GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_N Number of 'N' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_026212465.1	NC_080047	NC_080047.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 1; ASM2621246v1; whole genome shotgun sequence.	15873861	15582799	6789683	7059344	140294	45445981	0.35	0.34	0.15	0.16	0.3	0.94	0.0287	0.9717	1.8866	1312	1354	2666	4598166	5107695	2338301	2604768	700	14649630	0.32	0.34	0.16	0.18	0.35	0.8946	0.1886	0.84	1.9008	22613	1138	1184	2322	918868	885010	579780	702395	3086053	0.3	0.29	0.19	0.23	0.42	0.8733	0.3027	0.7558	1.9433	5	2500641	2983481	1233996	1357787	500	8076405	0.28	0.4	0.15	0.17	0.32	0.8642	0.3102	0.7497	1.8628	97	78	175	67054	79090	39843	43524	229511	0.29	0.32	0.19	0.2	0	0.39	0.8786	0.2902	0.7655	1.9289	0	73657	92811	35589	43538	245595	0.28	0.41	0.14	0.17	0	0.31	0.8569	0.3641	0.7094	1.8449	31	36	67	1012	1225	1237	1619	5093	0.2	0.24	0.24	0.32	0.56	0.8853	0.2553	0.7832	1.9665	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	27069	28990	12097	17448	18079	22962	23210	27494	11549	16307	30563	33689	20812	5338	16326	16083	22934	15140	17764	27826	12480	18306	11419	33067	14350	9953	11450	25978	18571	20673	15131	24089	9630	16030	17250	12087	8588	6820	11173	8985	11175	3731	33959	8992	11040	24433	11574	20445	14693	17699	7401	5284	18027	16597	13691	15322	5076	4606	5590	7033	25253	7314	11175	7679
GCF_026212465.1	NC_080048	NC_080048.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 2; ASM2621246v1; whole genome shotgun sequence.	13643786	14233568	6678832	6440823	161430	41158439	0.33	0.35	0.16	0.16	0.32	0.9382	0.0393	0.9615	1.9023	1091	1061	2152	3776316	4339938	2007440	2224822	31149	12379665	0.3	0.34	0.17	0.19	0.36	0.907	0.1627	0.855	1.9249	26245	934	942	1876	746549	713004	468306	569065	2496924	0.3	0.28	0.19	0.23	0.42	0.8718	0.3052	0.7542	1.9446	2	2195534	2650116	1101213	1191266	31149	7169278	0.28	0.39	0.15	0.17	0.32	0.8659	0.3066	0.7518	1.8663	127	95	222	66643	73964	39250	42715	222572	0.29	0.31	0.19	0.2	0	0.4	0.8749	0.3107	0.7517	1.9271	0	92530	112024	43585	50952	299091	0.29	0.41	0.14	0.16	0	0.3	0.8586	0.3233	0.7416	1.8357	23	16	39	561	700	725	911	2897	0.19	0.24	0.25	0.32	0.57	0.8832	0.2608	0.7804	1.9646	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21584	24233	9693	13687	14287	19232	18061	22521	9255	13934	23614	27174	16944	4353	13109	12941	17797	12506	14198	22273	9672	14218	9285	27124	11249	8208	9636	21166	15109	16144	12439	19154	7421	13022	14217	9882	7228	5978	9082	7150	8998	2972	27580	7011	8545	19700	9376	17036	12134	14673	6077	4251	14903	13246	11485	12697	4388	3785	4571	5808	20570	5746	9250	6109
GCF_026212465.1	NC_080049	NC_080049.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 3; ASM2621246v1; whole genome shotgun sequence.	12855143	12516581	5846132	6060273	61086	37339215	0.34	0.34	0.16	0.16	0.32	0.9264	0.0313	0.9692	1.9028	1100	1023	2123	3504303	3985967	1864586	2057744	300	11412900	0.31	0.34	0.17	0.19	0.35	0.9062	0.1586	0.8584	1.9239	13094	1015	923	1938	752219	730807	476657	563710	2523393	0.3	0.29	0.19	0.23	0.42	0.8722	0.3036	0.7554	1.9437	2	2007525	2383713	995687	1084797	300	6472022	0.29	0.4	0.15	0.17	0.32	0.864	0.3049	0.7534	1.8625	59	80	139	47208	51385	27165	28010	153768	0.29	0.32	0.19	0.2	0	0.39	0.8715	0.3152	0.7492	1.922	0	60726	72793	29651	36977	200147	0.29	0.41	0.14	0.17	0	0.3	0.8548	0.3457	0.725	1.8353	13	17	30	415	534	563	731	2243	0.19	0.24	0.25	0.33	0.58	0.8857	0.2926	0.753	1.9615	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21708	23743	9643	14599	14261	18526	17940	22694	9513	13618	24806	26998	17584	4301	13183	13089	19626	12188	14576	22946	10107	14515	9754	26528	11551	8173	9752	21798	15156	15956	12602	20312	7605	13794	14657	9442	7322	5680	9530	7095	8906	2920	27714	6804	8822	19270	9473	16374	12372	15361	6058	4173	15895	13588	11181	13091	4484	3581	4362	5694	20805	5740	9048	5951
GCF_026212465.1	NC_080050	NC_080050.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 4; ASM2621246v1; whole genome shotgun sequence.	11414037	11927300	5604062	5483401	66691	34495491	0.33	0.35	0.16	0.16	0.32	0.9313	0.0329	0.9677	1.9054	1361	1240	2601	3122734	3594784	1696929	1884699	100	10299246	0.28	0.3	0.2	0.22	0.42	0.9054	0.1311	0.8819	1.9438	6610	822	809	1631	649690	627728	416046	499249	2192713	0.3	0.29	0.19	0.23	0.42	0.872	0.3039	0.7554	1.9455	4	1778595	2152473	899635	984180	100	5814983	0.28	0.4	0.15	0.17	0.32	0.8654	0.3121	0.7482	1.8657	61	80	141	37134	41354	21833	23563	123884	0.29	0.32	0.19	0.2	0	0.39	0.8749	0.3203	0.7439	1.9262	0	44651	55264	20047	26453	146415	0.29	0.41	0.13	0.16	0	0.29	0.8492	0.3734	0.7057	1.8233	10	13	23	365	413	423	517	1718	0.21	0.24	0.25	0.3	0.55	0.8718	0.2028	0.8248	1.9743	460	334	794	20830	19644	26254	27757	0	94485	0.22	0.21	0.28	0.29	0	0.57	0.9033	0.0576	0.9445	1.9844	19052	20839	8638	12596	12718	16308	16456	19623	8385	11810	21232	23895	15141	3788	11519	11135	17099	11041	12477	19428	8770	12897	7777	23389	10125	7192	8139	18471	13140	14354	10627	16823	6738	10889	12142	8303	6303	5235	8144	6500	7647	2576	24370	6283	7469	17602	8492	14467	10253	12869	5562	3754	12699	12356	10065	11573	3588	3353	4249	5081	17778	4577	7665	5238
GCF_026212465.1	NC_080051	NC_080051.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 5; ASM2621246v1; whole genome shotgun sequence.	11279275	10561766	4942490	5348462	92871	32224864	0.35	0.33	0.15	0.17	0.32	0.9178	0.0723	0.9302	1.9025	838	850	1688	2746320	3139787	1467687	1644612	100	8998506	0.3	0.34	0.17	0.19	0.36	0.9068	0.1622	0.8555	1.9259	13412	745	789	1534	595006	572574	375187	454303	1997070	0.3	0.29	0.19	0.23	0.42	0.8719	0.3082	0.7526	1.9436	0	1547487	1860709	770545	858016	100	5036857	0.28	0.4	0.15	0.17	0.32	0.8644	0.3116	0.7485	1.8636	61	45	106	44760	50075	25491	26927	147253	0.29	0.33	0.19	0.19	0	0.38	0.8716	0.3192	0.7467	1.9165	0	68588	81288	33202	40014	223092	0.28	0.41	0.14	0.17	0	0.31	0.8621	0.361	0.7161	1.8449	20	13	33	476	597	605	785	2463	0.19	0.24	0.24	0.32	0.57	0.8874	0.2691	0.7739	1.9637	1	1	2	65	72	63	73	0	273	0.24	0.26	0.23	0.27	0	0.5	0.887	0.1194	0.8884	1.9966	17764	19333	7856	11167	11655	14557	14848	17818	7528	10911	19450	21506	13868	3453	10381	10326	14812	10257	11630	17816	7993	11629	7669	21040	9380	6588	7592	16714	11910	13111	9999	15468	6099	10297	11241	7544	5636	4320	7256	5835	7266	2266	22040	5664	7010	15683	7606	13344	9582	11505	4836	3395	11781	10771	9168	10037	3618	2947	3497	4403	16264	4630	7294	4701
GCF_026212465.1	NC_080052	NC_080052.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 6; ASM2621246v1; whole genome shotgun sequence.	10830441	10956868	5232467	5098561	58926	32177263	0.34	0.34	0.16	0.16	0.32	0.9206	0.0188	0.9814	1.9053	777	1778	2555	3101792	3454642	1621639	1780295	18278	9976646	0.27	0.29	0.21	0.23	0.44	0.9046	0.1163	0.8947	1.9481	11346	695	724	1419	554734	536328	351169	421188	1863419	0.3	0.29	0.19	0.23	0.42	0.8715	0.3045	0.7546	1.9443	0	1583248	1866456	772594	849685	0	5071983	0.29	0.39	0.15	0.17	0.32	0.8646	0.2974	0.7591	1.8626	51	56	107	31043	35851	17491	18471	102856	0.29	0.33	0.19	0.19	0	0.38	0.8697	0.3293	0.7393	1.9147	0	39332	48705	18672	22032	128741	0.28	0.42	0.13	0.17	0	0.3	0.8507	0.3772	0.702	1.8284	19	15	34	521	615	599	786	2521	0.2	0.25	0.24	0.31	0.55	0.8896	0.2671	0.7748	1.9684	0	974	974	25439	24469	32012	33985	0	115905	0.22	0.21	0.28	0.29	0	0.57	0.9021	0.0515	0.9502	1.9853	16268	17631	7402	10484	10795	13450	13754	16556	7108	10300	17933	19861	12919	3178	9561	9703	13842	9194	10715	16737	7437	10858	6866	19146	8277	6174	7101	16164	11149	12231	9425	14408	5682	10063	10440	6813	5300	4323	6823	5291	6694	2150	20767	5242	6743	14700	7083	12564	9168	10817	4456	3095	11174	10317	8278	9755	3450	2713	3347	4167	15190	4494	6958	4419
GCF_026212465.1	NC_080053	NC_080053.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 7; ASM2621246v1; whole genome shotgun sequence.	10921834	10610406	5016527	5217781	109707	31876255	0.34	0.33	0.16	0.16	0.32	0.9279	0.0341	0.9665	1.9049	1804	745	2549	2783711	3207494	1510485	1697152	400	9199242	0.27	0.29	0.21	0.23	0.44	0.9063	0.1205	0.891	1.9498	2547	731	667	1398	546203	525951	347482	421809	1841445	0.29	0.29	0.19	0.23	0.42	0.8718	0.3023	0.7561	1.9462	0	1660973	2000432	837028	930556	400	5429389	0.28	0.4	0.15	0.17	0.32	0.8659	0.3151	0.746	1.8671	52	58	110	32395	37480	19492	20272	109639	0.29	0.32	0.19	0.2	0	0.39	0.8748	0.2951	0.7611	1.929	0	41698	49988	18190	22470	132346	0.28	0.41	0.14	0.17	0	0.31	0.8579	0.3791	0.7011	1.8423	11	15	26	346	478	469	617	1910	0.18	0.25	0.25	0.32	0.57	0.8791	0.3202	0.7365	1.9544	1001	0	1001	26028	25066	32961	35062	0	119117	0.22	0.21	0.28	0.29	0	0.57	0.9045	0.0508	0.9506	1.9848	16180	17911	7051	10323	10587	13744	13885	16301	7196	10540	17127	19719	12343	3317	9587	9419	13383	9118	10587	16383	7270	10662	6864	19347	8725	6078	6874	15402	11023	12121	9212	14062	5713	9630	10196	7173	5289	4351	6630	5473	6838	2274	20243	5124	6746	14695	6954	12325	8962	10597	4462	3015	10567	9863	8512	9166	3422	2794	3313	4385	14925	4145	7000	4556
GCF_026212465.1	NC_080054	NC_080054.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 8; ASM2621246v1; whole genome shotgun sequence.	10157061	10446908	5537253	5471808	79447	31692477	0.32	0.33	0.17	0.17	0.35	0.9104	0.02	0.9802	1.9312	1329	1334	2663	2862057	3160890	1763308	2034790	500	9821545	0.27	0.29	0.2	0.23	0.43	0.9084	0.1459	0.8685	1.9546	7054	648	712	1360	513436	496562	327875	390767	1728640	0.3	0.29	0.19	0.23	0.42	0.8725	0.3037	0.7557	1.9443	0	1308668	1562322	655890	723984	200	4251064	0.28	0.39	0.15	0.17	0.32	0.8648	0.31	0.7499	1.8663	48	63	111	39844	45427	23159	25247	133677	0.29	0.33	0.19	0.2	0	0.38	0.872	0.3269	0.7423	1.9146	0	57150	65376	26711	30853	180090	0.3	0.41	0.13	0.16	0	0.29	0.8552	0.3581	0.7162	1.8261	15	5	20	299	371	367	472	1509	0.2	0.25	0.25	0.31	0.56	0.8779	0.2631	0.7774	1.9639	604	549	1153	483486	451830	485362	613302	300	2034280	0.24	0.23	0.24	0.29	0	0.53	0.9105	0.1275	0.8831	1.9902	14993	16163	6610	9791	9743	12631	12550	15170	6598	9326	16681	18561	11942	3016	8911	9070	13254	8386	10004	15678	6969	9742	6502	18395	8027	5746	6697	14743	10395	11478	8562	13565	5189	8747	9709	6647	5248	4049	6374	4951	6288	2072	18828	4979	6072	13459	6583	11744	8325	10179	4277	2899	10325	9447	7794	8599	3056	2643	3069	4070	14269	3970	6491	4248
GCF_026212465.1	NC_080055	NC_080055.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 9; ASM2621246v1; whole genome shotgun sequence.	10439637	9992949	4604524	4908944	135851	30081905	0.35	0.33	0.15	0.16	0.32	0.9199	0.0539	0.9476	1.8993	734	669	1403	2498582	2885162	1342271	1466550	600	8193165	0.31	0.34	0.17	0.19	0.35	0.9048	0.1634	0.8556	1.9218	8271	655	619	1274	508745	488494	325717	386986	1709942	0.3	0.29	0.19	0.23	0.42	0.8711	0.3016	0.7566	1.9453	4	1520032	1852169	772425	827016	600	4972242	0.29	0.39	0.15	0.17	0.32	0.8653	0.3051	0.7536	1.8653	56	32	88	22478	25025	12789	13533	73825	0.29	0.33	0.19	0.19	0	0.38	0.8754	0.287	0.7695	1.9199	67	37512	45950	19676	22513	125651	0.28	0.42	0.13	0.16	0	0.3	0.8536	0.3706	0.7093	1.8241	11	13	24	372	435	440	559	1806	0.2	0.24	0.24	0.31	0.56	0.884	0.2415	0.7944	1.9696	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14840	16315	6617	9719	9873	12524	12539	15320	6463	9177	16269	18112	11770	3198	8799	8916	12433	8391	9768	15209	6713	9687	6357	17986	7788	5762	6605	14322	10203	10951	8538	13258	5323	9094	9729	6428	4878	4059	6213	5004	6187	1993	18994	4894	6121	13385	6643	11314	8326	9866	4343	3071	10158	9595	7565	8904	3023	2650	3450	3912	14299	3827	6105	4350
GCF_026212465.1	NC_080056	NC_080056.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 10; ASM2621246v1; whole genome shotgun sequence.	10051861	9812852	4702273	4818896	95113	29480995	0.34	0.33	0.16	0.16	0.32	0.9383	0.0243	0.976	1.9071	720	714	1434	2421324	2771279	1298292	1454413	16069	7961377	0.3	0.34	0.17	0.19	0.36	0.9062	0.163	0.8546	1.9248	13028	652	648	1300	518062	491781	321534	396263	1727640	0.3	0.28	0.18	0.23	0.42	0.8715	0.3111	0.7505	1.9437	1	1383027	1656169	694262	767466	16069	4516993	0.28	0.39	0.15	0.17	0.32	0.8655	0.3082	0.7509	1.8677	50	48	98	33307	36992	19495	19775	109569	0.29	0.32	0.19	0.2	0	0.38	0.8701	0.3079	0.7543	1.9186	0	50262	60741	24325	28280	163608	0.28	0.42	0.13	0.16	0	0.3	0.8527	0.3819	0.7003	1.8217	8	8	16	244	269	283	376	1172	0.21	0.23	0.24	0.32	0.56	0.8902	0.2792	0.7602	1.9707	1	3	4	116	118	131	150	0	515	0.22	0.23	0.26	0.29	0	0.55	0.8899	0.1147	0.8931	1.9875	15238	17272	6531	9656	9971	13082	12842	15297	6374	9486	16869	18992	11791	3021	9228	8922	12518	8687	9554	15192	6774	9944	6163	18820	7827	5612	6382	14470	10418	11494	8383	13093	5223	9002	9843	6567	4837	3930	6168	4961	6363	1976	19158	4873	6176	13739	6803	11827	8290	9903	4284	2874	10223	9367	8108	8560	2940	2616	3029	3825	14173	4018	6361	4155
GCF_026212465.1	NC_080057	NC_080057.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 11; ASM2621246v1; whole genome shotgun sequence.	10113782	8721629	4211588	4184220	35113	27266332	0.37	0.32	0.15	0.15	0.31	0.9157	0.0772	0.9279	1.8879	666	745	1411	1987748	2225418	1075108	1211773	0	6500047	0.3	0.33	0.17	0.2	0.37	0.9059	0.1682	0.8506	1.932	4999	564	644	1208	453296	437416	287573	347974	1526259	0.29	0.29	0.19	0.23	0.42	0.8733	0.3022	0.7566	1.9459	0	1064431	1242742	525428	585464	0	3418065	0.28	0.39	0.15	0.17	0.32	0.8649	0.3115	0.749	1.8672	51	38	89	35799	38581	19532	20099	114011	0.3	0.32	0.19	0.19	0	0.38	0.872	0.302	0.7584	1.9173	0	33994	42721	15073	19790	111578	0.29	0.42	0.13	0.16	0	0.29	0.8458	0.3916	0.6911	1.8139	40	23	63	1028	1191	1124	1424	4767	0.22	0.25	0.24	0.3	0.53	0.8892	0.2077	0.8183	1.9769	0	25	25	10195	9528	10229	12928	0	42880	0.24	0.23	0.24	0.29	0	0.53	0.9095	0.1267	0.8838	1.9904	13330	14314	6266	8654	8599	11224	11499	14024	5826	8228	14821	16708	9959	2720	7900	7811	11268	7456	8863	13726	5709	9159	5771	16057	6953	5021	5908	12944	9454	10358	7809	11632	4629	7931	8435	5650	4320	3616	5438	4480	5431	1850	16832	4330	5115	12044	6156	10144	7050	8931	3981	2726	9124	8254	6957	7495	2432	2439	2879	3517	12651	3244	5122	4058
GCF_026212465.1	NC_080058	NC_080058.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 12; ASM2621246v1; whole genome shotgun sequence.	8820590	9336870	4119419	4013212	57344	26347435	0.33	0.35	0.16	0.15	0.31	0.9393	0.0415	0.9595	1.891	674	655	1329	2259915	2584895	1197741	1343025	400	7385976	0.31	0.34	0.17	0.19	0.36	0.9063	0.1667	0.852	1.9245	10971	612	612	1224	481736	458655	299807	369044	1609242	0.29	0.29	0.19	0.23	0.42	0.872	0.3091	0.7517	1.9453	1	1270370	1531996	632314	696338	300	4131318	0.29	0.39	0.15	0.17	0.32	0.865	0.3055	0.7526	1.8667	42	34	76	40104	48989	23254	24492	136839	0.31	0.32	0.18	0.19	0	0.37	0.8723	0.3003	0.7559	1.9141	0	41746	52555	19334	22393	136028	0.29	0.43	0.13	0.15	0	0.28	0.8428	0.3584	0.7181	1.7915	14	5	19	260	351	360	479	1450	0.18	0.24	0.25	0.33	0.58	0.8832	0.321	0.7343	1.9513	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14413	16044	6270	9100	9255	12590	11605	14365	5929	8832	15335	17492	10818	2817	8227	8478	11706	8208	9070	14255	6359	9478	5814	17673	7369	5107	6149	13533	9863	10591	7790	12251	4829	8352	9057	6269	4487	3766	5730	4601	5788	1860	17956	4659	5637	12762	6237	10824	7851	9115	3935	2527	9367	8669	7599	8260	2873	2352	2821	3490	13187	3601	5610	3870
GCF_026212465.1	NC_080059	NC_080059.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 13; ASM2621246v1; whole genome shotgun sequence.	8658407	9106580	4326827	4114366	17448	26223628	0.33	0.35	0.16	0.16	0.32	0.9403	0.0504	0.9508	1.9059	688	768	1456	2549553	2917958	1363802	1519852	300	8351465	0.3	0.34	0.17	0.19	0.36	0.9075	0.1587	0.8584	1.926	3550	625	696	1321	529641	512592	339890	408808	1790931	0.29	0.29	0.19	0.23	0.42	0.8718	0.3036	0.756	1.9456	0	1467642	1758900	734857	807218	300	4768917	0.28	0.4	0.15	0.17	0.32	0.8659	0.3047	0.7533	1.8663	40	37	77	32419	36928	18184	19928	107459	0.29	0.33	0.19	0.2	0	0.38	0.8724	0.3021	0.7574	1.9204	0	52555	60954	26572	29737	169818	0.3	0.4	0.14	0.17	0	0.3	0.8631	0.3214	0.7432	1.8429	15	29	44	612	866	753	1008	3239	0.19	0.27	0.23	0.31	0.54	0.8915	0.3304	0.7316	1.9616	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15619	17150	7033	10278	10480	13353	13433	15582	7029	9820	16835	19090	12248	3078	9317	9198	13478	8810	10496	15703	7603	10216	6712	18733	8422	5669	6843	15189	10512	11904	9128	13809	5619	9163	10056	6850	5232	4095	6429	5379	6625	2156	19375	5099	6546	14340	6803	11984	8604	10506	4275	3061	10413	9883	8241	8941	3015	2750	2999	4102	14476	4001	6847	4470
GCF_026212465.1	NC_080060	NC_080060.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 14; ASM2621246v1; whole genome shotgun sequence.	8495659	8863616	4200952	3969250	54706	25584183	0.33	0.35	0.16	0.16	0.32	0.9383	0.0496	0.9517	1.903	660	622	1282	2199345	2487419	1161824	1297237	5001	7150826	0.3	0.34	0.17	0.19	0.36	0.9064	0.1599	0.8574	1.9268	1200	600	557	1157	438943	420931	274793	336953	1471620	0.3	0.29	0.19	0.23	0.42	0.8717	0.3047	0.7556	1.9445	0	1149931	1375698	572862	630175	200	3728866	0.28	0.39	0.15	0.17	0.32	0.8658	0.3075	0.7513	1.8668	40	47	87	31040	35033	18619	18937	103629	0.29	0.32	0.2	0.19	0	0.39	0.8731	0.3277	0.7393	1.9203	0	26935	33726	12192	16545	89398	0.28	0.41	0.14	0.17	0	0.3	0.8512	0.3946	0.6909	1.8326	12	10	22	331	377	403	501	1612	0.21	0.23	0.25	0.31	0.56	0.8905	0.2137	0.8162	1.9711	0	2	2	847	746	802	1002	0	3397	0.25	0.24	0.23	0.28	0	0.52	0.8979	0.1551	0.8572	1.9935	12906	14371	5841	8342	8616	11095	10998	13001	5537	7906	14180	15998	10025	2550	7760	7542	10709	7356	8162	13060	5495	8740	5331	16028	6736	4776	5578	12479	8807	9552	7269	11393	4395	7776	8071	5742	4159	3383	5288	4289	5506	1781	16416	4119	5155	11977	5780	9972	7269	8446	3648	2518	8702	7788	6692	7248	2546	2226	2590	3456	11924	3251	5235	3520
GCF_026212465.1	NC_080061	NC_080061.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 15; ASM2621246v1; whole genome shotgun sequence.	8058734	8518032	3941880	3779157	26307	24324110	0.33	0.35	0.16	0.16	0.32	0.9378	0.0488	0.9524	1.901	602	581	1183	2005616	2277792	1063825	1189478	400	6537111	0.3	0.34	0.17	0.19	0.36	0.9069	0.1604	0.8568	1.9275	8761	551	520	1071	416481	401004	263398	321206	1402089	0.29	0.29	0.19	0.23	0.42	0.8723	0.3043	0.7558	1.9449	0	1135808	1349635	564426	621050	400	3671319	0.29	0.39	0.15	0.17	0.32	0.8651	0.3036	0.7543	1.866	35	46	81	22978	24445	12703	13480	73606	0.3	0.32	0.19	0.2	0	0.39	0.8737	0.2845	0.7712	1.9245	0	36902	42114	15521	18776	113313	0.29	0.4	0.13	0.17	0	0.3	0.8573	0.3399	0.7244	1.8452	11	11	22	329	376	400	521	1626	0.2	0.23	0.25	0.32	0.57	0.8848	0.2342	0.7959	1.9709	1	0	1	30	23	32	34	0	119	0.25	0.19	0.27	0.29	0	0.55	0.8929	0.1624	0.8539	1.9854	12287	13683	5285	7984	8122	10310	10452	12311	5342	7880	13263	14936	9559	2347	7384	7341	10362	6991	8231	12253	5719	8371	5123	14890	6790	4598	5244	11892	8545	9067	6740	10620	4178	7217	7741	5444	4097	3222	5258	4100	5208	1723	15543	3987	5305	11068	5542	9500	7079	8152	3284	2312	7792	7541	6511	6930	2638	2005	2346	3160	11106	3320	5414	3297
GCF_026212465.1	NC_080062	NC_080062.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 16; ASM2621246v1; whole genome shotgun sequence.	7471183	8209701	3710060	3405641	86637	22883222	0.33	0.36	0.16	0.15	0.31	0.9269	0.0899	0.914	1.8924	636	549	1185	1793355	2017195	943150	1048089	300	5802089	0.3	0.33	0.17	0.2	0.37	0.9046	0.1651	0.8535	1.9273	9862	552	469	1021	411344	393923	256506	304274	1366047	0.3	0.29	0.19	0.23	0.42	0.8723	0.3017	0.7567	1.9436	927	1008484	1195194	494713	540135	300	3238826	0.29	0.39	0.15	0.17	0.32	0.8655	0.2983	0.7584	1.8617	20	31	51	25004	27742	12782	14248	79776	0.3	0.32	0.18	0.19	0	0.38	0.87	0.3329	0.7393	1.9101	0	20738	25554	8667	11691	66650	0.29	0.42	0.13	0.16	0	0.28	0.8499	0.3637	0.7125	1.8092	53	42	95	1533	1776	1690	2169	7168	0.21	0.25	0.24	0.3	0.54	0.8949	0.2204	0.8108	1.9723	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11783	12049	5582	7684	7499	9736	9585	12765	5211	7430	13711	15038	9111	2497	7205	7240	9933	6524	7977	12737	4933	7803	4859	14762	5727	4582	5468	11504	8811	8719	6875	10403	3943	7710	7887	5239	3918	3403	5052	3891	4432	1635	16013	3668	4330	10641	5296	9082	6254	8065	3696	2393	8425	7437	6034	6817	2354	2027	2545	3286	11542	2968	4575	3885
GCF_026212465.1	NC_080063	NC_080063.1	Amaranthus tricolor cultivar Red isolate AtriRed21 chromosome 17; ASM2621246v1; whole genome shotgun sequence.	7278608	6508740	3110619	3446627	92038	20436632	0.36	0.32	0.15	0.17	0.32	0.9317	0.1071	0.8984	1.9026	680	671	1351	2287086	2613785	1227101	1355756	12162	7495890	0.3	0.34	0.17	0.19	0.36	0.9069	0.1576	0.8589	1.9259	2803	595	625	1220	472931	459014	305804	363309	1601058	0.29	0.29	0.19	0.23	0.42	0.8722	0.3011	0.7566	1.9472	0	1371762	1630594	683126	745700	12162	4443344	0.28	0.4	0.15	0.17	0.32	0.8648	0.3152	0.7458	1.8626	57	32	89	29285	34539	17533	18876	100233	0.29	0.33	0.19	0.2	0	0.39	0.8739	0.32	0.745	1.9217	0	34768	40855	16270	19785	111678	0.29	0.41	0.14	0.17	0	0.3	0.8577	0.3506	0.723	1.8391	18	12	30	434	510	576	699	2219	0.19	0.23	0.26	0.32	0.58	0.8807	0.2233	0.8077	1.9658	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13431	14955	6196	9137	9433	11894	12404	14125	6327	8605	15435	17320	11124	2779	8231	8373	12465	7921	8959	14353	6198	9401	5925	16918	7276	5323	5955	13335	9549	10500	7884	12629	4842	7959	9031	6182	4456	3864	5867	4777	5882	1890	17483	4695	5651	12936	6200	10377	7607	9297	3991	2647	9304	9010	7070	8375	2618	2384	3060	3781	13001	3608	5927	3872
NA	NC_065013	NC_065013.1	Amaranthus tricolor chloroplast; complete genome.	47339	48279	28034	27066	0	150718	0.31	0.32	0.19	0.18	0.37	0.9344	0.0274	0.973	1.9471	52	81	133	32315	32175	19183	22515	0	106188	0.28	0.3	0.19	0.23	0.42	0.8946	0.2235	0.8073	1.9476	67	31	55	86	24532	25184	13842	15789	79347	0.31	0.32	0.17	0.2	0.38	0.8887	0.2467	0.7898	1.9336	67	1951	1818	854	1065	0	5688	0.34	0.32	0.15	0.19	0.34	0.8982	0.1396	0.7503	1.9159	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	17	20	37	600	693	656	820	2769	0.21	0.25	0.24	0.3	0.54	0.8742	0.2405	0.8005	1.9654	4	4	8	2373	1708	2157	2885	0	9123	0.26	0.2	0.23	0.31	0	0.54	0.9108	0.2891	0.7497	1.9776	618	382	511	531	373	311	609	1145	324	462	983	1030	414	134	421	308	562	209	530	1023	172	555	183	833	202	234	429	575	796	705	424	599	149	721	422	227	162	195	201	214	129	97	1097	178	81	520	299	438	229	451	222	147	893	417	182	299	51	120	161	350	718	64	31	391