GCF_003713225.1 | NC_039898 | NC_039898.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 1c; Cara_1.0; whole genome shotgun sequence. | 15903822 | 15922493 | 9266077 | 9298527 | 245669 | 50636588 | 0.31 | 0.31 | 0.18 | 0.18 | 0 | 0.37 | 0.9381 | 0.0023 | 0.9977 | 1.947 | 1062 | 1084 | 2146 | 2242543 | 2597228 | 1425775 | 1585076 | 26334 | 7876956 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9117 | 0.173 | 0.8468 | 1.9554 | 17106 | 815 | 842 | 1657 | 607885 | 581929 | 429870 | 511482 | 0 | 2131166 | 0.29 | 0.27 | 0.2 | 0.24 | 0 | 0.44 | 0.875 | 0.2947 | 0.7614 | 1.9529 | 5 | 835087 | 1065069 | 492567 | 530627 | 17391 | 2940741 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.35 | 0.8673 | 0.3243 | 0.7383 | 1.8903 | 0 | 163 | 126 | 289 | 58503 | 69292 | 39254 | 45389 | 0 | 212438 | 0.28 | 0.31 | 0.19 | 0.22 | 0 | 0.41 | 0.8695 | 0.3369 | 0.7302 | 1.9352 | 0 | 73155 | 93946 | 41656 | 46293 | 0 | 255050 | 0.27 | 0.4 | 0.16 | 0.17 | 0 | 0.33 | 0.867 | 0.3314 | 0.7347 | 1.8774 | 0 | 20 | 26 | 46 | 665 | 797 | 864 | 1053 | 0 | 3379 | 0.2 | 0.24 | 0.26 | 0.31 | 0 | 0.57 | 0.8903 | 0.2301 | 0.8008 | 1.9709 | 0 | 0 | 2 | 2 | 71 | 65 | 83 | 92 | 0 | 311 | 0.23 | 0.21 | 0.27 | 0.3 | 0 | 0.56 | 0.8747 | 0.0955 | 0.9092 | 1.9867 | 0 | 17855 | 21306 | 7312 | 11299 | 13975 | 18228 | 15392 | 17420 | 9561 | 12568 | 17669 | 21835 | 13760 | 3694 | 10374 | 11033 | 14036 | 12067 | 13590 | 16925 | 12626 | 10636 | 10114 | 20832 | 12510 | 7306 | 7731 | 19240 | 11046 | 14498 | 10997 | 15794 | 7903 | 9797 | 10599 | 9964 | 7028 | 5773 | 7498 | 8486 | 9455 | 3289 | 20421 | 8176 | 9125 | 14813 | 8852 | 14199 | 9114 | 11557 | 4702 | 3907 | 9785 | 10814 | 11180 | 11458 | 3210 | 3973 | 4020 | 4175 | 16026 | 3860 | 7418 | 4626 |
GCF_003713225.1 | NC_039899 | NC_039899.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 1e; Cara_1.0; whole genome shotgun sequence. | 15340419 | 15343133 | 8951501 | 8974739 | 147178 | 48756970 | 0.31 | 0.31 | 0.18 | 0.18 | 0 | 0.37 | 0.9378 | 0.0014 | 0.9986 | 1.9482 | 1272 | 1356 | 2628 | 3025004 | 3542150 | 1922062 | 2145564 | 7774 | 10642554 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9131 | 0.1716 | 0.8476 | 1.9564 | 12159 | 1088 | 1182 | 2270 | 899351 | 861635 | 632493 | 757652 | 0 | 3151131 | 0.29 | 0.27 | 0.2 | 0.24 | 0 | 0.44 | 0.8742 | 0.2968 | 0.7603 | 1.9535 | 4 | 1412501 | 1812819 | 827970 | 904139 | 7774 | 4965203 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.8674 | 0.3243 | 0.7382 | 1.8899 | 0 | 133 | 118 | 251 | 61864 | 75844 | 41623 | 46101 | 0 | 225432 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.8715 | 0.3364 | 0.7341 | 1.9272 | 0 | 76531 | 95530 | 41185 | 47942 | 0 | 261188 | 0.27 | 0.4 | 0.16 | 0.17 | 0 | 0.33 | 0.8644 | 0.3451 | 0.7236 | 1.8724 | 0 | 26 | 33 | 59 | 817 | 1055 | 1105 | 1372 | 0 | 4349 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8878 | 0.265 | 0.7725 | 1.9676 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 26137 | 31481 | 10631 | 16966 | 20745 | 27074 | 23662 | 25456 | 14089 | 18219 | 26601 | 32625 | 21024 | 5566 | 15716 | 16128 | 21456 | 17540 | 19778 | 25534 | 18160 | 16366 | 14298 | 31458 | 18738 | 10655 | 11298 | 27787 | 16438 | 21805 | 16021 | 22831 | 11336 | 14289 | 15907 | 14310 | 9869 | 8419 | 11056 | 12298 | 13970 | 4704 | 29959 | 12115 | 13434 | 22546 | 13015 | 21174 | 13623 | 17143 | 7099 | 5753 | 14095 | 16225 | 16484 | 16972 | 4652 | 5643 | 6018 | 6133 | 23498 | 5451 | 11054 | 6812 |
GCF_003713225.1 | NC_039900 | NC_039900.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 2c; Cara_1.0; whole genome shotgun sequence. | 21006097 | 21033636 | 12041722 | 12019237 | 54658 | 66155350 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.36 | 0.949 | 0.0016 | 0.9984 | 1.9455 | 2111 | 2054 | 4165 | 4965198 | 5852116 | 3141897 | 3492780 | 8614 | 17460605 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9138 | 0.1652 | 0.8528 | 1.9552 | 16494 | 1873 | 1817 | 3690 | 1410686 | 1353695 | 1007670 | 1194059 | 0 | 4966110 | 0.29 | 0.28 | 0.2 | 0.24 | 0 | 0.44 | 0.874 | 0.2948 | 0.7613 | 1.9547 | 0 | 2403442 | 3100983 | 1390997 | 1522906 | 8614 | 8426942 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.8694 | 0.3136 | 0.7456 | 1.8913 | 0 | 167 | 159 | 326 | 82153 | 96602 | 54125 | 59554 | 0 | 292434 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8688 | 0.3245 | 0.7409 | 1.9305 | 37 | 107714 | 137580 | 62185 | 66554 | 0 | 374033 | 0.27 | 0.4 | 0.16 | 0.17 | 0 | 0.33 | 0.8654 | 0.3523 | 0.7211 | 1.8663 | 0 | 30 | 31 | 61 | 871 | 1072 | 1136 | 1420 | 0 | 4499 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8896 | 0.2358 | 0.7976 | 1.9669 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 41914 | 48801 | 16943 | 26705 | 33889 | 42062 | 38658 | 39702 | 22938 | 28651 | 41552 | 50195 | 33131 | 8810 | 23818 | 25284 | 33554 | 27873 | 31000 | 39748 | 29069 | 25953 | 22631 | 47814 | 30074 | 17561 | 17534 | 42928 | 25468 | 34281 | 24988 | 35926 | 18360 | 22733 | 25580 | 23224 | 15829 | 13526 | 18171 | 20017 | 21937 | 7509 | 46794 | 19180 | 20902 | 35822 | 20692 | 32828 | 21068 | 26770 | 11249 | 9076 | 21637 | 26371 | 25773 | 26793 | 7507 | 8852 | 9551 | 9446 | 36423 | 8936 | 18045 | 10252 |
GCF_003713225.1 | NC_039901 | NC_039901.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 2e; Cara_1.0; whole genome shotgun sequence. | 22642846 | 22650059 | 13151675 | 13109776 | 78956 | 71633312 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.37 | 0.943 | 0.0018 | 0.9982 | 1.9478 | 2269 | 2200 | 4469 | 5487625 | 6433694 | 3472189 | 3870726 | 0 | 19264234 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9141 | 0.1679 | 0.8509 | 1.9554 | 27859 | 2012 | 1975 | 3987 | 1563463 | 1497818 | 1112623 | 1323950 | 0 | 5497854 | 0.29 | 0.28 | 0.2 | 0.24 | 0 | 0.44 | 0.8742 | 0.2943 | 0.7615 | 1.9547 | 0 | 2724457 | 3491852 | 1579606 | 1734047 | 0 | 9529962 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.8693 | 0.3135 | 0.7456 | 1.8908 | 0 | 189 | 150 | 339 | 70040 | 82987 | 48603 | 51794 | 0 | 253424 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.8705 | 0.3336 | 0.7334 | 1.9317 | 21 | 109717 | 140714 | 63628 | 71255 | 0 | 385314 | 0.27 | 0.4 | 0.16 | 0.17 | 0 | 0.33 | 0.8677 | 0.3386 | 0.7296 | 1.8754 | 0 | 33 | 39 | 72 | 986 | 1296 | 1335 | 1709 | 0 | 5326 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8908 | 0.2805 | 0.7645 | 1.9624 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 45980 | 53992 | 18784 | 29322 | 37454 | 47024 | 42441 | 44014 | 25287 | 31941 | 45640 | 55655 | 36460 | 9743 | 26543 | 27780 | 37066 | 30817 | 33838 | 44277 | 31971 | 28922 | 24977 | 52790 | 33340 | 19164 | 19387 | 47717 | 28463 | 38232 | 27442 | 39435 | 20044 | 25244 | 28364 | 25700 | 17803 | 14701 | 20008 | 21939 | 24331 | 8310 | 51929 | 21191 | 23426 | 40050 | 23086 | 36178 | 23161 | 29740 | 12242 | 9965 | 24167 | 29245 | 28765 | 29954 | 8260 | 9760 | 10446 | 10579 | 41082 | 9935 | 20090 | 11473 |
GCF_003713225.1 | NC_039902 | NC_039902.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 3c; Cara_1.0; whole genome shotgun sequence. | 13199497 | 13245925 | 7556336 | 7532846 | 32149 | 41566753 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.36 | 0.9427 | 0.0033 | 0.9967 | 1.945 | 1068 | 1037 | 2105 | 2489615 | 2852336 | 1521539 | 1703711 | 1000 | 8568201 | 0.29 | 0.32 | 0.18 | 0.21 | 0 | 0.39 | 0.9119 | 0.1696 | 0.8498 | 1.9536 | 3982 | 941 | 912 | 1853 | 743552 | 708947 | 504052 | 606440 | 0 | 2562991 | 0.29 | 0.27 | 0.19 | 0.24 | 0 | 0.44 | 0.8748 | 0.2921 | 0.7646 | 1.9525 | 4 | 1110718 | 1398106 | 637273 | 695256 | 1000 | 3842353 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.8689 | 0.3122 | 0.7464 | 1.891 | 0 | 109 | 110 | 219 | 38890 | 44642 | 26027 | 27972 | 0 | 137531 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.4 | 0.871 | 0.3419 | 0.7306 | 1.9287 | 0 | 120421 | 137445 | 64756 | 71390 | 0 | 394012 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8711 | 0.3215 | 0.7414 | 1.8852 | 0 | 8 | 4 | 12 | 163 | 216 | 223 | 280 | 0 | 882 | 0.18 | 0.25 | 0.25 | 0.32 | 0 | 0.57 | 0.8873 | 0.2555 | 0.7809 | 1.9676 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 21572 | 25457 | 9204 | 13589 | 17619 | 21961 | 19000 | 22293 | 10664 | 14487 | 22487 | 28179 | 17225 | 4174 | 12504 | 13321 | 17148 | 14139 | 15729 | 21520 | 14586 | 13619 | 11507 | 26056 | 14682 | 8489 | 9453 | 23377 | 13971 | 17948 | 13791 | 19417 | 8971 | 12247 | 13552 | 11328 | 7564 | 6358 | 8884 | 9582 | 10885 | 3249 | 25941 | 9631 | 10496 | 18858 | 9950 | 16614 | 10685 | 14064 | 4973 | 4144 | 12011 | 13081 | 13093 | 14574 | 3411 | 3958 | 4055 | 4488 | 18910 | 4150 | 8165 | 5203 |
GCF_003713225.1 | NC_039903 | NC_039903.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 3e; Cara_1.0; whole genome shotgun sequence. | 11853848 | 11834422 | 6781501 | 6778480 | 23213 | 37271464 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.36 | 0.9431 | 0.001 | 0.999 | 1.9457 | 916 | 891 | 1807 | 2047524 | 2351288 | 1256217 | 1419246 | 0 | 7074275 | 0.29 | 0.32 | 0.18 | 0.21 | 0 | 0.39 | 0.9116 | 0.1727 | 0.8472 | 1.9531 | 2916 | 781 | 772 | 1553 | 641086 | 610172 | 431372 | 525664 | 0 | 2208294 | 0.29 | 0.27 | 0.19 | 0.24 | 0 | 0.44 | 0.8745 | 0.2968 | 0.7611 | 1.9513 | 1 | 889280 | 1128986 | 512295 | 561089 | 0 | 3091650 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8688 | 0.316 | 0.7436 | 1.8897 | 0 | 111 | 104 | 215 | 41177 | 45658 | 26970 | 29586 | 0 | 143391 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.41 | 0.8695 | 0.3321 | 0.7351 | 1.9281 | 0 | 77687 | 95169 | 43287 | 48540 | 0 | 264683 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8709 | 0.3094 | 0.7496 | 1.8824 | 0 | 5 | 7 | 12 | 190 | 185 | 230 | 276 | 0 | 881 | 0.22 | 0.21 | 0.26 | 0.31 | 0 | 0.57 | 0.8918 | 0.2314 | 0.8002 | 1.969 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18753 | 21924 | 7834 | 11722 | 14760 | 19270 | 16213 | 18954 | 9142 | 12383 | 19579 | 24172 | 14773 | 3711 | 11130 | 11286 | 14741 | 12573 | 13427 | 18620 | 12641 | 11989 | 9809 | 22755 | 12502 | 7296 | 8105 | 20175 | 12019 | 15605 | 11523 | 16276 | 7641 | 10592 | 11420 | 9902 | 6576 | 5504 | 7578 | 8230 | 9328 | 2822 | 22487 | 8223 | 8950 | 16155 | 8650 | 14483 | 9471 | 11895 | 4280 | 3572 | 10393 | 11153 | 11437 | 12234 | 3027 | 3558 | 3508 | 4003 | 16543 | 3611 | 6942 | 4561 |
GCF_003713225.1 | NC_039904 | NC_039904.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 4c; Cara_1.0; whole genome shotgun sequence. | 13181109 | 13152229 | 7667255 | 7681229 | 104514 | 41786336 | 0.32 | 0.31 | 0.18 | 0.18 | 0 | 0.37 | 0.9451 | 0.002 | 0.998 | 1.948 | 895 | 900 | 1795 | 2003837 | 2327594 | 1242915 | 1408451 | 877 | 6983674 | 0.29 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9122 | 0.1723 | 0.8474 | 1.9545 | 3415 | 781 | 789 | 1570 | 616522 | 587651 | 425538 | 517011 | 0 | 2146722 | 0.29 | 0.27 | 0.19 | 0.24 | 0 | 0.44 | 0.8744 | 0.2981 | 0.7591 | 1.9525 | 5 | 941687 | 1206281 | 538740 | 593873 | 877 | 3281458 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8687 | 0.3167 | 0.7434 | 1.8893 | 0 | 84 | 85 | 169 | 37118 | 41293 | 25146 | 27071 | 0 | 130628 | 0.29 | 0.3 | 0.2 | 0.21 | 0 | 0.41 | 0.8754 | 0.3165 | 0.7479 | 1.9373 | 0 | 44382 | 55567 | 24976 | 27492 | 0 | 152417 | 0.27 | 0.39 | 0.16 | 0.17 | 0 | 0.34 | 0.8642 | 0.3376 | 0.7298 | 1.878 | 0 | 7 | 17 | 24 | 365 | 427 | 428 | 559 | 0 | 1779 | 0.21 | 0.24 | 0.24 | 0.31 | 0 | 0.55 | 0.8912 | 0.2624 | 0.7729 | 1.9725 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18519 | 21312 | 7401 | 11455 | 14489 | 18368 | 16589 | 17388 | 9205 | 12261 | 18522 | 22263 | 14072 | 3759 | 10704 | 10761 | 14330 | 11974 | 13038 | 17515 | 12382 | 11329 | 9327 | 21538 | 12523 | 7221 | 7721 | 18741 | 11600 | 15140 | 10858 | 15627 | 7656 | 9994 | 11144 | 9872 | 6391 | 5544 | 7474 | 8300 | 9237 | 3052 | 20978 | 8190 | 8722 | 15812 | 9041 | 14667 | 9149 | 11631 | 4595 | 3750 | 9570 | 11642 | 11635 | 11751 | 3223 | 3731 | 3656 | 3946 | 15608 | 3782 | 7514 | 4446 |
GCF_003713225.1 | NC_039905 | NC_039905.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 4e; Cara_1.0; whole genome shotgun sequence. | 13417446 | 13402277 | 7822433 | 7806341 | 58932 | 42507429 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.37 | 0.9464 | 0.0016 | 0.9984 | 1.9486 | 1132 | 1064 | 2196 | 2452011 | 2849164 | 1534904 | 1723756 | 0 | 8559835 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9128 | 0.1712 | 0.8481 | 1.9545 | 19166 | 1011 | 911 | 1922 | 756551 | 718652 | 524988 | 635407 | 0 | 2635598 | 0.29 | 0.27 | 0.2 | 0.24 | 0 | 0.44 | 0.8741 | 0.2962 | 0.76 | 1.953 | 4 | 1140021 | 1457861 | 661329 | 718867 | 0 | 3978078 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.8679 | 0.3207 | 0.7406 | 1.8891 | 0 | 96 | 111 | 207 | 37192 | 40580 | 24445 | 26246 | 0 | 128463 | 0.29 | 0.3 | 0.19 | 0.21 | 0 | 0.4 | 0.8681 | 0.3321 | 0.7367 | 1.9299 | 0 | 75141 | 96440 | 42913 | 48647 | 0 | 263141 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8721 | 0.3177 | 0.7419 | 1.8826 | 0 | 9 | 30 | 39 | 598 | 686 | 686 | 901 | 0 | 2871 | 0.21 | 0.24 | 0.24 | 0.31 | 0 | 0.55 | 0.8924 | 0.2573 | 0.7761 | 1.9724 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 22547 | 26287 | 9059 | 14128 | 17912 | 22453 | 20233 | 21284 | 11516 | 15345 | 22657 | 27635 | 17419 | 4539 | 12979 | 13232 | 17392 | 14567 | 16129 | 21618 | 14778 | 14020 | 11535 | 26136 | 15365 | 9054 | 9317 | 22522 | 14075 | 18518 | 13469 | 18954 | 9409 | 12190 | 13585 | 12252 | 7921 | 6882 | 9292 | 10334 | 11553 | 3824 | 25813 | 10244 | 10802 | 19405 | 11179 | 17785 | 11091 | 14228 | 5788 | 4685 | 11666 | 14119 | 14251 | 14375 | 3874 | 4657 | 4768 | 4953 | 19232 | 4527 | 9134 | 5621 |
GCF_003713225.1 | NC_039906 | NC_039906.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 5e; Cara_1.0; whole genome shotgun sequence. | 12444527 | 12427479 | 7277010 | 7257081 | 33518 | 39439615 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.37 | 0.9293 | 0.0021 | 0.9979 | 1.9493 | 879 | 973 | 1852 | 2001125 | 2290085 | 1249618 | 1392317 | 0 | 6933145 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9113 | 0.1723 | 0.8483 | 1.9539 | 6900 | 761 | 842 | 1603 | 644113 | 616756 | 443184 | 536092 | 0 | 2240145 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.44 | 0.8755 | 0.2903 | 0.7654 | 1.9536 | 238 | 882421 | 1103631 | 509784 | 548706 | 0 | 3044542 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.868 | 0.3113 | 0.747 | 1.8909 | 0 | 102 | 109 | 211 | 41817 | 45991 | 28136 | 29153 | 0 | 145097 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8706 | 0.3167 | 0.7457 | 1.9339 | 0 | 70806 | 88897 | 39333 | 43020 | 0 | 242056 | 0.26 | 0.4 | 0.16 | 0.17 | 0 | 0.33 | 0.866 | 0.3556 | 0.7173 | 1.8727 | 0 | 4 | 11 | 15 | 235 | 249 | 275 | 347 | 0 | 1106 | 0.21 | 0.23 | 0.25 | 0.31 | 0 | 0.56 | 0.8934 | 0.2325 | 0.798 | 1.9695 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18565 | 21982 | 7769 | 12003 | 15241 | 19366 | 16399 | 18627 | 9749 | 13300 | 19233 | 24028 | 14891 | 3772 | 11352 | 11047 | 14846 | 12759 | 14012 | 18926 | 13198 | 11953 | 9976 | 22358 | 13061 | 7467 | 8259 | 20535 | 11918 | 15749 | 11370 | 16331 | 7626 | 10442 | 11660 | 10545 | 7048 | 5607 | 7899 | 8474 | 9534 | 3027 | 21930 | 8392 | 8729 | 16116 | 9079 | 14735 | 9647 | 11978 | 4801 | 3721 | 10465 | 11453 | 11644 | 12501 | 3173 | 3800 | 3904 | 4137 | 17011 | 3824 | 7240 | 4684 |
GCF_003713225.1 | NC_039907 | NC_039907.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 5c; Cara_1.0; whole genome shotgun sequence. | 14472412 | 14519792 | 8440301 | 8436758 | 30430 | 45899693 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.37 | 0.9332 | 0.0018 | 0.9982 | 1.9487 | 1018 | 1020 | 2038 | 2183414 | 2521495 | 1359586 | 1525980 | 0 | 7590475 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9118 | 0.17 | 0.8495 | 1.9544 | 7486 | 887 | 863 | 1750 | 682341 | 658188 | 474399 | 568842 | 0 | 2383770 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.44 | 0.8746 | 0.2914 | 0.7641 | 1.9542 | 2 | 965114 | 1220587 | 551834 | 605412 | 0 | 3342947 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.8681 | 0.3117 | 0.7468 | 1.8911 | 0 | 103 | 120 | 223 | 37960 | 41879 | 23726 | 26046 | 0 | 129611 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8673 | 0.3319 | 0.7359 | 1.9291 | 0 | 59153 | 76151 | 33585 | 38076 | 0 | 206965 | 0.27 | 0.4 | 0.16 | 0.17 | 0 | 0.33 | 0.869 | 0.3342 | 0.7321 | 1.8739 | 0 | 12 | 11 | 23 | 363 | 346 | 443 | 520 | 0 | 1672 | 0.22 | 0.21 | 0.27 | 0.31 | 0 | 0.58 | 0.8901 | 0.1951 | 0.8296 | 1.9706 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 19661 | 23400 | 8036 | 12902 | 16246 | 20141 | 18130 | 19880 | 10428 | 14101 | 20496 | 25240 | 15969 | 3903 | 11793 | 11844 | 16051 | 13523 | 14956 | 20039 | 13720 | 12739 | 10554 | 23813 | 13645 | 8030 | 8523 | 21411 | 13005 | 16608 | 12016 | 17635 | 8339 | 11022 | 12388 | 10982 | 7340 | 6092 | 8557 | 9226 | 10222 | 3353 | 22851 | 9046 | 9561 | 17554 | 9685 | 15841 | 10329 | 13034 | 4952 | 3870 | 10921 | 12398 | 12238 | 13561 | 3286 | 3965 | 4035 | 4527 | 18014 | 3975 | 7901 | 5038 |
GCF_003713225.1 | NC_039908 | NC_039908.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 6c; Cara_1.0; whole genome shotgun sequence. | 17474701 | 17468578 | 10119017 | 10083674 | 35618 | 55181588 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.37 | 0.9477 | 0.0019 | 0.9981 | 1.9475 | 1311 | 1379 | 2690 | 3203167 | 3759337 | 2022452 | 2240956 | 0 | 11225912 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9133 | 0.1704 | 0.849 | 1.9545 | 10453 | 1123 | 1205 | 2328 | 876028 | 840100 | 626184 | 739930 | 0 | 3082242 | 0.29 | 0.28 | 0.2 | 0.24 | 0 | 0.44 | 0.8742 | 0.2943 | 0.7612 | 1.9536 | 9 | 1505597 | 1931114 | 875996 | 956793 | 0 | 5269500 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.8695 | 0.3144 | 0.7447 | 1.8917 | 0 | 145 | 129 | 274 | 61928 | 71036 | 41993 | 45140 | 0 | 220097 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8702 | 0.3253 | 0.7409 | 1.9304 | 0 | 109769 | 136739 | 61414 | 68799 | 0 | 376721 | 0.27 | 0.39 | 0.16 | 0.17 | 0 | 0.34 | 0.8714 | 0.3173 | 0.7429 | 1.8805 | 0 | 12 | 21 | 33 | 500 | 602 | 606 | 785 | 0 | 2493 | 0.2 | 0.24 | 0.24 | 0.31 | 0 | 0.56 | 0.8825 | 0.2407 | 0.7919 | 1.9726 | 0 | 1 | 0 | 1 | 30 | 25 | 29 | 35 | 0 | 119 | 0.25 | 0.21 | 0.24 | 0.29 | 0 | 0.54 | 0.8987 | 0.1847 | 0.831 | 1.9897 | 0 | 26534 | 30120 | 10435 | 16511 | 20516 | 26008 | 23233 | 24803 | 14194 | 18178 | 25435 | 31238 | 20499 | 5472 | 14858 | 15812 | 20815 | 17211 | 19206 | 25348 | 17598 | 16066 | 14356 | 29677 | 18278 | 11017 | 10851 | 27010 | 16136 | 21115 | 15505 | 21789 | 11389 | 14194 | 15597 | 14765 | 10119 | 8668 | 11328 | 12247 | 13560 | 4647 | 29516 | 12109 | 13105 | 21758 | 13209 | 20125 | 12841 | 16797 | 7051 | 5399 | 13451 | 16202 | 15968 | 17035 | 4552 | 5635 | 6087 | 5714 | 22805 | 5299 | 10701 | 6635 |
GCF_003713225.1 | NC_039909 | NC_039909.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 6e; Cara_1.0; whole genome shotgun sequence. | 16446321 | 16425303 | 9618492 | 9586001 | 164608 | 52240725 | 0.31 | 0.31 | 0.18 | 0.18 | 0 | 0.37 | 0.9487 | 0.0023 | 0.9977 | 1.9481 | 1316 | 1390 | 2706 | 3157597 | 3713057 | 2010103 | 2226307 | 10951 | 11118015 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9135 | 0.1689 | 0.8497 | 1.9556 | 20588 | 1148 | 1223 | 2371 | 901783 | 869191 | 646202 | 763502 | 0 | 3180678 | 0.28 | 0.28 | 0.2 | 0.24 | 0 | 0.44 | 0.8746 | 0.2939 | 0.7616 | 1.954 | 2 | 1520543 | 1950296 | 888612 | 967351 | 10951 | 5337753 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.8689 | 0.3189 | 0.7417 | 1.891 | 0 | 126 | 117 | 243 | 58826 | 66735 | 38348 | 42101 | 0 | 206010 | 0.28 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8705 | 0.3228 | 0.7398 | 1.9332 | 0 | 74762 | 97142 | 43196 | 48193 | 0 | 263293 | 0.26 | 0.4 | 0.16 | 0.18 | 0 | 0.34 | 0.8681 | 0.3531 | 0.7199 | 1.8787 | 0 | 17 | 19 | 36 | 528 | 637 | 660 | 856 | 0 | 2681 | 0.2 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8898 | 0.254 | 0.7813 | 1.969 | 0 | 0 | 1 | 1 | 31 | 25 | 31 | 32 | 0 | 119 | 0.26 | 0.21 | 0.26 | 0.27 | 0 | 0.53 | 0.9044 | 0.123 | 0.8876 | 1.9935 | 0 | 27344 | 30972 | 10801 | 17065 | 21569 | 26625 | 24423 | 25568 | 14817 | 18544 | 26756 | 32117 | 21119 | 5685 | 15555 | 16120 | 21794 | 18153 | 19710 | 25996 | 18342 | 16584 | 14457 | 30811 | 19068 | 11278 | 11258 | 27795 | 16722 | 21497 | 16003 | 22830 | 11781 | 14651 | 16435 | 15069 | 10336 | 8704 | 11540 | 12619 | 13920 | 4765 | 29854 | 12389 | 13422 | 23043 | 13602 | 20831 | 13159 | 17322 | 7241 | 5788 | 13914 | 16948 | 16539 | 17724 | 4648 | 5704 | 6069 | 5944 | 23448 | 5147 | 10472 | 6675 |
GCF_003713225.1 | NC_039910 | NC_039910.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 7c; Cara_1.0; whole genome shotgun sequence. | 12287082 | 12245248 | 7110907 | 7095507 | 115309 | 38854053 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.37 | 0.9489 | 0.0028 | 0.9972 | 1.9466 | 1158 | 1111 | 2269 | 2559976 | 2984745 | 1625621 | 1829481 | 11000 | 9010823 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9138 | 0.1674 | 0.8509 | 1.9569 | 40396 | 1004 | 955 | 1959 | 790186 | 755013 | 557359 | 670888 | 0 | 2773446 | 0.29 | 0.27 | 0.2 | 0.24 | 0 | 0.44 | 0.8746 | 0.294 | 0.7616 | 1.9554 | 1 | 1120903 | 1448957 | 651261 | 719854 | 11000 | 3951975 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.8679 | 0.3205 | 0.7404 | 1.8903 | 0 | 123 | 93 | 216 | 51919 | 56745 | 33883 | 37579 | 0 | 180126 | 0.29 | 0.3 | 0.19 | 0.22 | 0 | 0.41 | 0.8668 | 0.3143 | 0.749 | 1.9359 | 8 | 72313 | 93642 | 40563 | 46336 | 0 | 252854 | 0.26 | 0.41 | 0.16 | 0.18 | 0 | 0.33 | 0.8645 | 0.3616 | 0.7121 | 1.8717 | 0 | 16 | 34 | 50 | 715 | 884 | 926 | 1177 | 0 | 3702 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.89 | 0.2314 | 0.8009 | 1.969 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 23416 | 28024 | 9080 | 15076 | 18285 | 24008 | 21103 | 22371 | 12241 | 16104 | 22914 | 29286 | 17737 | 5061 | 13464 | 13904 | 18119 | 15621 | 17265 | 22188 | 16177 | 14398 | 12647 | 27830 | 16503 | 9668 | 9840 | 24716 | 14529 | 19197 | 14043 | 19990 | 10252 | 12605 | 13995 | 13033 | 8738 | 7457 | 10228 | 11050 | 12313 | 4287 | 26395 | 10376 | 11866 | 20045 | 11708 | 18473 | 11704 | 14962 | 6327 | 5109 | 12201 | 14398 | 14652 | 14773 | 3943 | 5068 | 5421 | 5366 | 20139 | 4578 | 9556 | 6065 |
GCF_003713225.1 | NC_039911 | NC_039911.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 7e; Cara_1.0; whole genome shotgun sequence. | 11254676 | 11210631 | 6450332 | 6422742 | 53849 | 35392230 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.36 | 0.9463 | 0.0041 | 0.9959 | 1.9454 | 970 | 1038 | 2008 | 2226020 | 2597251 | 1402107 | 1573573 | 7969 | 7806920 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9131 | 0.1692 | 0.8498 | 1.9558 | 4483 | 832 | 891 | 1723 | 710124 | 682047 | 493596 | 594210 | 0 | 2479977 | 0.29 | 0.28 | 0.2 | 0.24 | 0 | 0.44 | 0.8747 | 0.2911 | 0.7634 | 1.9553 | 4 | 1028421 | 1322252 | 596407 | 654766 | 7969 | 3609815 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8686 | 0.3186 | 0.7419 | 1.8896 | 0 | 111 | 100 | 211 | 39274 | 45563 | 25352 | 28394 | 0 | 138583 | 0.28 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8684 | 0.3241 | 0.7399 | 1.9327 | 87 | 54638 | 70126 | 31106 | 34570 | 0 | 190440 | 0.27 | 0.4 | 0.16 | 0.18 | 0 | 0.33 | 0.8681 | 0.3167 | 0.7423 | 1.8791 | 0 | 15 | 36 | 51 | 734 | 903 | 939 | 1200 | 0 | 3776 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8895 | 0.2317 | 0.7998 | 1.9697 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 21131 | 24889 | 8317 | 13473 | 16428 | 21185 | 18526 | 20579 | 10816 | 14586 | 21003 | 26121 | 16185 | 4291 | 12396 | 12324 | 16473 | 13719 | 15374 | 20152 | 14423 | 12779 | 11463 | 25002 | 14689 | 8443 | 9096 | 22709 | 13038 | 16548 | 12652 | 18197 | 8870 | 11410 | 12565 | 11319 | 7686 | 6554 | 9020 | 9307 | 11129 | 3484 | 23982 | 8935 | 10730 | 17866 | 10352 | 16554 | 10779 | 13499 | 5333 | 4363 | 11447 | 12614 | 13014 | 13203 | 3460 | 4270 | 4561 | 4706 | 18432 | 4202 | 8544 | 5195 |
GCF_003713225.1 | NC_039912 | NC_039912.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 8e; Cara_1.0; whole genome shotgun sequence. | 14268192 | 14295994 | 8266260 | 8242011 | 45100 | 45117557 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.37 | 0.9385 | 0.0024 | 0.9976 | 1.9473 | 1081 | 1103 | 2184 | 2540768 | 2921986 | 1576906 | 1757318 | 15857 | 8812835 | 0.29 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9115 | 0.1663 | 0.8526 | 1.9542 | 10141 | 929 | 964 | 1893 | 758038 | 724536 | 521986 | 626939 | 0 | 2631499 | 0.29 | 0.28 | 0.2 | 0.24 | 0 | 0.44 | 0.8751 | 0.2885 | 0.7658 | 1.9549 | 0 | 1159440 | 1461702 | 665554 | 728816 | 7970 | 4023482 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.869 | 0.3126 | 0.7464 | 1.8905 | 0 | 131 | 114 | 245 | 39410 | 45266 | 27740 | 29317 | 0 | 141733 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.871 | 0.3309 | 0.7383 | 1.9306 | 0 | 90777 | 108305 | 52245 | 56248 | 0 | 307575 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8694 | 0.3227 | 0.7405 | 1.8811 | 0 | 11 | 15 | 26 | 376 | 434 | 496 | 623 | 0 | 1929 | 0.19 | 0.22 | 0.26 | 0.32 | 0 | 0.58 | 0.8848 | 0.2319 | 0.7983 | 1.9658 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 23022 | 25628 | 9080 | 13942 | 17696 | 22305 | 19802 | 22013 | 11320 | 15383 | 22773 | 27706 | 17516 | 4452 | 13227 | 13604 | 18059 | 14530 | 16249 | 21861 | 15072 | 13918 | 11570 | 25639 | 15250 | 8902 | 9997 | 23721 | 13798 | 18660 | 13383 | 19418 | 9439 | 12418 | 13687 | 11761 | 8014 | 6910 | 9255 | 9666 | 11352 | 3539 | 25850 | 9728 | 10722 | 18908 | 10789 | 17902 | 11096 | 14461 | 5505 | 4361 | 12106 | 13547 | 13354 | 14732 | 3838 | 4444 | 4532 | 4824 | 19826 | 4442 | 8845 | 5508 |
GCF_003713225.1 | NC_039913 | NC_039913.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 8c; Cara_1.0; whole genome shotgun sequence. | 12418810 | 12363620 | 7071180 | 7054280 | 100573 | 39008463 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.36 | 0.939 | 0.0034 | 0.9966 | 1.9439 | 973 | 998 | 1971 | 2273290 | 2598734 | 1397658 | 1563149 | 1000 | 7833831 | 0.29 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9118 | 0.1665 | 0.853 | 1.9541 | 28671 | 820 | 861 | 1681 | 673048 | 638926 | 462497 | 556095 | 0 | 2330566 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.44 | 0.8755 | 0.2913 | 0.7643 | 1.9538 | 0 | 1047255 | 1308339 | 593808 | 648156 | 1000 | 3598558 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8694 | 0.3085 | 0.7492 | 1.8906 | 0 | 110 | 101 | 211 | 36085 | 40454 | 23800 | 25657 | 0 | 125996 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.8715 | 0.3104 | 0.7483 | 1.9356 | 0 | 61073 | 73484 | 35312 | 38441 | 0 | 208310 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8727 | 0.3148 | 0.7439 | 1.8873 | 0 | 15 | 10 | 25 | 365 | 420 | 470 | 594 | 0 | 1849 | 0.2 | 0.23 | 0.25 | 0.32 | 0 | 0.58 | 0.8838 | 0.2267 | 0.8021 | 1.9687 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 20416 | 22551 | 7887 | 12472 | 15606 | 19756 | 17211 | 19001 | 9933 | 13791 | 19995 | 24381 | 15302 | 3868 | 11530 | 11979 | 15833 | 12653 | 14483 | 19290 | 13412 | 12436 | 10100 | 22553 | 13998 | 7944 | 8705 | 20806 | 12293 | 16675 | 11817 | 16903 | 8203 | 10927 | 12270 | 10524 | 7157 | 6085 | 8322 | 8789 | 10280 | 3067 | 23180 | 8843 | 9563 | 16580 | 9561 | 15739 | 9950 | 12911 | 4804 | 3852 | 10690 | 12014 | 12032 | 13170 | 3541 | 3708 | 4001 | 4196 | 17781 | 4137 | 8525 | 4813 |
GCF_003713225.1 | NC_039914 | NC_039914.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 9c; Cara_1.0; whole genome shotgun sequence. | 11938623 | 11887614 | 7033684 | 7002736 | 201994 | 38064651 | 0.31 | 0.31 | 0.18 | 0.18 | 0.01 | 0.37 | 0.9409 | 0.0043 | 0.9957 | 1.9485 | 689 | 643 | 1332 | 1708196 | 1950175 | 1049300 | 1164463 | 0 | 5872134 | 0.29 | 0.32 | 0.19 | 0.21 | 0 | 0.39 | 0.9125 | 0.1687 | 0.8506 | 1.9529 | 14738 | 598 | 559 | 1157 | 455786 | 432555 | 318133 | 377703 | 0 | 1584177 | 0.29 | 0.28 | 0.2 | 0.24 | 0 | 0.44 | 0.8738 | 0.2936 | 0.7624 | 1.9536 | 0 | 856669 | 1054386 | 486634 | 526512 | 0 | 2924201 | 0.27 | 0.38 | 0.17 | 0.18 | 0 | 0.34 | 0.8698 | 0.3051 | 0.7517 | 1.8916 | 0 | 70 | 64 | 134 | 24801 | 27494 | 16041 | 17372 | 0 | 85708 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8662 | 0.34 | 0.7287 | 1.9307 | 12 | 63878 | 73212 | 34803 | 38462 | 0 | 210355 | 0.28 | 0.38 | 0.16 | 0.18 | 0 | 0.34 | 0.8743 | 0.2829 | 0.7668 | 1.8938 | 0 | 4 | 3 | 7 | 100 | 118 | 133 | 168 | 0 | 519 | 0.19 | 0.23 | 0.26 | 0.32 | 0 | 0.58 | 0.8911 | 0.2202 | 0.8094 | 1.9656 | 0 | 0 | 3 | 3 | 1272 | 1152 | 1311 | 1622 | 0 | 5357 | 0.24 | 0.22 | 0.25 | 0.29 | 0 | 0.54 | 0.9096 | 0.1391 | 0.8721 | 1.9872 | 0 | 13697 | 15425 | 5516 | 8598 | 10768 | 13040 | 11740 | 13065 | 6912 | 9406 | 13605 | 16072 | 10374 | 2589 | 7694 | 8220 | 10324 | 8733 | 9872 | 12668 | 9093 | 8347 | 6944 | 14994 | 9429 | 5657 | 5779 | 13711 | 8586 | 11148 | 8409 | 11483 | 5898 | 7585 | 8282 | 7439 | 5062 | 4255 | 6074 | 6274 | 6936 | 2231 | 15478 | 6080 | 6916 | 11033 | 6644 | 10438 | 6848 | 8596 | 3224 | 2640 | 7011 | 8289 | 8251 | 8670 | 2482 | 2685 | 2654 | 2949 | 12077 | 2896 | 5553 | 3317 |
GCF_003713225.1 | NC_039915 | NC_039915.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 9e; Cara_1.0; whole genome shotgun sequence. | 11301545 | 11220163 | 6668272 | 6607998 | 41917 | 35839895 | 0.32 | 0.31 | 0.19 | 0.18 | 0 | 0.37 | 0.9419 | 0.0082 | 0.9919 | 1.9507 | 686 | 674 | 1360 | 1635209 | 1893175 | 1013311 | 1136062 | 1000 | 5678757 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9125 | 0.1763 | 0.8444 | 1.9528 | 1740 | 566 | 589 | 1155 | 459850 | 438087 | 325364 | 384109 | 0 | 1607410 | 0.29 | 0.28 | 0.2 | 0.24 | 0 | 0.44 | 0.874 | 0.2959 | 0.7608 | 1.9529 | 0 | 784585 | 992247 | 449499 | 498827 | 1000 | 2726158 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8693 | 0.3125 | 0.7464 | 1.8898 | 0 | 96 | 64 | 160 | 30277 | 33630 | 19438 | 21860 | 0 | 105205 | 0.29 | 0.31 | 0.19 | 0.22 | 0 | 0.41 | 0.8617 | 0.3672 | 0.7134 | 1.9213 | 0 | 55193 | 71220 | 30211 | 34836 | 0 | 191460 | 0.27 | 0.4 | 0.16 | 0.17 | 0 | 0.33 | 0.8661 | 0.3493 | 0.7205 | 1.8729 | 0 | 3 | 2 | 5 | 73 | 84 | 96 | 120 | 0 | 373 | 0.2 | 0.22 | 0.26 | 0.32 | 0 | 0.58 | 0.8869 | 0.2111 | 0.814 | 1.9689 | 0 | 15 | 0 | 15 | 423 | 397 | 458 | 505 | 0 | 1783 | 0.24 | 0.22 | 0.26 | 0.28 | 0 | 0.54 | 0.9024 | 0.0907 | 0.9153 | 1.9923 | 0 | 13840 | 15553 | 5484 | 8745 | 10744 | 13458 | 11986 | 13022 | 7103 | 9390 | 13557 | 15972 | 10625 | 2801 | 7834 | 8419 | 10568 | 8977 | 9997 | 13040 | 9089 | 8410 | 7006 | 15252 | 9571 | 5869 | 5954 | 13977 | 8498 | 11009 | 8495 | 11349 | 5787 | 7534 | 8372 | 7444 | 5267 | 4542 | 6126 | 6661 | 6928 | 2286 | 15309 | 6068 | 6821 | 11211 | 6874 | 10628 | 6910 | 8548 | 3461 | 2762 | 7215 | 8681 | 8609 | 8798 | 2662 | 2966 | 2922 | 3055 | 12244 | 2978 | 5704 | 3441 |
GCF_003713225.1 | NC_039916 | NC_039916.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 10e; Cara_1.0; whole genome shotgun sequence. | 12777493 | 12794252 | 7430004 | 7394229 | 62956 | 40458934 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.37 | 0.9463 | 0.0031 | 0.9969 | 1.9475 | 962 | 1003 | 1965 | 2281357 | 2654908 | 1430374 | 1598703 | 0 | 7965342 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9128 | 0.168 | 0.8509 | 1.9549 | 1730 | 838 | 866 | 1704 | 664012 | 631133 | 470437 | 555983 | 0 | 2321565 | 0.29 | 0.27 | 0.2 | 0.24 | 0 | 0.44 | 0.8751 | 0.2925 | 0.763 | 1.955 | 0 | 1062770 | 1361259 | 607745 | 673913 | 0 | 3705687 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8686 | 0.316 | 0.7437 | 1.8888 | 0 | 79 | 94 | 173 | 37671 | 41503 | 24436 | 27266 | 0 | 130876 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8669 | 0.3305 | 0.7372 | 1.9322 | 0 | 59449 | 73886 | 32565 | 37270 | 0 | 203170 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8693 | 0.3248 | 0.7371 | 1.8816 | 0 | 11 | 16 | 27 | 380 | 474 | 502 | 640 | 0 | 1996 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8883 | 0.2691 | 0.7723 | 1.9631 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 19489 | 23436 | 7890 | 12331 | 15647 | 19739 | 17613 | 18665 | 10204 | 13342 | 19631 | 23490 | 15731 | 4094 | 11305 | 11883 | 15301 | 12855 | 14380 | 18836 | 13329 | 12129 | 10307 | 22490 | 14189 | 8145 | 8562 | 20558 | 12197 | 15994 | 11751 | 16563 | 8357 | 10688 | 12053 | 10708 | 7546 | 6261 | 8633 | 9231 | 10122 | 3357 | 22101 | 8901 | 9445 | 16469 | 9765 | 15349 | 9377 | 12487 | 5354 | 4163 | 10350 | 12760 | 12209 | 13513 | 3530 | 4234 | 4520 | 4323 | 17369 | 3975 | 7775 | 4714 |
GCF_003713225.1 | NC_039917 | NC_039917.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 10c; Cara_1.0; whole genome shotgun sequence. | 14296952 | 14308008 | 8348657 | 8332349 | 143059 | 45429025 | 0.31 | 0.31 | 0.18 | 0.18 | 0 | 0.37 | 0.9446 | 0.0014 | 0.9986 | 1.9478 | 918 | 858 | 1776 | 2082770 | 2414337 | 1292720 | 1444804 | 0 | 7234631 | 0.29 | 0.32 | 0.19 | 0.21 | 0 | 0.39 | 0.9121 | 0.1706 | 0.849 | 1.9533 | 17352 | 793 | 739 | 1532 | 595090 | 564093 | 417759 | 494306 | 0 | 2071248 | 0.29 | 0.27 | 0.2 | 0.24 | 0 | 0.44 | 0.8743 | 0.2913 | 0.7639 | 1.9544 | 4 | 961770 | 1225181 | 547958 | 606941 | 0 | 3341850 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.8686 | 0.3124 | 0.7461 | 1.8887 | 0 | 98 | 89 | 187 | 32721 | 37189 | 22265 | 23483 | 0 | 115658 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8674 | 0.3188 | 0.7468 | 1.9308 | 0 | 69646 | 86260 | 38695 | 44844 | 0 | 239445 | 0.27 | 0.4 | 0.16 | 0.18 | 0 | 0.33 | 0.8676 | 0.3317 | 0.7327 | 1.8738 | 0 | 8 | 13 | 21 | 297 | 377 | 389 | 510 | 0 | 1573 | 0.19 | 0.24 | 0.25 | 0.33 | 0 | 0.57 | 0.8879 | 0.2811 | 0.7606 | 1.9634 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17383 | 21005 | 6980 | 11023 | 13848 | 17513 | 15570 | 16708 | 9034 | 11913 | 17813 | 21316 | 13901 | 3493 | 10147 | 10876 | 13858 | 11370 | 12967 | 16894 | 11941 | 10850 | 9188 | 20315 | 12304 | 7172 | 7643 | 18290 | 10900 | 14519 | 10506 | 14917 | 7486 | 9472 | 10703 | 9385 | 6781 | 5588 | 7748 | 8150 | 9097 | 3015 | 20145 | 7994 | 8196 | 14817 | 8621 | 13622 | 8296 | 11279 | 4622 | 3594 | 9238 | 11167 | 10767 | 11757 | 3066 | 3701 | 3941 | 3804 | 15676 | 3640 | 6792 | 4204 |
GCF_003713225.1 | NC_039918 | NC_039918.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 11c; Cara_1.0; whole genome shotgun sequence. | 11479155 | 11475467 | 6597403 | 6594084 | 69382 | 36215491 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.36 | 0.9357 | 0.0004 | 0.9996 | 1.9457 | 906 | 935 | 1841 | 2163434 | 2475663 | 1342582 | 1492811 | 0 | 7474490 | 0.28 | 0.32 | 0.19 | 0.21 | 0 | 0.4 | 0.9127 | 0.1627 | 0.8552 | 1.9548 | 19444 | 781 | 807 | 1588 | 656391 | 634465 | 455186 | 541330 | 0 | 2287372 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8756 | 0.2943 | 0.7624 | 1.952 | 1 | 1024205 | 1262109 | 583681 | 632209 | 0 | 3502204 | 0.27 | 0.39 | 0.17 | 0.18 | 0 | 0.34 | 0.869 | 0.3083 | 0.7492 | 1.8908 | 0 | 97 | 92 | 189 | 40578 | 46516 | 26336 | 29267 | 0 | 142697 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.8736 | 0.3136 | 0.7476 | 1.937 | 0 | 52908 | 68266 | 29150 | 33869 | 0 | 184193 | 0.26 | 0.41 | 0.17 | 0.17 | 0 | 0.34 | 0.8652 | 0.36 | 0.7154 | 1.8726 | 0 | 13 | 11 | 24 | 355 | 408 | 445 | 574 | 0 | 1782 | 0.2 | 0.23 | 0.25 | 0.32 | 0 | 0.57 | 0.8877 | 0.2451 | 0.7871 | 1.9673 | 0 | 3 | 5 | 8 | 222 | 203 | 252 | 272 | 0 | 949 | 0.23 | 0.21 | 0.27 | 0.29 | 0 | 0.55 | 0.8987 | 0.0894 | 0.9165 | 1.9888 | 0 | 19285 | 22074 | 7821 | 12373 | 15141 | 18694 | 16870 | 19113 | 9999 | 13681 | 19680 | 23428 | 15474 | 3829 | 11481 | 11685 | 15127 | 12473 | 14710 | 19106 | 13278 | 11669 | 10420 | 22668 | 13384 | 7770 | 8707 | 20900 | 12542 | 15651 | 11915 | 17167 | 7998 | 10965 | 12062 | 10516 | 7004 | 5777 | 8402 | 8567 | 10108 | 3082 | 22028 | 8390 | 9571 | 16183 | 9306 | 15298 | 9912 | 12692 | 4854 | 3839 | 10921 | 11628 | 11712 | 12311 | 3398 | 3834 | 4006 | 4231 | 17143 | 4064 | 7875 | 4788 |
GCF_003713225.1 | NC_039919 | NC_039919.1 | Coffea arabica cultivar Caturra red isolate CCC135-36 chromosome 11e; Cara_1.0; whole genome shotgun sequence. | 13379265 | 13377786 | 7823809 | 7787056 | 97852 | 42465768 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.37 | 0.9362 | 0.0024 | 0.9976 | 1.9483 | 955 | 929 | 1884 | 2273600 | 2596968 | 1401649 | 1567992 | 0 | 7840209 | 0.29 | 0.32 | 0.19 | 0.21 | 0 | 0.39 | 0.9123 | 0.1667 | 0.8522 | 1.9535 | 24227 | 835 | 804 | 1639 | 671246 | 650065 | 464732 | 559613 | 0 | 2345656 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.44 | 0.8755 | 0.2908 | 0.764 | 1.9535 | 1 | 999707 | 1235466 | 570283 | 618914 | 0 | 3424370 | 0.27 | 0.39 | 0.16 | 0.18 | 0 | 0.34 | 0.869 | 0.3108 | 0.7478 | 1.8893 | 0 | 92 | 113 | 205 | 41110 | 43892 | 26028 | 29134 | 0 | 140164 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8673 | 0.3569 | 0.7184 | 1.9261 | 0 | 103545 | 126780 | 57571 | 63974 | 0 | 351870 | 0.27 | 0.4 | 0.16 | 0.17 | 0 | 0.34 | 0.8693 | 0.3492 | 0.7226 | 1.876 | 0 | 11 | 8 | 19 | 276 | 322 | 365 | 457 | 0 | 1420 | 0.19 | 0.23 | 0.26 | 0.32 | 0 | 0.58 | 0.8905 | 0.2406 | 0.7903 | 1.9658 | 0 | 3 | 0 | 3 | 83 | 79 | 102 | 93 | 0 | 357 | 0.23 | 0.22 | 0.29 | 0.26 | 0 | 0.55 | 0.9206 | 0.0945 | 0.912 | 1.9896 | 0 | 19686 | 22869 | 8480 | 12520 | 15766 | 19711 | 17040 | 19733 | 10287 | 14127 | 20131 | 24196 | 15500 | 3976 | 11552 | 11850 | 15154 | 13498 | 15097 | 19502 | 13712 | 11996 | 10629 | 23262 | 13751 | 7815 | 8916 | 21810 | 12752 | 16196 | 12336 | 17396 | 8407 | 11604 | 12109 | 10728 | 7168 | 6061 | 8589 | 8733 | 10105 | 3229 | 22279 | 8554 | 9621 | 16607 | 9706 | 15506 | 10225 | 12834 | 5087 | 3919 | 11241 | 11926 | 12241 | 12399 | 3451 | 4137 | 4067 | 4364 | 17381 | 3932 | 7537 | 5017 |
NA | NC_008535 | NC_008535.1 | Coffea arabica chloroplast; complete genome. | 47997 | 49102 | 29582 | 28507 | 0 | 155188 | 0.31 | 0.32 | 0.19 | 0.18 | 0 | 0.37 | 0.8511 | 0.0299 | 0.9706 | 1.9538 | 54 | 84 | 138 | 31246 | 30806 | 18579 | 21817 | 0 | 102448 | 0.27 | 0.29 | 0.2 | 0.24 | 0 | 0.44 | 0.8924 | 0.2322 | 0.8015 | 1.9488 | 73 | 29 | 54 | 83 | 23783 | 24241 | 13674 | 15638 | 0 | 77336 | 0.3 | 0.31 | 0.17 | 0.21 | 0 | 0.38 | 0.8889 | 0.2638 | 0.783 | 1.9274 | 73 | 2599 | 2369 | 1156 | 1445 | 0 | 7569 | 0.34 | 0.31 | 0.16 | 0.19 | 0 | 0.35 | 0.8972 | 0.1557 | 0.7687 | 1.9229 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 21 | 24 | 45 | 615 | 692 | 666 | 830 | 0 | 2803 | 0.22 | 0.24 | 0.24 | 0.3 | 0 | 0.54 | 0.8809 | 0.2348 | 0.8035 | 1.9672 | 0 | 4 | 4 | 8 | 2354 | 1692 | 2146 | 2858 | 0 | 9050 | 0.26 | 0.2 | 0.23 | 0.31 | 0 | 0.54 | 0.9104 | 0.2802 | 0.7574 | 1.9789 | 0 | 591 | 361 | 529 | 493 | 372 | 328 | 619 | 1103 | 315 | 459 | 989 | 1016 | 397 | 139 | 396 | 280 | 583 | 175 | 514 | 949 | 178 | 548 | 182 | 857 | 219 | 266 | 385 | 565 | 759 | 693 | 404 | 587 | 163 | 686 | 404 | 191 | 154 | 212 | 187 | 228 | 122 | 109 | 1039 | 194 | 81 | 511 | 327 | 468 | 216 | 448 | 196 | 136 | 801 | 401 | 158 | 305 | 22 | 129 | 139 | 333 | 716 | 52 | 26 | 369 |