GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_018687715.1	NC_056752	NC_056752.1	Carya illinoinensis cultivar Pawnee chromosome 1; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	18557419	18511123	10427690	10542887	20000	58059119	0.32	0.32	0.18	0.18	0.36	0.9452	0.0067	0.9933	1.9436	1756	1692	3448	4880591	5555760	3095496	3375248	10000	16917095	0.28	0.32	0.19	0.21	0.4	0.9141	0.1599	0.858	1.9556	44756	1500	1425	2925	1137237	1082939	830148	982503	4032827	0.28	0.27	0.2	0.24	0.45	0.875	0.2939	0.7619	1.9559	32	2613441	3148866	1544950	1653406	10000	8970663	0.28	0.39	0.16	0.17	0.34	0.8666	0.3112	0.7481	1.8836	0	222	239	461	120084	137698	82701	85818	426301	0.28	0.31	0.2	0.2	0	0.4	0.8767	0.3078	0.753	1.9337	56	139412	166084	76385	83905	465786	0.27	0.4	0.16	0.16	0	0.32	0.858	0.3542	0.7204	1.8543	22	19	41	560	728	755	970	3013	0.19	0.24	0.25	0.32	0.57	0.8931	0.276	0.7663	1.9624	0	1	1	28	28	30	33	119	0.24	0.24	0.25	0.28	0	0.53	0.9099	0.0476	0.9545	1.9966	34722	40602	13631	20365	26544	36149	27896	30905	19015	23927	31712	39108	25608	8214	19156	21558	26940	23833	26269	30983	21355	21846	20081	38158	23649	15259	14270	33791	20528	26821	20962	28416	15393	18802	21388	19792	13627	11970	15175	17002	17730	6386	36417	15920	16960	28238	18397	26123	16985	21738	10913	8364	16935	19480	21005	22518	5905	8299	8453	8219	28866	7363	14303	9285
GCF_018687715.1	NC_056753	NC_056753.1	Carya illinoinensis cultivar Pawnee chromosome 2; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	11954233	11999873	6730336	6782139	10000	37476581	0.32	0.32	0.18	0.18	0.36	0.9435	0.0057	0.9943	1.9431	1198	1089	2287	3063508	3517431	1948062	2124010	0	10653011	0.28	0.32	0.19	0.21	0.4	0.9141	0.1633	0.8552	1.9551	8157	1015	913	1928	722345	684991	531349	627479	2566164	0.28	0.27	0.2	0.24	0.45	0.8742	0.2978	0.7592	1.9542	40	1662066	2021573	976950	1049000	0	5709589	0.27	0.39	0.16	0.17	0.34	0.8669	0.3159	0.7446	1.8838	0	157	150	307	75839	87233	51906	51187	266165	0.28	0.32	0.2	0.2	0	0.4	0.8759	0.3122	0.7484	1.9342	0	86630	102794	49186	53679	292289	0.27	0.4	0.16	0.17	0	0.33	0.8585	0.3488	0.7252	1.8616	17	16	33	434	586	625	772	2417	0.18	0.24	0.26	0.32	0.58	0.8934	0.2672	0.7738	1.9621	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	22105	26055	8524	12888	16770	22965	18016	19195	12094	14784	20030	24976	16374	5191	12056	13695	17303	15095	16373	19409	13864	14301	12760	24113	15545	9857	8819	21262	12791	17361	13278	18067	9766	11689	13392	12537	8701	7760	9577	11054	11577	4157	22931	10633	10846	17770	11823	16689	10663	13832	7049	5142	10598	12868	13257	14257	3769	5207	5466	5275	18578	4752	9447	5719
GCF_018687715.1	NC_056754	NC_056754.1	Carya illinoinensis cultivar Pawnee chromosome 3; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	17985980	18063269	10381471	10177859	81	56608660	0.32	0.32	0.18	0.18	0.36	0.9474	0.012	0.9881	1.9453	1596	1616	3212	4154357	4737673	2645757	2890605	0	14428392	0.28	0.32	0.19	0.21	0.4	0.9136	0.1617	0.8565	1.9554	10022	1355	1372	2727	1045129	998745	764419	899928	3708221	0.28	0.27	0.2	0.24	0.44	0.8751	0.2977	0.759	1.9549	8	2168208	2627776	1279983	1367565	0	7443532	0.28	0.39	0.16	0.17	0.34	0.8657	0.312	0.7476	1.8834	0	214	213	427	105600	122125	72530	73156	373411	0.28	0.31	0.2	0.2	0	0.4	0.8763	0.3145	0.7486	1.9304	33	110758	135191	62223	67233	375405	0.27	0.4	0.16	0.16	0	0.32	0.8571	0.3693	0.7125	1.8522	19	13	32	445	573	602	767	2387	0.18	0.24	0.25	0.32	0.58	0.8677	0.2978	0.7543	1.9549	0	1	1	36	36	39	45	156	0.23	0.23	0.25	0.29	0	0.54	0.8747	0.0714	0.9333	1.9937	31905	36849	12620	18353	24457	33308	25720	28344	17706	21910	29643	36582	23525	7491	17762	20684	25027	21679	24087	28700	19701	19952	19308	34700	21632	14005	13202	31344	19215	24745	19197	26875	14118	17347	19461	18507	12584	10885	14084	15766	16445	5853	33083	14880	15322	26048	17310	24070	15600	19859	9750	7281	15671	18168	18839	20295	5177	7081	7437	7403	26658	6554	12495	8226
GCF_018687715.1	NC_056755	NC_056755.1	Carya illinoinensis cultivar Pawnee chromosome 4; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	14291590	14311293	8196553	8162032	0	44961468	0.32	0.32	0.18	0.18	0.36	0.9468	0.0028	0.9972	1.9458	1149	1138	2287	2961834	3361693	1870288	2021918	0	10215733	0.28	0.32	0.19	0.2	0.39	0.9133	0.1598	0.858	1.9548	14303	952	957	1909	700730	667740	507911	600556	2476937	0.28	0.27	0.2	0.24	0.44	0.8742	0.2979	0.7592	1.9546	0	1599448	1911221	940614	991865	0	5443148	0.28	0.39	0.16	0.17	0.34	0.8656	0.3112	0.7484	1.8823	0	178	161	339	78298	88698	54046	52712	273754	0.28	0.31	0.21	0.2	0	0.4	0.879	0.2956	0.7602	1.9375	0	83330	101325	47372	50956	282983	0.27	0.4	0.16	0.17	0	0.33	0.8626	0.3489	0.7262	1.8646	11	13	24	336	430	453	577	1796	0.18	0.24	0.26	0.32	0.58	0.863	0.319	0.7394	1.9503	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21343	25244	8476	12267	16316	21755	16945	18763	11512	14917	20197	24155	15699	5008	11874	13900	16854	14356	16146	19598	12882	13351	12359	23160	14567	9484	8784	21088	12841	16591	12625	17578	9109	11627	12981	12008	8195	7353	9151	10359	10845	3649	22229	10101	10252	17181	11514	16121	10497	13327	6546	4883	10754	12319	12691	14031	3839	4649	5063	4818	17915	4379	8717	5439
GCF_018687715.1	NC_056756	NC_056756.1	Carya illinoinensis cultivar Pawnee chromosome 5; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	15869944	15840583	8967315	8980741	50046	49708629	0.32	0.32	0.18	0.18	0.36	0.9464	0.0017	0.9983	1.9434	1465	1599	3064	4018086	4553300	2559256	2770941	20000	13921583	0.28	0.32	0.19	0.21	0.4	0.914	0.1563	0.8605	1.955	8003	1229	1261	2490	955244	921615	696251	822675	3395785	0.28	0.27	0.2	0.24	0.44	0.8749	0.2964	0.7603	1.9545	8	2152080	2562801	1271380	1327683	10000	7323944	0.28	0.39	0.16	0.17	0.34	0.8664	0.3091	0.7497	1.8834	0	196	195	391	113577	128847	75878	76252	394554	0.29	0.31	0.2	0.2	0	0.4	0.8748	0.3183	0.746	1.9291	67	121036	147543	66937	72328	407844	0.27	0.4	0.16	0.17	0	0.33	0.8618	0.3561	0.7193	1.8645	23	16	39	564	699	725	928	2916	0.19	0.24	0.25	0.32	0.57	0.8843	0.2623	0.7763	1.9672	2	110	112	44649	41054	44563	56578	186844	0.24	0.22	0.24	0.29	0	0.54	0.9085	0.1276	0.883	1.9891	29315	34505	11333	17054	21271	30150	22975	25646	16405	20423	27003	33054	21315	6803	16372	18574	23524	19829	22121	26746	18009	18119	17050	31891	19779	12542	11999	29551	17750	22261	17711	24294	12644	16166	17585	16757	11522	10024	13109	13970	14655	5292	30481	13337	14482	23613	15501	21570	14847	18064	9485	6740	14818	16892	17340	18445	5196	6804	6967	6819	24064	6328	12159	7632
GCF_018687715.1	NC_056757	NC_056757.1	Carya illinoinensis cultivar Pawnee chromosome 6; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	11868554	11777857	6750627	6807233	0	37204271	0.32	0.32	0.18	0.18	0.36	0.9405	0.008	0.992	1.9463	1011	1025	2036	2637310	3013364	1670384	1818689	0	9139747	0.28	0.32	0.19	0.2	0.4	0.9133	0.1646	0.8539	1.9544	14859	844	842	1686	617281	595289	459870	536625	2209065	0.28	0.27	0.2	0.24	0.45	0.8749	0.2966	0.7596	1.9549	0	1406435	1692570	821480	878472	0	4798957	0.28	0.39	0.16	0.17	0.34	0.8668	0.3118	0.7477	1.8831	0	148	156	304	66920	77236	45608	47677	237441	0.28	0.31	0.2	0.21	0	0.41	0.875	0.3165	0.7455	1.9344	0	80727	97245	44800	48336	271108	0.27	0.4	0.16	0.17	0	0.33	0.8617	0.3479	0.7249	1.8612	13	17	30	430	520	565	711	2226	0.19	0.23	0.25	0.32	0.57	0.8883	0.2347	0.7952	1.9686	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18889	21853	7236	11190	14233	20069	15378	16415	10742	12768	17394	21341	13965	4425	10515	11980	15756	12845	14691	17114	11921	11863	11527	20909	13250	8387	7445	18424	11216	14562	11551	15822	8342	10189	11175	10679	7499	6756	8135	9302	9647	3550	19682	9121	9269	15559	10259	14295	9419	12007	6041	4460	9154	11381	11392	12408	3010	4442	4826	4528	15666	3809	7531	4951
GCF_018687715.1	NC_056758	NC_056758.1	Carya illinoinensis cultivar Pawnee chromosome 7; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	14145011	14030843	7907392	8118263	10000	44211509	0.32	0.32	0.18	0.18	0.36	0.9463	0.0172	0.983	1.9446	1306	1358	2664	3658059	4214717	2336178	2545889	0	12754843	0.28	0.32	0.19	0.21	0.4	0.915	0.1574	0.8595	1.9564	8770	1131	1163	2294	903649	866868	662869	782656	3216042	0.28	0.27	0.2	0.24	0.44	0.8741	0.2987	0.7587	1.9552	0	2014413	2464636	1194605	1270268	0	6943922	0.27	0.39	0.16	0.17	0.33	0.8655	0.3196	0.7421	1.8811	0	152	168	320	77375	88619	51440	53336	270770	0.28	0.31	0.2	0.2	0	0.4	0.8795	0.3036	0.7541	1.9352	91	85699	101516	48636	52712	288563	0.27	0.4	0.16	0.17	0	0.33	0.8634	0.3387	0.7319	1.8678	13	19	32	446	557	600	757	2360	0.19	0.24	0.25	0.32	0.58	0.889	0.2455	0.7896	1.9638	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	27413	32306	10606	16221	20692	28634	22173	24328	15391	19096	24816	31252	20154	6500	15290	17186	22038	18599	21185	24647	17411	17212	16214	30039	19110	12064	11054	27298	16373	21176	16986	22751	12420	15153	16773	15868	11055	9783	12157	13768	14193	5090	28860	12585	13924	22780	14577	21167	13920	17357	8795	6625	13501	15421	16368	17195	4963	6632	6696	6450	22693	6160	12040	7317
GCF_018687715.1	NC_056759	NC_056759.1	Carya illinoinensis cultivar Pawnee chromosome 8; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	12271345	12286123	6986724	6946093	10000	38500285	0.32	0.32	0.18	0.18	0.36	0.9465	0.0035	0.9965	1.9442	1020	1100	2120	2816296	3184202	1766648	1914941	0	9682087	0.28	0.32	0.19	0.21	0.4	0.9132	0.165	0.8539	1.955	11189	846	938	1784	701993	660246	498978	595747	2456964	0.29	0.27	0.2	0.24	0.44	0.8738	0.2995	0.7583	1.9543	4	1433289	1723594	838637	882070	0	4877590	0.28	0.39	0.16	0.17	0.33	0.8653	0.3163	0.7445	1.8803	0	161	141	302	58910	65512	40120	40556	205098	0.28	0.31	0.21	0.2	0	0.41	0.8773	0.3017	0.7555	1.939	0	87852	106253	50424	54750	299279	0.28	0.39	0.16	0.17	0	0.33	0.8646	0.3399	0.7308	1.8682	8	12	20	273	340	387	463	1463	0.19	0.23	0.27	0.32	0.58	0.8779	0.2356	0.7997	1.9601	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20885	25225	8248	12489	15924	22296	16531	18643	11201	14513	19732	25185	15798	4933	11939	13363	16487	14208	15793	19052	13064	13053	12185	23722	14164	9143	8833	21159	12202	15991	12452	17483	8968	11859	13154	12089	8073	7403	8902	10099	10925	3539	23267	9437	10350	17054	11320	16349	10646	13171	6267	4642	10775	11734	12581	13127	3810	4692	4883	4939	17941	4436	8606	5680
GCF_018687715.1	NC_056760	NC_056760.1	Carya illinoinensis cultivar Pawnee chromosome 9; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	14308209	14297977	8012278	8089866	0	44708330	0.32	0.32	0.18	0.18	0.36	0.947	0.0052	0.9948	1.9428	1256	1343	2599	3507151	3968811	2223882	2392226	0	12092070	0.28	0.32	0.19	0.2	0.4	0.9138	0.1544	0.8623	1.9557	21747	1058	1156	2214	847595	812468	619503	724155	3003721	0.28	0.27	0.2	0.24	0.44	0.8757	0.292	0.7635	1.9555	0	1853632	2217075	1086020	1140939	0	6297666	0.28	0.39	0.16	0.17	0.33	0.8656	0.3097	0.7492	1.8818	0	174	158	332	80685	93104	56022	56666	286477	0.28	0.31	0.2	0.2	0	0.41	0.88	0.2947	0.7607	1.9372	126	97379	118152	54121	57565	327217	0.27	0.4	0.17	0.17	0	0.33	0.8611	0.3651	0.7136	1.8684	14	15	29	441	503	545	688	2177	0.2	0.23	0.25	0.32	0.57	0.884	0.2151	0.8131	1.9721	0	1	1	44	42	33	37	156	0.28	0.27	0.21	0.24	0	0.45	0.8617	0.0804	0.9232	1.9911	25499	30407	9953	15168	19254	26582	20256	23289	14455	17859	24384	29426	18947	6180	14334	16556	20290	17231	19794	23651	15825	15801	15514	27740	17077	11676	10683	25956	15521	19945	16153	22052	11283	14384	15296	14934	9964	8942	11463	12488	13199	4761	27037	11594	12543	21007	13826	19738	12405	16329	8139	5929	12818	14826	15189	16566	4433	6032	6224	5999	21628	5221	9910	6771
GCF_018687715.1	NC_056761	NC_056761.1	Carya illinoinensis cultivar Pawnee chromosome 10; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	12622879	12688139	7261215	7248009	10000	39830242	0.32	0.32	0.18	0.18	0.36	0.9463	0.0035	0.9965	1.9461	1013	978	1991	2357308	2670193	1495490	1619451	0	8142442	0.28	0.32	0.19	0.21	0.4	0.9126	0.1665	0.853	1.9548	2532	834	815	1649	608816	577102	440496	519908	2146322	0.29	0.27	0.2	0.24	0.44	0.8758	0.2951	0.7611	1.9552	4	1182175	1425094	694277	728977	0	4030523	0.28	0.39	0.16	0.17	0.33	0.8655	0.3147	0.7456	1.882	0	160	139	299	68152	75790	45831	46826	236599	0.29	0.31	0.21	0.2	0	0.4	0.8803	0.2923	0.7611	1.9381	0	74657	88663	41736	44142	249198	0.27	0.4	0.16	0.17	0	0.33	0.8628	0.3634	0.7156	1.8625	11	14	25	369	428	478	596	1871	0.2	0.23	0.26	0.32	0.57	0.8816	0.2124	0.815	1.9697	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18633	21734	7170	10700	13660	19314	14848	16421	10010	12763	17163	21388	13726	4405	10338	12168	14635	12559	14072	16498	11117	11550	10665	19936	12346	8222	7648	18479	10947	14158	11308	15166	8132	10277	11249	10774	7168	6434	7995	8850	9406	3253	19634	8539	8674	14756	9849	13877	8948	11833	5587	4288	9245	10514	11193	11933	3189	4154	4360	4359	15498	3863	7115	4718
GCF_018687715.1	NC_056762	NC_056762.1	Carya illinoinensis cultivar Pawnee chromosome 11; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	14409981	14415302	8293818	8399051	20000	45538152	0.32	0.32	0.18	0.18	0.37	0.9458	0.0065	0.9936	1.9479	6497	1277	7774	3541504	3990537	2308360	2513757	0	12354158	0.24	0.25	0.25	0.27	0.51	0.9068	0.0855	0.9214	1.9751	23326	1007	1080	2087	795136	756793	576062	684210	2812201	0.28	0.27	0.2	0.24	0.44	0.8742	0.2977	0.7591	1.955	8	1888542	2250341	1103648	1179934	0	6422465	0.28	0.39	0.16	0.17	0.33	0.866	0.3106	0.7488	1.8821	0	161	169	330	79249	91999	52935	56339	280522	0.28	0.32	0.2	0.2	0	0.4	0.8736	0.3171	0.7454	1.9316	0	92321	107998	49485	54722	304526	0.27	0.4	0.16	0.17	0	0.32	0.8593	0.3663	0.7141	1.8563	14	20	34	495	563	632	809	2499	0.2	0.23	0.25	0.32	0.58	0.8837	0.2642	0.7737	1.9623	5307	0	5307	138075	133152	174846	185463	631536	0.22	0.21	0.28	0.29	0	0.57	0.904	0.0498	0.9517	1.9849	24430	28829	9564	14225	18498	25405	19567	21078	12919	16426	22392	27685	17962	5504	13519	15277	19215	16903	18185	22125	15030	15407	14084	26982	16297	10435	10116	23701	14645	18676	14542	20030	10468	13224	14914	14036	9448	8299	10486	11786	12398	4160	25403	11128	11468	19830	13034	18231	11438	15006	7174	5565	11766	14051	14726	15498	3876	5388	5747	5663	20211	4934	9424	6222
GCF_018687715.1	NC_056763	NC_056763.1	Carya illinoinensis cultivar Pawnee chromosome 12; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	9806125	9852463	5694736	5630843	10000	30994167	0.32	0.32	0.18	0.18	0.37	0.9321	0.008	0.992	1.947	823	819	1642	1998956	2288832	1266524	1373230	10000	6937542	0.28	0.32	0.19	0.2	0.4	0.9129	0.1621	0.856	1.9547	25602	680	664	1344	506520	479628	369626	435852	1791626	0.29	0.27	0.2	0.24	0.44	0.8743	0.2996	0.758	1.9535	4	994261	1215784	576443	611895	10000	3408383	0.27	0.39	0.16	0.17	0.33	0.8653	0.3149	0.7454	1.8814	0	126	134	260	47109	55190	32331	33242	167872	0.28	0.32	0.2	0.2	0	0.4	0.8789	0.293	0.7629	1.9343	163	64990	78908	38443	39107	221448	0.28	0.39	0.16	0.17	0	0.33	0.8694	0.3167	0.7484	1.8732	11	13	24	365	401	453	570	1789	0.2	0.22	0.25	0.32	0.57	0.8855	0.2207	0.8066	1.9693	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15630	18167	6043	9237	11899	15914	12302	13573	8669	10324	14192	17521	11547	3439	8925	9819	12260	10447	11515	13771	9363	9694	8926	16672	10932	6794	6372	14940	8789	11632	9228	12623	6652	8253	9322	8571	6067	5427	6431	7587	8227	2755	16362	7193	7538	12566	8364	11923	7457	9633	4904	3723	7425	8798	9402	9891	2624	3616	3716	3565	12854	3208	6323	3954
GCF_018687715.1	NC_056764	NC_056764.1	Carya illinoinensis cultivar Pawnee chromosome 13; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	11157551	11151780	6268276	6323863	71	34901541	0.32	0.32	0.18	0.18	0.36	0.947	0.0047	0.9953	1.9433	1027	1029	2056	2898716	3303098	1841268	1990977	0	10034059	0.28	0.32	0.19	0.21	0.4	0.9139	0.16	0.8582	1.9551	2120	852	885	1737	678637	650200	501059	581384	2411280	0.28	0.27	0.2	0.24	0.44	0.875	0.2942	0.7615	1.955	0	1571481	1885721	922256	982674	0	5362132	0.28	0.39	0.16	0.17	0.33	0.8658	0.3124	0.7477	1.8815	0	150	122	272	78654	90251	52683	54557	276145	0.28	0.31	0.2	0.2	0	0.4	0.8752	0.3151	0.7486	1.93	0	112374	133536	65616	67222	378748	0.27	0.41	0.16	0.17	0	0.32	0.8589	0.3595	0.7172	1.8565	15	16	31	465	531	596	717	2309	0.2	0.23	0.26	0.31	0.57	0.8889	0.1973	0.8253	1.9754	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20708	24337	7770	12131	15405	21680	16400	18209	11912	13933	18918	23530	15551	4883	11555	13055	17144	14000	15864	18662	12468	12877	12425	22894	13846	9167	8685	20421	12354	15645	12528	17379	8948	11094	12350	11885	8299	7337	8884	10184	10367	3823	21749	9461	9913	16648	10783	15852	10161	12983	6493	4803	10378	12341	12602	14246	3421	4739	4991	4968	17165	4264	8232	5637
GCF_018687715.1	NC_056765	NC_056765.1	Carya illinoinensis cultivar Pawnee chromosome 14; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	10829739	10818384	6086871	6091539	30000	33856533	0.32	0.32	0.18	0.18	0.36	0.9435	0.0009	0.9991	1.9423	837	854	1691	2308327	2598505	1416712	1534884	10000	7868428	0.29	0.32	0.19	0.2	0.39	0.9114	0.1668	0.853	1.9507	7121	691	708	1399	548530	520737	384329	457033	1910629	0.29	0.27	0.2	0.24	0.44	0.8744	0.2998	0.758	1.9527	1	1132420	1350140	653210	688880	10000	3834650	0.28	0.39	0.16	0.17	0.33	0.8648	0.3176	0.7441	1.877	9636	127	128	255	65445	76485	43206	46355	231491	0.29	0.31	0.2	0.2	0	0.4	0.8744	0.3162	0.7466	1.9295	4	82978	99389	45205	48680	276252	0.27	0.41	0.16	0.16	0	0.32	0.8551	0.368	0.7129	1.8526	9	11	20	298	338	385	468	1489	0.2	0.23	0.26	0.31	0.57	0.8875	0.2274	0.8017	1.9705	0	1	1	29	29	29	32	119	0.24	0.24	0.24	0.27	0	0.51	0.9308	0.0492	0.9531	1.9986	16801	19413	6438	9599	12203	16906	12599	15131	8776	11559	16421	19136	12272	3640	9383	10109	12853	10961	12061	15565	9438	10014	9219	18747	10554	6859	7078	16617	10098	12805	10180	13863	6781	9313	9882	9103	6129	5468	6855	7400	8062	2654	18930	7220	7702	13151	8411	12674	8402	10480	4964	3431	8930	9666	9518	10921	2683	3744	3752	3985	13877	3191	6183	4426
GCF_018687715.1	NC_056766	NC_056766.1	Carya illinoinensis cultivar Pawnee chromosome 15; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	14906140	14849881	8688979	8631426	10097	47086523	0.32	0.32	0.18	0.18	0.37	0.9426	0.0052	0.9948	1.9489	1093	1429	2522	3436736	3768273	2174663	2357069	0	11736741	0.28	0.31	0.2	0.22	0.41	0.9122	0.1524	0.8641	1.9573	73055	879	849	1728	725550	694045	498351	588505	2506451	0.29	0.27	0.2	0.24	0.44	0.8761	0.283	0.7695	1.9547	0	1420642	1669179	814793	862736	0	4767350	0.28	0.39	0.16	0.17	0.33	0.8633	0.3086	0.7502	1.8751	0	199	190	389	137883	161882	94821	97805	492391	0.28	0.31	0.2	0.2	0	0.41	0.8773	0.3053	0.7531	1.9334	0	229621	252671	140068	135042	757402	0.27	0.4	0.16	0.17	0	0.33	0.8638	0.3512	0.7229	1.8634	5	4	9	126	173	154	209	662	0.19	0.26	0.23	0.32	0.55	0.8865	0.3335	0.7299	1.9613	3	380	383	158904	146053	159011	202061	666029	0.24	0.22	0.24	0.29	0	0.54	0.9096	0.1304	0.8806	1.9886	21047	24491	8834	12880	15130	20880	15772	20378	11228	15310	22403	25642	16563	4836	12473	13793	17252	13305	16160	21184	11577	13068	11987	24557	12922	8729	9550	21759	13960	16861	13054	18690	8512	12972	13872	11553	7806	6670	9251	9511	10639	3582	23782	8982	10911	16859	10641	17106	11436	14437	6503	4171	12448	11867	12161	14142	4029	4563	4743	5251	18410	5317	9364	5656
GCF_018687715.1	NC_056767	NC_056767.1	Carya illinoinensis cultivar Pawnee chromosome 16; C.illinoinensisPawnee_v1; whole genome shotgun sequence.	9776203	9735516	5537296	5577313	0	30626328	0.32	0.32	0.18	0.18	0.36	0.9409	0.0057	0.9943	1.9451	725	708	1433	2119637	2365361	1303077	1410196	0	7198271	0.29	0.32	0.19	0.2	0.39	0.9126	0.1626	0.8563	1.9534	66151	603	570	1173	488063	467329	339926	407644	1702962	0.29	0.27	0.2	0.24	0.44	0.8762	0.2952	0.7611	1.954	0	983981	1169791	573081	604694	0	3331547	0.28	0.39	0.16	0.17	0.33	0.8641	0.3172	0.7446	1.8779	0	117	129	246	59720	67428	38339	41222	206709	0.29	0.31	0.2	0.2	0	0.4	0.8785	0.2977	0.7592	1.9342	0	90941	106479	55735	53547	306702	0.28	0.4	0.16	0.17	0	0.32	0.8629	0.3395	0.7308	1.8611	3	3	6	79	117	107	138	441	0.18	0.27	0.24	0.31	0.56	0.8877	0.3214	0.7347	1.9651	0	1	1	26	32	29	32	119	0.22	0.27	0.24	0.27	0	0.51	0.9099	0.1526	0.8594	1.9949	14711	17320	5817	8639	10642	15188	11322	13592	7636	10103	14623	17534	11039	3348	8609	9272	11690	9714	10671	13941	8529	9191	8140	16809	9350	5836	6475	15409	9079	11129	8565	12629	5947	8219	8834	8056	5234	4785	6363	6456	7112	2466	16384	6434	6840	11786	7547	11320	7710	9179	4449	3053	8213	8491	8483	9456	2464	3144	3359	3391	12473	2927	5336	3802
NA	NC_041449	NC_041449.1	Carya illinoinensis chloroplast; complete genome.	50844	51839	29559	28577	0	160819	0.32	0.32	0.18	0.18	0.36	0.9332	0.0266	0.9738	1.9438	49	74	123	30008	29664	17596	20643	0	97911	0.28	0.3	0.19	0.23	0.42	0.8929	0.23	0.8028	1.9425	95	29	49	78	23415	23876	13169	15092	75552	0.3	0.32	0.17	0.2	0.38	0.8932	0.2356	0.797	1.9368	95	2976	2623	1265	1521	0	8385	0.35	0.31	0.15	0.18	0.34	0.8937	0.1618	0.8547	1.9117	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14	18	32	533	637	534	674	2378	0.22	0.27	0.22	0.28	0.5	0.8868	0.2168	0.8172	1.9594	4	4	8	2446	1788	2242	2936	9412	0.27	0.21	0.24	0.29	0	0.52	0.9148	0.2381	0.79	1.9832	571	349	519	507	377	338	618	1098	307	452	965	995	396	133	394	292	535	171	496	920	168	567	182	834	199	219	362	552	752	671	422	570	158	718	375	204	127	196	196	190	124	97	1010	168	74	478	259	456	216	479	180	148	839	402	161	287	22	113	145	324	707	40	16	344