GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_006229205.1	NC_043700	NC_043700.1	Suricata suricatta isolate VVHF042 chromosome 1; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	59048251	59187545	37712275	37758007	515000	194221078	0.3	0.3	0.19	0.19	0.39	0.9487	0.0018	0.9982	1.9632	847	794	1641	22756856	24612451	15538187	16230625	174400	79312519	0.28	0.29	0.21	0.21	0.42	0.9217	0.098	0.9096	1.9634	39497	466	453	919	439882	365424	390252	408303	337	1604198	0.28	0.23	0.23	0.25	0.48	0.8648	0.3097	0.7518	1.9377	0	16394734	18001599	11063513	11584880	122163	57166889	0.27	0.31	0.2	0.21	0	0.41	0.9019	0.1578	0.8614	1.9372	0	351	332	683	118682	105982	98508	98181	421353	0.29	0.25	0.23	0.23	0.46	0.8662	0.2984	0.7601	1.9417	295	2672404	2728137	1691807	1717682	22500	8832530	0.29	0.3	0.2	0.21	0.41	0.9038	0.1502	0.869	1.9501	2	3	5	71	98	88	118	375	0.19	0.26	0.23	0.31	0.55	0.8865	0.314	0.7358	1.97	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11789	14833	4364	7596	9459	14014	9026	8300	9059	10333	8647	14580	8827	4214	7321	8700	8632	11079	8956	9202	15429	5136	9245	8779	15403	8530	4741	8358	5677	10872	8105	8439	6322	5653	9893	9298	7724	9294	5716	10636	10015	4069	14771	8965	8142	6113	7562	12114	7168	7210	3271	4683	5653	9500	8751	10936	2720	5317	5188	2842	9479	3791	7833	3475
GCF_006229205.1	NC_043701	NC_043701.1	Suricata suricatta isolate VVHF042 chromosome 2; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	54420021	54523902	38629007	38650376	484800	186708106	0.29	0.29	0.21	0.21	0.41	0.9503	0.0012	0.9988	1.9776	1008	1052	2060	26065791	28445191	19243973	20151499	189900	94096354	0.26	0.28	0.22	0.23	0.46	0.921	0.1028	0.9055	1.9729	28461	599	618	1217	554449	470686	559326	567017	515	2151993	0.27	0.22	0.25	0.26	0.51	0.8638	0.3063	0.7539	1.9387	0	19353570	21391486	14093809	14822208	144485	69805558	0.25	0.29	0.22	0.23	0.01	0.45	0.8997	0.1725	0.8501	1.9446	0	361	391	752	132237	116375	123502	122417	494531	0.28	0.23	0.24	0.24	0.49	0.8695	0.2884	0.7664	1.949	0	2043647	2089781	1440317	1455878	13300	7042923	0.27	0.28	0.22	0.22	0.44	0.9017	0.1597	0.8619	1.9604	12	16	28	424	440	505	659	2028	0.21	0.22	0.25	0.32	0.57	0.8834	0.1773	0.8435	1.973	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15154	18812	5001	9653	12944	19054	13223	9800	13017	14646	9815	17780	11613	6144	9078	10988	11034	15723	12248	10964	22807	7161	13419	10713	21260	12540	5816	10304	6562	14214	11171	10434	9126	6205	12930	12495	11023	15101	7960	17209	14570	6523	16796	13714	11790	7430	11821	15145	9206	8826	4504	6941	6034	14149	12709	15309	2863	8288	8141	4022	11322	3851	9486	4930
GCF_006229205.1	NC_043702	NC_043702.1	Suricata suricatta isolate VVHF042 chromosome 3; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	51977759	51739704	35849170	35788940	463100	175818673	0.3	0.29	0.2	0.2	0.41	0.9496	0.0031	0.9969	1.9743	1036	1051	2087	24123624	26119975	17308417	18074106	185700	85811822	0.26	0.27	0.23	0.24	0.46	0.9198	0.1051	0.9039	1.9689	14178	603	636	1239	629097	523419	618026	630068	1085	2401695	0.27	0.22	0.25	0.26	0.51	0.8637	0.3069	0.7534	1.9381	0	17493217	19230065	12379615	12971641	140915	62215453	0.26	0.29	0.22	0.23	0.01	0.45	0.8958	0.1819	0.8433	1.935	1253	387	380	767	135327	123188	126835	124824	510174	0.28	0.24	0.24	0.24	0.48	0.8691	0.2877	0.7669	1.9476	0	2404319	2431588	1611139	1619553	17400	8083999	0.27	0.28	0.22	0.22	0.44	0.9023	0.1591	0.8621	1.9571	14	9	23	287	400	435	554	1676	0.17	0.24	0.26	0.33	0.59	0.8807	0.3142	0.7361	1.9518	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18102	22541	5711	10468	14382	21651	14052	10733	14398	16260	11217	19128	13809	6733	10234	12327	12210	17342	13506	11430	25811	7820	14983	11488	24544	13873	7021	12269	7131	16030	12340	11470	10082	7379	14413	13849	12004	16458	8570	18894	15888	6930	19127	14544	12576	7940	12875	16825	9518	9972	5125	7372	7387	15196	14569	17514	3787	9034	8780	4199	13233	4867	11100	5332
GCF_006229205.1	NC_043703	NC_043703.1	Suricata suricatta isolate VVHF042 chromosome 4; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	48969306	48872841	33350200	33395777	384800	164972924	0.3	0.3	0.2	0.2	0.4	0.9485	0.0017	0.9983	1.9729	809	848	1657	19578416	21294625	14068679	14735732	130300	69807752	0.27	0.28	0.22	0.23	0.45	0.922	0.1016	0.9064	1.973	9952	443	446	889	419639	352575	390391	405433	432	1568470	0.28	0.23	0.24	0.26	0.49	0.8639	0.3054	0.7543	1.9398	13	13582352	15028384	9662679	10188719	93868	48556002	0.26	0.3	0.21	0.22	0.01	0.43	0.9001	0.1784	0.8451	1.9443	1686	351	373	724	128946	114742	110572	109782	464042	0.29	0.24	0.24	0.24	0.48	0.8699	0.2854	0.7674	1.9512	52	2741695	2812401	1853455	1867240	16200	9290991	0.28	0.29	0.21	0.22	0.43	0.9041	0.1487	0.87	1.9594	4	8	12	156	220	214	284	874	0.18	0.25	0.24	0.33	0.57	0.8761	0.3198	0.7337	1.9601	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11178	14566	3956	7010	9307	13882	9058	7637	8869	10232	7967	14027	8428	4134	7011	8344	8191	11060	9045	8649	15711	5051	9290	8563	15574	8589	4533	8067	5091	10425	8305	8210	6315	5154	9101	9480	7542	9663	5808	11331	10278	4402	13436	9275	8237	5912	7720	11434	6713	6920	3361	4818	5272	9641	8580	10402	2373	5365	5495	2884	8680	3372	7430	3472
GCF_006229205.1	NC_043704	NC_043704.1	Suricata suricatta isolate VVHF042 chromosome 5; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	46929943	46664075	31023378	30930649	478000	156026045	0.3	0.3	0.2	0.2	0.4	0.9474	0.0043	0.9957	1.9683	799	805	1604	19544145	21150773	13717750	14247356	160000	68820024	0.27	0.28	0.22	0.22	0.44	0.9193	0.1092	0.9008	1.9674	1113	453	447	900	398508	338597	369880	379889	339	1487213	0.28	0.23	0.24	0.26	0.49	0.8643	0.3114	0.7504	1.9378	0	13295372	14583524	9233352	9618035	115161	46845444	0.26	0.3	0.21	0.22	0.01	0.43	0.8999	0.1686	0.8527	1.9382	0	338	335	673	112759	101732	100463	100024	414978	0.28	0.24	0.23	0.24	0.48	0.8672	0.2974	0.7597	1.9461	0	2782680	2876807	1830630	1864183	19400	9373700	0.28	0.29	0.21	0.21	0.43	0.9057	0.1431	0.8741	1.9585	3	3	6	89	102	109	136	436	0.2	0.23	0.25	0.31	0.56	0.8722	0.1961	0.8314	1.9735	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11077	13012	3825	6941	8755	12732	8322	7299	8871	10126	7567	12947	8447	3804	6710	7835	8013	10318	8837	8290	15079	4671	8801	7499	14696	8293	4171	7609	5148	10051	7709	7842	5877	4851	9229	8149	7371	9031	5636	10336	9694	3773	12885	8852	8272	5471	7350	10962	6874	6646	2921	4111	4962	9176	8232	10311	2478	4908	4780	2543	8550	3249	7191	3114
GCF_006229205.1	NC_043705	NC_043705.1	Suricata suricatta isolate VVHF042 chromosome 6; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	44079599	44119983	29642771	29620028	399400	147861781	0.3	0.3	0.2	0.2	0.4	0.9488	0.0008	0.9992	1.9706	818	773	1591	17723647	19219982	12516896	13035413	121400	62617338	0.27	0.29	0.22	0.22	0.44	0.9206	0.1077	0.9017	1.9692	74122	487	423	910	405483	345988	381834	391374	608	1525287	0.28	0.23	0.24	0.26	0.49	0.8654	0.31	0.7514	1.9392	29	11821256	13061898	8289978	8690353	80292	41943777	0.26	0.3	0.21	0.22	0.01	0.43	0.8989	0.171	0.8514	1.939	0	309	323	632	101726	90980	87781	86875	367362	0.29	0.24	0.23	0.24	0.47	0.8668	0.2971	0.7605	1.9466	0	2382749	2456074	1591987	1605108	17000	8052918	0.28	0.29	0.21	0.21	0.42	0.9049	0.1414	0.8755	1.9582	6	6	12	149	213	224	298	884	0.17	0.24	0.25	0.34	0.59	0.8705	0.3473	0.7116	1.9495	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11335	13632	4044	7253	8963	13665	9068	7517	9193	9840	7817	13032	8562	3880	6775	8054	8167	11255	8991	8426	15497	4914	9276	8543	14692	8764	4564	7808	5357	9980	8417	7636	6315	4975	9327	9068	7380	9290	5747	10993	9869	4196	12610	8775	7714	5539	7481	10795	6618	6526	2958	4476	4755	9627	8774	10717	2291	5128	4830	2669	8128	3033	7084	3155
GCF_006229205.1	NC_043706	NC_043706.1	Suricata suricatta isolate VVHF042 chromosome 7; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	43417505	43382840	29119148	29127384	421100	145467977	0.3	0.3	0.2	0.2	0.4	0.9493	0.0005	0.9995	1.9703	900	897	1797	18721381	20282634	13221028	13783030	149400	66157473	0.26	0.28	0.22	0.23	0.46	0.9186	0.1117	0.8984	1.9714	87155	489	502	991	425868	360323	413047	425377	709	1625324	0.27	0.23	0.24	0.26	0.5	0.8638	0.3099	0.7512	1.939	0	12809661	14134578	8819489	9251473	105409	45120610	0.26	0.3	0.21	0.23	0.01	0.44	0.8963	0.1933	0.8361	1.9409	0	319	321	640	117077	105443	106724	106000	435244	0.28	0.24	0.24	0.24	0.48	0.8707	0.2858	0.7683	1.9492	0	2239487	2312667	1530710	1549462	16800	7649126	0.27	0.29	0.22	0.22	0.44	0.9018	0.1575	0.8635	1.9569	65	53	118	1651	1981	2273	2892	8797	0.19	0.23	0.26	0.33	0.59	0.8847	0.2438	0.7895	1.9601	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11882	15056	3963	7251	9389	15011	9740	7693	9680	10905	7441	13722	8881	4336	7001	8348	8510	11580	9386	8493	17466	5508	10187	8126	16541	9435	4583	8112	5213	11008	8788	8112	6941	5016	9292	9464	8122	10693	5910	12137	10731	4746	12976	9978	8281	5544	8619	11703	6938	6771	3324	4699	4847	10450	9568	11171	2503	5944	5455	2776	8776	3210	7373	3558
GCF_006229205.1	NC_043707	NC_043707.1	Suricata suricatta isolate VVHF042 chromosome 8; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	39039150	39083612	31444772	31487485	398400	141453419	0.28	0.28	0.22	0.22	0.44	0.9525	0.0012	0.9988	1.9901	1339	1306	2645	19003051	20871743	16258852	16970725	162500	73266871	0.24	0.26	0.25	0.25	0.5	0.9192	0.105	0.9037	1.9733	155908	852	866	1718	671327	570674	797957	797219	1393	2838570	0.24	0.21	0.27	0.28	0.55	0.8608	0.3083	0.7527	1.9329	1	13501444	15093911	11271767	11846444	113707	51827273	0.22	0.26	0.25	0.26	0.01	0.51	0.8881	0.2131	0.82	1.9369	0	417	376	793	145526	132097	149175	147489	574287	0.26	0.23	0.25	0.26	0.51	0.87	0.2765	0.7752	1.9496	0	1617526	1688939	1278550	1286924	14700	5886639	0.25	0.27	0.24	0.24	0.48	0.899	0.1692	0.8539	1.9628	34	20	54	663	946	1016	1316	3941	0.17	0.24	0.26	0.33	0.59	0.8807	0.307	0.7414	1.9508	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18205	24257	5411	11388	17402	29298	18103	9278	18518	20418	9284	19643	14462	8854	10747	12956	13576	22259	15751	10766	34491	9489	19044	11961	30911	18201	7119	11210	6184	19290	14249	12185	12298	5505	14856	18045	15424	24351	9860	27151	21277	11242	16248	22160	16654	7914	18386	17826	11010	10735	6886	11248	5540	20074	17415	21619	3125	13852	12969	5922	13208	3820	11987	7124
GCF_006229205.1	NC_043708	NC_043708.1	Suricata suricatta isolate VVHF042 chromosome 9; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	40650073	40435894	29353349	29259939	383700	140082955	0.29	0.29	0.21	0.21	0.42	0.9502	0.0042	0.9958	1.9798	974	1018	1992	20169342	22105849	15156234	15870722	164200	73466347	0.26	0.27	0.23	0.23	0.46	0.9199	0.1101	0.8997	1.9717	14802	570	597	1167	535202	452457	545233	557684	752	2091328	0.27	0.22	0.25	0.26	0.51	0.8633	0.3095	0.752	1.9384	0	13605016	15237078	10109256	10636740	113848	49701938	0.25	0.29	0.22	0.23	0.01	0.45	0.8956	0.1878	0.8385	1.9406	0	368	386	754	129396	117528	121815	121588	490327	0.28	0.24	0.24	0.25	0.49	0.8685	0.2852	0.7688	1.9472	0	2369652	2429280	1626404	1654556	15500	8095392	0.27	0.28	0.22	0.22	0.44	0.9034	0.1535	0.8653	1.9602	14	18	32	407	580	591	794	2372	0.17	0.25	0.25	0.33	0.58	0.8858	0.3242	0.7303	1.9539	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14619	18773	4940	9207	12626	20820	12830	8860	12452	14132	9205	17630	11228	5570	8913	10492	10960	15485	11830	10041	23126	6767	13220	10854	21555	12094	5925	9941	6187	13610	10613	10187	8757	5606	11710	13022	10774	14597	7548	17157	14453	6601	15171	13636	11355	6799	11284	14322	8697	8716	4370	6621	5821	13684	12235	15012	2783	8072	7590	3766	10783	3602	9234	4778
GCF_006229205.1	NC_043709	NC_043709.1	Suricata suricatta isolate VVHF042 chromosome 10; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	40142172	40079309	28288662	28266258	391500	137167901	0.29	0.29	0.21	0.21	0.41	0.9505	0.0012	0.9988	1.9768	923	931	1854	18987217	20651979	13849413	14480433	141700	68110742	0.26	0.28	0.23	0.23	0.46	0.9205	0.1085	0.9006	1.9704	3851	587	590	1177	497876	427032	501083	506018	731	1932740	0.27	0.22	0.25	0.26	0.51	0.8628	0.3108	0.7504	1.9388	3586	13100016	14468717	9443493	9897413	102869	47012508	0.25	0.29	0.22	0.23	0.01	0.45	0.8941	0.1962	0.8327	1.9395	0	303	314	617	99592	90289	89277	88342	367500	0.28	0.24	0.24	0.24	0.48	0.8667	0.2915	0.7649	1.9456	0	1957266	1993378	1335865	1361464	12500	6660473	0.28	0.29	0.22	0.22	0.43	0.903	0.1487	0.8696	1.9587	2	8	10	127	184	183	243	737	0.17	0.25	0.25	0.33	0.58	0.8849	0.3231	0.7272	1.9573	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14225	17267	4647	8843	11492	18002	11887	8939	11795	12479	8976	15603	10372	4995	8033	10273	10188	14189	11420	9879	21409	6323	12429	9688	19596	11274	5623	9354	6226	12953	10644	9464	8188	5474	11121	11403	9521	13402	7252	15475	13010	5765	14502	12474	10370	6528	10427	13008	8112	7958	3956	5685	5422	12437	10699	13555	2621	7138	6491	3356	10444	3435	8591	4220
GCF_006229205.1	NC_043710	NC_043710.1	Suricata suricatta isolate VVHF042 chromosome 11; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	31319896	31098920	23286834	23184008	350100	109239758	0.29	0.28	0.21	0.21	0.43	0.9507	0.0058	0.9943	1.9827	997	1023	2020	14592815	15831965	11682178	12154399	138500	54399857	0.24	0.27	0.24	0.24	0.48	0.9149	0.1364	0.8781	1.9698	56669	651	738	1389	470114	447649	559036	530699	1367	2008865	0.24	0.21	0.27	0.27	0.54	0.8623	0.309	0.7514	1.935	0	10363502	11387687	8090188	8497369	100933	38439679	0.22	0.26	0.25	0.26	0.01	0.51	0.8872	0.2143	0.8193	1.9294	0	287	251	538	99342	90927	100100	97930	388299	0.27	0.23	0.25	0.25	0.5	0.8666	0.2904	0.7649	1.9473	28	1158796	1192884	856007	862059	9000	4078746	0.26	0.28	0.23	0.23	0.47	0.9001	0.1647	0.8574	1.9629	8	7	15	214	287	265	358	1124	0.19	0.26	0.23	0.32	0.55	0.8742	0.2987	0.7485	1.9672	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15469	15866	4356	9030	11743	18104	12927	9009	13489	13260	7502	12256	10173	5616	7445	9731	10428	16465	13724	10093	25016	6287	15393	8625	19418	13026	5611	9440	6231	12189	13199	9792	9659	4757	10876	12219	11050	16168	8198	18658	13404	7458	11124	14179	11535	6305	11858	11286	8810	8168	4092	6563	4535	13608	11107	14312	2067	8423	7563	3694	9034	2484	7648	4408
GCF_006229205.1	NC_043711	NC_043711.1	Suricata suricatta isolate VVHF042 chromosome 12; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	28942291	28831117	24050065	24010175	358200	106191848	0.27	0.27	0.23	0.23	0.45	0.9518	0.0028	0.9973	1.992	1035	1075	2110	15315361	16751552	13475064	14024414	157000	59723391	0.23	0.25	0.26	0.26	0.52	0.9187	0.1061	0.9027	1.9743	70071	696	745	1441	515074	443451	672608	659232	1226	2291591	0.24	0.2	0.28	0.29	0.57	0.8592	0.3135	0.7493	1.9283	0	10239218	11403913	8887724	9328674	110874	39970403	0.21	0.24	0.26	0.27	0.01	0.54	0.8832	0.2248	0.8118	1.929	0	304	289	593	112071	102429	122480	118207	455187	0.26	0.22	0.26	0.26	0.52	0.8688	0.2779	0.7742	1.9489	0	1294764	1329007	1005511	1025572	12300	4667154	0.25	0.26	0.24	0.24	0.48	0.8992	0.1722	0.8515	1.9647	7	5	12	164	214	224	282	884	0.19	0.24	0.25	0.32	0.57	0.8948	0.251	0.7852	1.968	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14819	18831	3980	8483	14271	23795	14864	5957	15080	16795	6133	13646	11289	8031	7940	10743	10006	19197	12719	7723	29331	7578	16056	8795	24464	15521	5268	8010	4431	15429	12213	9320	10209	3633	11642	15562	13321	21143	8583	24534	17752	10820	10339	19722	14247	5508	15293	12846	8544	8348	6020	10440	3448	16216	14593	17713	2013	12354	11584	5026	9828	2325	9027	5963
GCF_006229205.1	NC_043712	NC_043712.1	Suricata suricatta isolate VVHF042 chromosome 13; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	25731804	25834316	19166144	19210144	272800	90215208	0.29	0.29	0.21	0.21	0.43	0.9506	0.0031	0.9969	1.9828	582	588	1170	11693770	12829835	9414664	9819483	113000	43870752	0.25	0.26	0.24	0.24	0.49	0.9187	0.1094	0.8999	1.9696	35097	374	372	746	306878	260811	345253	344046	624	1257612	0.25	0.21	0.26	0.28	0.54	0.8617	0.3068	0.7536	1.9321	62	7534154	8436635	6151941	6460565	73876	28657171	0.23	0.27	0.24	0.25	0.01	0.5	0.8936	0.1905	0.8367	1.9358	0	186	196	382	74688	68622	75974	74151	293435	0.27	0.23	0.24	0.25	0.49	0.8713	0.2809	0.7711	1.9493	74	1388442	1453141	945363	959481	8300	4754727	0.26	0.28	0.23	0.23	0.46	0.9019	0.1552	0.8655	1.9627	3	2	5	65	102	81	118	366	0.18	0.28	0.22	0.32	0.54	0.8566	0.3896	0.6779	1.9642	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8545	10948	2701	5224	7531	12110	7833	4683	8109	8165	4928	9282	6574	3857	4966	6210	6198	9832	7137	5336	14627	4058	8409	5713	13152	7716	3080	5204	3321	8569	6910	5618	5628	2864	6822	8098	6861	9900	4671	11715	9009	4667	8031	9145	6918	3674	7613	8132	5042	4886	2962	4881	2879	8600	7600	8827	1285	5617	5602	2508	5975	1804	5034	3096
GCF_006229205.1	NC_043713	NC_043713.1	Suricata suricatta isolate VVHF042 chromosome 14; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	25328104	25274774	19273589	19288563	260900	89425930	0.28	0.28	0.22	0.22	0.43	0.9507	0.0014	0.9986	1.9852	567	549	1116	11564965	12680955	9420009	9824327	109900	43600156	0.25	0.27	0.23	0.24	0.47	0.9223	0.1002	0.9075	1.9777	10459	325	313	638	295835	243900	321449	326662	717	1188563	0.26	0.21	0.26	0.27	0.53	0.8645	0.303	0.7561	1.9381	0	7848980	8782764	6345306	6664780	70983	29712813	0.24	0.28	0.23	0.24	0.01	0.48	0.899	0.1801	0.8432	1.9487	320	225	219	444	82765	76106	83851	80950	323672	0.27	0.23	0.25	0.25	0.5	0.87	0.29	0.7671	1.9455	0	1098958	1139097	813837	826087	9700	3887679	0.26	0.28	0.23	0.23	0.46	0.9023	0.1556	0.865	1.9627	4	6	10	132	185	174	235	726	0.18	0.25	0.24	0.32	0.56	0.8879	0.3175	0.7334	1.9616	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7983	10767	2436	4737	7300	12189	7192	4331	7252	7858	4480	9296	6181	3726	4821	5922	5671	9157	6469	4976	13160	3757	7583	5500	12706	7164	2995	5034	2959	8111	6229	5314	5193	2850	6340	7672	6666	9021	4210	10307	8637	4502	7818	8429	6593	3741	6677	7930	4782	4867	2819	4624	2738	7840	7296	8552	1378	5463	5182	2410	5953	1838	5119	3091
GCF_006229205.1	NC_043714	NC_043714.1	Suricata suricatta isolate VVHF042 chromosome 15; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	23284503	23242499	15951521	15914303	206600	78599426	0.3	0.3	0.2	0.2	0.41	0.9483	0.0021	0.9979	1.9732	366	398	764	9219789	9995656	6597043	6883870	80100	32776458	0.27	0.28	0.22	0.23	0.45	0.9201	0.1033	0.9055	1.9624	11369	182	209	391	176027	149069	175007	181859	340	682302	0.27	0.23	0.24	0.26	0.51	0.8631	0.3006	0.7578	1.934	0	6105774	6724572	4339166	4547005	54360	21770877	0.25	0.29	0.22	0.23	0.01	0.45	0.8944	0.1827	0.843	1.9224	0	174	181	355	67306	60119	57894	58540	243859	0.28	0.24	0.23	0.24	0.48	0.8689	0.2923	0.7646	1.9457	0	1302117	1353951	896626	912338	9300	4474332	0.28	0.29	0.21	0.22	0.43	0.9047	0.1488	0.8705	1.9549	4	2	6	87	103	106	141	437	0.2	0.24	0.24	0.32	0.57	0.8731	0.2509	0.7875	1.9693	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4810	5873	1713	2894	4214	6205	4038	3189	3793	4423	3226	5562	3476	2025	2860	3319	3340	5158	3807	3618	7438	2197	3945	3232	7041	3690	1858	3299	2046	4635	3429	3407	2685	2122	4000	4088	3513	4433	2478	5248	4598	2373	5371	4520	3651	2408	3691	4738	2808	2792	1509	2546	2226	4334	3807	4736	1039	2872	2807	1403	3550	1360	3008	1675
GCF_006229205.1	NC_043715	NC_043715.1	Suricata suricatta isolate VVHF042 chromosome 16; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	15786169	15794965	13728361	13761554	235600	59306649	0.27	0.27	0.23	0.23	0.46	0.9527	0.0015	0.9985	1.9943	721	765	1486	7839532	8510497	7378913	7646371	115100	31490413	0.23	0.24	0.26	0.26	0.52	0.9196	0.1048	0.9038	1.9755	49430	498	517	1015	347514	298905	463295	452906	1608	1564228	0.23	0.2	0.29	0.29	0.58	0.8585	0.3068	0.7538	1.9265	4	4524041	5036458	4250182	4450454	61292	18322427	0.21	0.24	0.27	0.28	0.01	0.55	0.8805	0.2564	0.7888	1.9225	0	179	210	389	76090	69244	80393	80148	305875	0.26	0.22	0.26	0.26	0.52	0.8693	0.2883	0.7669	1.9441	1	921092	962506	717086	722287	13700	3336671	0.25	0.27	0.24	0.24	0.48	0.9012	0.1681	0.8548	1.9628	6	5	11	137	186	223	271	817	0.17	0.23	0.27	0.33	0.6	0.8781	0.2495	0.7817	1.9554	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9680	12045	2824	6003	9357	16900	10159	3741	10497	11181	4689	8758	7944	5556	5832	7465	6985	13360	8790	4792	19637	4950	10604	5315	16125	10780	3291	5572	2613	10454	7934	6173	7059	2803	8230	10171	9279	15660	5288	16902	12094	7451	6726	13522	9509	3541	11545	9760	5592	5380	4096	7251	2746	12353	10729	11542	1316	8674	8514	3397	6077	1449	5891	3819
GCF_006229205.1	NC_043716	NC_043716.1	Suricata suricatta isolate VVHF042 chromosome 17; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	15413652	15394160	13787381	13790255	206000	58591448	0.26	0.26	0.24	0.24	0.47	0.9516	0.0007	0.9993	1.9958	767	780	1547	8596376	9405997	8099034	8431856	93300	34626563	0.23	0.24	0.26	0.26	0.52	0.9176	0.1073	0.9018	1.9732	7812	506	555	1061	405022	342648	507174	502000	1116	1757960	0.24	0.2	0.28	0.28	0.56	0.861	0.31	0.7508	1.932	1	6139354	6860116	5557977	5835796	65484	24458727	0.21	0.25	0.26	0.27	0.01	0.53	0.8833	0.2268	0.8094	1.9298	0	217	181	398	69671	65935	78346	75781	289733	0.25	0.22	0.26	0.26	0.53	0.8693	0.2699	0.7799	1.9474	0	567131	577597	495893	500905	4700	2146226	0.24	0.26	0.25	0.25	0.5	0.8941	0.188	0.8396	1.9619	18	22	40	549	682	741	971	2943	0.19	0.23	0.25	0.33	0.58	0.8872	0.2423	0.7892	1.964	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10952	15101	3076	6361	10572	19989	11417	4923	11802	12267	5073	11348	8310	5836	6125	8670	8016	13822	9791	6005	22594	5764	12240	6819	19427	11941	4047	6379	3613	11676	9610	7091	7866	3120	8471	12067	9740	15915	6396	18165	13493	7464	8792	14390	11208	4504	11669	10174	6416	6451	4436	7443	3015	12132	10900	12886	1717	8997	8441	3627	7944	2010	7260	4661
GCF_006229205.1	NC_043717	NC_043717.1	Suricata suricatta isolate VVHF042 chromosome X; meerkat_22Aug2017_6uvM2_HiC; whole genome shotgun sequence.	33007981	33009185	22504636	22567508	386900	111476210	0.3	0.3	0.2	0.2	0.4	0.9473	0.0014	0.9986	1.9723	484	426	910	10288502	11375260	7482093	7716629	87900	36950384	0.26	0.28	0.22	0.23	0.46	0.9195	0.1155	0.895	1.9724	6574	352	310	662	290805	244927	279302	285723	55	1100812	0.27	0.23	0.24	0.26	0.5	0.8653	0.3033	0.7557	1.9455	0	7806940	8710092	5569285	5737455	64845	27888617	0.25	0.29	0.22	0.23	0	0.45	0.8956	0.1973	0.8327	1.944	0	111	97	208	32906	33184	28932	29191	124213	0.28	0.25	0.23	0.24	0.48	0.8689	0.2831	0.7709	1.947	0	528908	556905	376206	383678	4300	1849997	0.27	0.29	0.21	0.22	0.43	0.9046	0.1559	0.8641	1.9583	2	5	7	87	136	119	169	511	0.17	0.27	0.23	0.33	0.56	0.8888	0.393	0.68	1.9549	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8527	10235	2859	5111	6660	10435	6893	5150	6326	7051	5535	9711	6071	2548	4845	5690	5930	7932	6277	5640	11610	3861	6542	6194	11050	6317	3328	5541	3682	7464	5832	5430	4529	3245	6338	6390	5291	6996	4086	8572	7007	3011	8512	6744	5450	3846	5657	7663	4445	4782	2185	2886	3119	7394	6024	8385	1493	3447	3596	2109	6357	1998	4983	2414