.23	0.24	0.48	0.8987	0.1753	0.8481	1.9596	0	109	118	227	57952	54802	56315	57159	226228	0.27	0.24	0.24	0.25	0.49	0.8773	0.2289	0.8078	1.9609	0	807391	880947	597880	607375	0	2893593	0.26	0.29	0.23	0.23	0	0.46	0.9049	0.1611	0.8614	1.9653	8	2	10	129	184	191	238	742	0.17	0.25	0.26	0.32	0.58	0.8805	0.2905	0.7584	1.958	3	3	66	75	99	117	357	0.18	0.21	0.28	0.33	0	0.61	0.8747	0.1472	0.8631	1.9637	13692	18029	4043	8189	12434	20500	12557	7505	12652	14350	7704	15611	10472	5681	7933	9830	9752	15416	11028	8583	23560	6566	13169	9445	21564	12606	5102	8856	5206	13562	10677	9005	8426	4709	11200	12611	10672	16175	7108	18089	14845	7058	13571	14511	11494	6161	11863	13656	7946	8082	4652	7233	4634	14119	12782	15324	2374	8468	8129	3560	9917	3084	8901	4694
GCF_016906955.1	NC_062559	NC_062559.1	Phacochoerus africanus isolate WHEZ1 chromosome 16; ROS_Pafr_v1; whole genome shotgun sequence.	15895850	15863212	12089696	12070766	30718	55950242	0.28	0.28	0.22	0.22	0	0.43	0.9497	0.0018	0.9982	1.9863	277	277	554	8191708	9135903	6644034	6918302	26849	30916796	0.25	0.27	0.24	0.24	0.48	0.9218	0.1033	0.9058	1.9769	6675	214	203	417	159298	139266	190380	186785	675729	0.25	0.22	0.26	0.27	0.53	0.8624	0.3049	0.7545	1.9346	0	6013808	6791486	4888432	5106653	26836	22827215	0.24	0.27	0.24	0.25	0.49	0.8984	0.1835	0.8425	1.9515	0	50	54	104	33288	31185	30373	31105	125951	0.28	0.24	0.24	0.25	0.49	0.8761	0.263	0.784	1.9483	0	501406	519516	362190	365126	0	1748238	0.27	0.29	0.22	0.22	0	0.45	0.9086	0.1394	0.877	1.9688	6	8	14	206	227	245	332	1010	0.2	0.22	0.24	0.33	0.57	0.8833	0.2232	0.804	1.972	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4339	5572	1303	2795	3946	6254	4255	2399	4471	4908	2527	4663	3412	2218	2594	3281	3243	5134	3905	2910	8110	2217	4509	2835	6948	4273	1504	2826	1726	4121	3476	3009	2951	1491	3593	3998	3619	6045	2461	6641	5222	2650	3993	5216	4148	1984	4240	4307	2599	2555	1695	3000	1442	4807	4480	4843	614	3095	3252	1293	2999	849	2725	1593
GCF_016906955.1	NC_062560	NC_062560.1	Phacochoerus africanus isolate WHEZ1 chromosome X; ROS_Pafr_v1; whole genome shotgun sequence.	38225502	38291345	26151061	26189550	1416629	130274087	0.29	0.29	0.2	0.2	0.01	0.4	0.9457	0.0016	0.9984	1.9686	490	459	949	11245124	12522574	8555242	8808569	190263	41321772	0.25	0.26	0.24	0.24	0.48	0.9175	0.1173	0.8938	1.9694	26834	415	354	769	320274	267224	323295	329425	1240218	0.27	0.22	0.25	0.26	0.51	0.8655	0.3047	0.7546	1.9405	0	8745588	9858055	6439527	6625656	0	31668826	0.24	0.29	0.23	0.24	0.47	0.8941	0.1974	0.8328	1.9419	0	60	90	150	30910	31312	29191	29011	120424	0.28	0.24	0.23	0.25	0.48	0.8738	0.2646	0.7815	1.9502	0	473811	496922	361522	374270	76047	1782572	0.26	0.28	0.22	0.24	0.01	0.46	0.9042	0.173	0.8516	1.9484	1	4	5	62	104	91	104	361	0.17	0.29	0.25	0.29	0.54	0.879	0.3206	0.7382	1.9693	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9216	11717	2893	5496	7459	12635	7689	5496	7405	7875	5873	10614	6403	3075	5284	6402	6350	8991	7190	6062	13302	4231	7676	6953	12690	7421	3413	5890	3879	8140	6649	5760	5123	3469	6499	7237	5881	8692	4584	11116	8458	4125	9494	8506	6384	4060	6739	8161	4529	4898	2630	3952	3384	8158	7066	9000	1627	4254	4623	2203	6680	1963	5169	2840