Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_001625215.2 | NC_030381 | NC_030381.2 | Daucus carota subsp. sativus chromosome 1; DH1 v3.0; whole genome shotgun sequence. | 18322284 | 18465994 | 9743835 | 9783159 | 5000 | 56320272 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.35 | 0.9325 | 0.0059 | 0.9941 | 1.9311 | 2595 | 2603 | 5198 | 6715860 | 7548429 | 3856272 | 4326898 | 300 | 22447759 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9112 | 0.161 | 0.8567 | 1.946 | 40883 | 2306 | 2286 | 4592 | 1892029 | 1804494 | 1256653 | 1537341 | 0 | 6490517 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8754 | 0.2959 | 0.7604 | 1.9519 | 0 | 3048276 | 3705172 | 1584531 | 1713815 | 100 | 10051894 | 0.29 | 0.39 | 0.15 | 0.16 | 0 | 0.32 | 0.8621 | 0.2984 | 0.7577 | 1.8701 | 0 | 218 | 220 | 438 | 153084 | 170730 | 89473 | 103105 | 0 | 516392 | 0.3 | 0.31 | 0.18 | 0.21 | 0 | 0.39 | 0.8737 | 0.2977 | 0.7603 | 1.9328 | 0 | 194694 | 234946 | 98691 | 112666 | 0 | 640997 | 0.29 | 0.4 | 0.15 | 0.16 | 0 | 0.31 | 0.8605 | 0.316 | 0.7442 | 1.8593 | 0 | 39 | 50 | 89 | 1418 | 1637 | 1593 | 2017 | 0 | 6665 | 0.21 | 0.25 | 0.24 | 0.3 | 0 | 0.54 | 0.8866 | 0.2187 | 0.8112 | 1.9751 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 56173 | 64674 | 23975 | 36872 | 40895 | 53486 | 47805 | 52970 | 24804 | 35738 | 58941 | 66640 | 42595 | 11742 | 34918 | 33756 | 44812 | 36846 | 37259 | 54692 | 33724 | 35292 | 27566 | 68118 | 37494 | 20612 | 23929 | 53400 | 38567 | 43901 | 32164 | 46655 | 22049 | 33324 | 36893 | 28567 | 19761 | 15461 | 24253 | 21356 | 26355 | 8709 | 66152 | 21957 | 24345 | 50051 | 26332 | 43251 | 29690 | 34286 | 17095 | 13055 | 32499 | 33634 | 30874 | 32840 | 10031 | 10867 | 13591 | 13547 | 46374 | 12586 | 22126 | 14469 |
GCF_001625215.2 | NC_030382 | NC_030382.2 | Daucus carota subsp. sativus chromosome 2; DH1 v3.0; whole genome shotgun sequence. | 19184113 | 19251045 | 10351459 | 10380008 | 8400 | 59175025 | 0.32 | 0.33 | 0.17 | 0.18 | 0 | 0.35 | 0.9201 | 0.0031 | 0.9969 | 1.9343 | 2324 | 2430 | 4754 | 5738675 | 6433269 | 3293900 | 3692323 | 200 | 19158367 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9105 | 0.1602 | 0.8573 | 1.9469 | 36749 | 2018 | 2132 | 4150 | 1702930 | 1602969 | 1122553 | 1376454 | 0 | 5804906 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8749 | 0.2972 | 0.7595 | 1.9514 | 8 | 2593002 | 3150680 | 1362148 | 1449057 | 100 | 8554987 | 0.29 | 0.39 | 0.15 | 0.16 | 0 | 0.32 | 0.8614 | 0.3015 | 0.7554 | 1.8685 | 0 | 245 | 239 | 484 | 150748 | 170851 | 88928 | 103527 | 0 | 514054 | 0.29 | 0.31 | 0.18 | 0.21 | 0 | 0.4 | 0.8729 | 0.3164 | 0.7468 | 1.9307 | 0 | 205748 | 245597 | 104210 | 121818 | 100 | 677473 | 0.29 | 0.4 | 0.15 | 0.17 | 0 | 0.31 | 0.8617 | 0.3175 | 0.7435 | 1.86 | 0 | 33 | 44 | 77 | 1127 | 1353 | 1433 | 1795 | 0 | 5708 | 0.2 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8816 | 0.2552 | 0.7825 | 1.9662 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 50958 | 58767 | 21187 | 32324 | 36557 | 47580 | 42259 | 46994 | 21740 | 32290 | 51761 | 60094 | 37660 | 10995 | 31185 | 30292 | 38995 | 33237 | 33821 | 48770 | 30052 | 31234 | 24718 | 60107 | 33493 | 18357 | 21426 | 46914 | 34168 | 39351 | 28526 | 40137 | 20009 | 29877 | 33650 | 25725 | 18810 | 13673 | 21827 | 19234 | 23417 | 7614 | 60049 | 19615 | 22222 | 43309 | 23165 | 38678 | 27127 | 31169 | 14867 | 11686 | 28835 | 29211 | 27962 | 29412 | 9462 | 9935 | 12401 | 11765 | 42268 | 12310 | 21049 | 13203 |
GCF_001625215.2 | NC_030383 | NC_030383.2 | Daucus carota subsp. sativus chromosome 3; DH1 v3.0; whole genome shotgun sequence. | 21009951 | 20945906 | 11292967 | 11297028 | 13100 | 64558952 | 0.33 | 0.32 | 0.17 | 0.17 | 0 | 0.35 | 0.9444 | 0.0017 | 0.9983 | 1.934 | 2467 | 2439 | 4906 | 6029696 | 6727772 | 3456161 | 3866182 | 200 | 20080011 | 0.29 | 0.33 | 0.18 | 0.2 | 0 | 0.38 | 0.9108 | 0.16 | 0.8575 | 1.9461 | 29440 | 2172 | 2099 | 4271 | 1775720 | 1686662 | 1181999 | 1429066 | 0 | 6073447 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8757 | 0.2957 | 0.7607 | 1.9516 | 0 | 2666184 | 3208685 | 1389904 | 1483056 | 100 | 8747929 | 0.29 | 0.39 | 0.15 | 0.16 | 0 | 0.32 | 0.861 | 0.3063 | 0.7522 | 1.8673 | 0 | 250 | 299 | 549 | 194347 | 214949 | 112730 | 128139 | 0 | 650165 | 0.3 | 0.31 | 0.18 | 0.21 | 0 | 0.39 | 0.8741 | 0.2988 | 0.759 | 1.9317 | 0 | 244942 | 292857 | 125571 | 143729 | 100 | 807199 | 0.29 | 0.4 | 0.15 | 0.17 | 0 | 0.31 | 0.8621 | 0.3235 | 0.738 | 1.8616 | 0 | 18 | 20 | 38 | 536 | 690 | 706 | 889 | 0 | 2821 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8867 | 0.2678 | 0.7722 | 1.9667 | 0 | 1 | 0 | 1 | 37 | 32 | 43 | 44 | 0 | 156 | 0.24 | 0.21 | 0.28 | 0.28 | 0 | 0.56 | 0.8809 | 0.084 | 0.9211 | 1.9886 | 0 | 52443 | 60593 | 21641 | 34048 | 37222 | 49955 | 42958 | 49482 | 23572 | 33240 | 55162 | 62156 | 39809 | 11467 | 32814 | 32132 | 41618 | 34532 | 35653 | 50796 | 32364 | 32078 | 26962 | 62233 | 35426 | 19521 | 22675 | 51099 | 35474 | 39982 | 30492 | 43812 | 20748 | 31846 | 34959 | 27349 | 19686 | 14271 | 22621 | 19975 | 24904 | 8014 | 61559 | 20628 | 23065 | 44693 | 23844 | 39972 | 28331 | 33533 | 16096 | 12121 | 30593 | 30150 | 29095 | 30697 | 9547 | 10212 | 12703 | 12270 | 44302 | 12643 | 21617 | 13445 |
GCF_001625215.2 | NC_030384 | NC_030384.2 | Daucus carota subsp. sativus chromosome 4; DH1 v3.0; whole genome shotgun sequence. | 16562387 | 16474578 | 9059308 | 9052235 | 4400 | 51152908 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.35 | 0.9172 | 0.003 | 0.997 | 1.9376 | 2092 | 2044 | 4136 | 5020432 | 5654029 | 2901755 | 3253497 | 200 | 16829913 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9115 | 0.158 | 0.8589 | 1.9471 | 13698 | 1860 | 1811 | 3671 | 1505495 | 1420772 | 1012678 | 1229443 | 0 | 5168388 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8747 | 0.2964 | 0.7599 | 1.9523 | 0 | 2321062 | 2832413 | 1213267 | 1303660 | 100 | 7670502 | 0.29 | 0.39 | 0.15 | 0.17 | 0 | 0.32 | 0.8623 | 0.3033 | 0.754 | 1.869 | 0 | 183 | 202 | 385 | 131994 | 146610 | 75725 | 89232 | 0 | 443561 | 0.29 | 0.31 | 0.18 | 0.21 | 0 | 0.39 | 0.8758 | 0.3074 | 0.7533 | 1.9316 | 0 | 174460 | 213636 | 89866 | 104223 | 0 | 582185 | 0.29 | 0.4 | 0.15 | 0.17 | 0 | 0.31 | 0.8602 | 0.3266 | 0.7368 | 1.8616 | 0 | 24 | 13 | 37 | 527 | 652 | 690 | 847 | 0 | 2716 | 0.19 | 0.24 | 0.25 | 0.31 | 0 | 0.57 | 0.8889 | 0.2342 | 0.7992 | 1.971 | 0 | 1 | 3 | 4 | 913 | 804 | 922 | 1174 | 0 | 3813 | 0.25 | 0.21 | 0.25 | 0.28 | 0 | 0.54 | 0.9064 | 0.1308 | 0.8797 | 1.9909 | 0 | 44259 | 52945 | 18409 | 29092 | 32209 | 43381 | 38361 | 41415 | 20216 | 28050 | 45621 | 53305 | 33864 | 9834 | 27502 | 27076 | 36310 | 29864 | 29962 | 42600 | 26887 | 27414 | 22390 | 53278 | 30737 | 16539 | 18614 | 42038 | 30033 | 34618 | 25468 | 35396 | 17938 | 25852 | 29282 | 23227 | 16537 | 13449 | 19331 | 17640 | 21190 | 7082 | 52294 | 17856 | 19560 | 39063 | 21295 | 34415 | 23254 | 27310 | 13903 | 10723 | 25012 | 26852 | 25357 | 26188 | 7715 | 8668 | 11289 | 10380 | 37528 | 10461 | 17981 | 11559 |
GCF_001625215.2 | NC_030385 | NC_030385.2 | Daucus carota subsp. sativus chromosome 5; DH1 v3.0; whole genome shotgun sequence. | 15440828 | 15509625 | 8279812 | 8321732 | 4600 | 47556597 | 0.32 | 0.33 | 0.17 | 0.17 | 0 | 0.35 | 0.9435 | 0.0047 | 0.9953 | 1.9332 | 2115 | 2194 | 4309 | 5201962 | 5872555 | 2983586 | 3357659 | 0 | 17415762 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9111 | 0.159 | 0.8582 | 1.947 | 23928 | 1852 | 1908 | 3760 | 1503980 | 1421407 | 1005546 | 1226320 | 0 | 5157253 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8742 | 0.2992 | 0.7584 | 1.9508 | 0 | 2347340 | 2893097 | 1222885 | 1321385 | 0 | 7784707 | 0.29 | 0.4 | 0.15 | 0.16 | 0 | 0.32 | 0.8604 | 0.3092 | 0.75 | 1.8668 | 0 | 216 | 226 | 442 | 158100 | 176040 | 89469 | 106963 | 0 | 530572 | 0.3 | 0.31 | 0.18 | 0.21 | 0 | 0.39 | 0.8746 | 0.3055 | 0.7544 | 1.9309 | 0 | 178145 | 214206 | 88864 | 105711 | 0 | 586926 | 0.29 | 0.4 | 0.14 | 0.17 | 0 | 0.31 | 0.8603 | 0.3347 | 0.7313 | 1.8544 | 0 | 25 | 41 | 66 | 926 | 1156 | 1239 | 1542 | 0 | 4863 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8854 | 0.242 | 0.794 | 1.9655 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 44703 | 52133 | 18328 | 29101 | 32030 | 43133 | 37412 | 41523 | 19762 | 28566 | 45622 | 52415 | 34017 | 9787 | 27269 | 27554 | 35388 | 29672 | 30079 | 43202 | 27034 | 27696 | 22061 | 53471 | 30672 | 16596 | 18506 | 41434 | 29708 | 34569 | 25663 | 35763 | 18087 | 25619 | 29421 | 23072 | 16640 | 12466 | 19257 | 17155 | 21294 | 7018 | 52704 | 17802 | 19865 | 39375 | 20895 | 34351 | 23764 | 27704 | 13528 | 10645 | 24991 | 26299 | 25106 | 26074 | 7881 | 8816 | 11083 | 10583 | 37424 | 10439 | 18064 | 11658 |
GCF_001625215.2 | NC_030386 | NC_030386.2 | Daucus carota subsp. sativus chromosome 6; DH1 v3.0; whole genome shotgun sequence. | 13248341 | 13221330 | 7220339 | 7190462 | 5300 | 40885772 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.35 | 0.9366 | 0.0031 | 0.9969 | 1.9362 | 2048 | 2151 | 4199 | 5027379 | 5656718 | 2915446 | 3293183 | 200 | 16892926 | 0.29 | 0.32 | 0.18 | 0.21 | 0 | 0.39 | 0.9117 | 0.1586 | 0.8583 | 1.9484 | 16958 | 1774 | 1830 | 3604 | 1471764 | 1391550 | 985028 | 1207190 | 0 | 5055532 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8741 | 0.3002 | 0.7576 | 1.9511 | 39 | 2318138 | 2839465 | 1205365 | 1301052 | 100 | 7664120 | 0.29 | 0.39 | 0.15 | 0.16 | 0 | 0.32 | 0.8615 | 0.3029 | 0.7543 | 1.8685 | 0 | 184 | 168 | 352 | 129367 | 144204 | 75896 | 86884 | 0 | 436351 | 0.3 | 0.31 | 0.18 | 0.21 | 0 | 0.39 | 0.8759 | 0.293 | 0.7633 | 1.9326 | 43 | 150160 | 178366 | 78067 | 88604 | 0 | 495197 | 0.29 | 0.4 | 0.15 | 0.17 | 0 | 0.31 | 0.8623 | 0.3186 | 0.7425 | 1.8591 | 0 | 27 | 32 | 59 | 875 | 1037 | 1090 | 1338 | 0 | 4340 | 0.2 | 0.24 | 0.25 | 0.31 | 0 | 0.56 | 0.8822 | 0.2281 | 0.8052 | 1.9688 | 0 | 44 | 97 | 141 | 56594 | 52636 | 55924 | 71364 | 100 | 236618 | 0.24 | 0.22 | 0.25 | 0.29 | 0 | 0.54 | 0.9134 | 0.1327 | 0.8782 | 1.9891 | 0 | 44235 | 51140 | 18046 | 28574 | 32189 | 43066 | 37781 | 40257 | 19167 | 27389 | 44642 | 52128 | 33029 | 9859 | 27123 | 26272 | 34921 | 29593 | 29074 | 41799 | 26670 | 27108 | 21807 | 52630 | 30071 | 16225 | 18078 | 41059 | 28866 | 33746 | 24865 | 35458 | 17412 | 25489 | 28864 | 23190 | 15994 | 12155 | 18424 | 16907 | 20835 | 7019 | 51063 | 17554 | 18761 | 38894 | 20423 | 33370 | 22765 | 27293 | 13631 | 10574 | 24397 | 25868 | 24676 | 25476 | 7616 | 8434 | 10873 | 10266 | 35914 | 9960 | 17908 | 11302 |
GCF_001625215.2 | NC_030387 | NC_030387.2 | Daucus carota subsp. sativus chromosome 7; DH1 v3.0; whole genome shotgun sequence. | 13757369 | 13524566 | 7289446 | 7267820 | 5600 | 41844801 | 0.33 | 0.32 | 0.17 | 0.17 | 0 | 0.35 | 0.9416 | 0.01 | 0.9901 | 1.9321 | 1842 | 1902 | 3744 | 4605752 | 5168965 | 2644608 | 2956611 | 100 | 15376036 | 0.29 | 0.33 | 0.18 | 0.2 | 0 | 0.38 | 0.9106 | 0.16 | 0.8577 | 1.9455 | 12849 | 1589 | 1626 | 3215 | 1316238 | 1245418 | 877788 | 1070626 | 0 | 4510070 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8748 | 0.2989 | 0.7586 | 1.9513 | 1 | 2099373 | 2549813 | 1095370 | 1170595 | 100 | 6915251 | 0.29 | 0.39 | 0.15 | 0.16 | 0 | 0.32 | 0.8611 | 0.3046 | 0.7535 | 1.8677 | 0 | 201 | 231 | 432 | 127932 | 142702 | 74849 | 88879 | 0 | 434362 | 0.29 | 0.31 | 0.18 | 0.21 | 0 | 0.4 | 0.8729 | 0.3029 | 0.7561 | 1.9332 | 0 | 163285 | 199734 | 84237 | 96946 | 0 | 544202 | 0.28 | 0.4 | 0.15 | 0.17 | 0 | 0.31 | 0.86 | 0.3267 | 0.7357 | 1.8581 | 0 | 27 | 21 | 48 | 697 | 842 | 898 | 1130 | 0 | 3567 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8831 | 0.2594 | 0.7795 | 1.9653 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 39004 | 45676 | 16476 | 25407 | 28467 | 37249 | 33134 | 36702 | 17533 | 24544 | 40280 | 46660 | 29616 | 8387 | 24199 | 23500 | 30667 | 25886 | 25895 | 37984 | 23538 | 24192 | 19295 | 47183 | 26250 | 14394 | 16475 | 36899 | 26399 | 30268 | 22366 | 31341 | 15583 | 22947 | 26160 | 20481 | 14698 | 10884 | 17018 | 15073 | 18363 | 6110 | 45738 | 15645 | 16849 | 34022 | 18219 | 30020 | 20620 | 23790 | 11937 | 9092 | 22046 | 23339 | 22090 | 22791 | 6626 | 7580 | 9492 | 9449 | 32102 | 8810 | 15474 | 10066 |
GCF_001625215.2 | NC_030388 | NC_030388.2 | Daucus carota subsp. sativus chromosome 8; DH1 v3.0; whole genome shotgun sequence. | 10863419 | 10881961 | 5812175 | 5808782 | 2100 | 33368437 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.35 | 0.9364 | 0.0011 | 0.9989 | 1.9325 | 1490 | 1912 | 3402 | 3665017 | 4110082 | 2098572 | 2354452 | 300 | 12228423 | 0.28 | 0.31 | 0.19 | 0.22 | 0 | 0.41 | 0.9084 | 0.1539 | 0.8625 | 1.951 | 7273 | 1242 | 1320 | 2562 | 1031879 | 975621 | 688156 | 839659 | 0 | 3535315 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8748 | 0.2981 | 0.7591 | 1.9507 | 0 | 1675133 | 2026396 | 871777 | 935990 | 200 | 5509496 | 0.29 | 0.39 | 0.15 | 0.16 | 0 | 0.32 | 0.8609 | 0.3059 | 0.7528 | 1.8668 | 0 | 164 | 204 | 368 | 106715 | 120481 | 63891 | 73171 | 0 | 364258 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8735 | 0.2985 | 0.7589 | 1.9345 | 0 | 145806 | 172927 | 72830 | 83754 | 100 | 475417 | 0.29 | 0.4 | 0.15 | 0.17 | 0 | 0.31 | 0.8587 | 0.3216 | 0.742 | 1.8583 | 0 | 15 | 16 | 31 | 435 | 544 | 587 | 748 | 0 | 2314 | 0.19 | 0.23 | 0.26 | 0.32 | 0 | 0.58 | 0.8778 | 0.3042 | 0.7444 | 1.9557 | 0 | 52 | 353 | 405 | 10989 | 9787 | 13280 | 14129 | 0 | 48185 | 0.23 | 0.2 | 0.28 | 0.29 | 0 | 0.57 | 0.8983 | 0.0897 | 0.9149 | 1.9845 | 0 | 30408 | 34618 | 12697 | 19727 | 22217 | 28945 | 25152 | 28500 | 13511 | 19800 | 31304 | 36195 | 23032 | 6679 | 18844 | 18606 | 23814 | 19818 | 20759 | 29576 | 18183 | 19308 | 15380 | 35775 | 20686 | 11313 | 13050 | 28877 | 20752 | 24634 | 17787 | 24548 | 12293 | 17992 | 20442 | 15564 | 11482 | 8175 | 13183 | 11680 | 14438 | 4943 | 35831 | 12677 | 13612 | 26469 | 14155 | 23938 | 16623 | 18656 | 9436 | 7213 | 17400 | 18111 | 17322 | 18367 | 5610 | 5930 | 7535 | 7113 | 25805 | 7547 | 13047 | 7953 |
GCF_001625215.2 | NC_030389 | NC_030389.2 | Daucus carota subsp. sativus chromosome 9; DH1 v3.0; whole genome shotgun sequence. | 14897516 | 15020515 | 7947246 | 7978384 | 6900 | 45850561 | 0.32 | 0.33 | 0.17 | 0.17 | 0 | 0.35 | 0.9396 | 0.0061 | 0.994 | 1.9316 | 1729 | 1568 | 3297 | 3980656 | 4410858 | 2240406 | 2523911 | 300 | 13156131 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9094 | 0.1654 | 0.8533 | 1.946 | 56271 | 1455 | 1341 | 2796 | 1155047 | 1092586 | 748777 | 918699 | 0 | 3915109 | 0.3 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8761 | 0.2974 | 0.7596 | 1.9504 | 5 | 1700736 | 2033974 | 874342 | 937544 | 300 | 5546896 | 0.29 | 0.39 | 0.15 | 0.16 | 0 | 0.32 | 0.8603 | 0.3 | 0.7568 | 1.8654 | 0 | 232 | 197 | 429 | 126212 | 140192 | 74260 | 87337 | 0 | 428001 | 0.29 | 0.31 | 0.18 | 0.21 | 0 | 0.4 | 0.875 | 0.3095 | 0.752 | 1.9312 | 2 | 180214 | 219643 | 91885 | 104796 | 0 | 596538 | 0.29 | 0.4 | 0.15 | 0.17 | 0 | 0.31 | 0.8606 | 0.3221 | 0.7399 | 1.8609 | 0 | 20 | 13 | 33 | 477 | 607 | 599 | 773 | 0 | 2456 | 0.19 | 0.25 | 0.24 | 0.32 | 0 | 0.56 | 0.8883 | 0.2753 | 0.7675 | 1.9678 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 35097 | 39461 | 14231 | 21891 | 24071 | 31910 | 26867 | 32709 | 15059 | 21251 | 35637 | 40481 | 25307 | 7346 | 20730 | 21024 | 26197 | 21694 | 22305 | 33466 | 19845 | 20861 | 16263 | 41589 | 21400 | 12491 | 14655 | 33003 | 23407 | 26110 | 19802 | 28112 | 13389 | 20773 | 22871 | 17584 | 12039 | 9094 | 14879 | 12401 | 15551 | 4837 | 41586 | 12822 | 15114 | 29712 | 15590 | 26134 | 18725 | 21099 | 10019 | 7472 | 20560 | 19588 | 18688 | 19569 | 6202 | 6449 | 7902 | 7838 | 28098 | 8117 | 13920 | 8831 |
NA | NC_087060 | NC_087060.1 | Daucus carota subsp. sativus mitochondrion; complete sequence. | 69300 | 68319 | 56264 | 56485 | 0 | 250368 | 0.28 | 0.27 | 0.22 | 0.23 | 0 | 0.45 | 0.9491 | 0.0091 | 0.991 | 1.9928 | 33 | 23 | 56 | 16194 | 16089 | 13205 | 14325 | 0 | 59813 | 0.26 | 0.29 | 0.21 | 0.24 | 0 | 0.46 | 0.8974 | 0.217 | 0.8183 | 1.9659 | 91 | 21 | 12 | 33 | 9861 | 10455 | 7337 | 7483 | 0 | 35136 | 0.28 | 0.3 | 0.2 | 0.22 | 0 | 0.42 | 0.8965 | 0.2227 | 0.8155 | 1.9572 | 91 | 4908 | 4407 | 4640 | 5234 | 0 | 19189 | 0.26 | 0.23 | 0.24 | 0.28 | 0 | 0.52 | 0.9201 | 0.122 | 0.8161 | 1.9887 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11 | 7 | 18 | 314 | 359 | 305 | 383 | 0 | 1361 | 0.23 | 0.26 | 0.22 | 0.28 | 0 | 0.51 | 0.8881 | 0.2077 | 0.8191 | 1.9822 | 0 | 1 | 2 | 3 | 1403 | 1167 | 1200 | 1544 | 0 | 5314 | 0.26 | 0.22 | 0.24 | 0.29 | 0 | 0.52 | 0.9157 | 0.1897 | 0.8292 | 1.9905 | 0 | 266 | 220 | 196 | 210 | 151 | 181 | 233 | 338 | 155 | 171 | 302 | 352 | 214 | 89 | 202 | 180 | 277 | 143 | 295 | 383 | 113 | 231 | 123 | 375 | 95 | 150 | 164 | 207 | 303 | 231 | 259 | 241 | 123 | 238 | 164 | 144 | 79 | 119 | 151 | 129 | 155 | 81 | 370 | 125 | 82 | 226 | 142 | 179 | 105 | 234 | 140 | 80 | 262 | 219 | 113 | 182 | 22 | 89 | 105 | 151 | 219 | 43 | 32 | 154 |
NA | NC_087061 | NC_087061.1 | Daucus carota subsp. sativus plastid; complete sequence. | 48081 | 49044 | 29804 | 28910 | 0 | 155839 | 0.31 | 0.31 | 0.19 | 0.19 | 0 | 0.38 | 0.9375 | 0.0251 | 0.9752 | 1.9556 | 50 | 80 | 130 | 32374 | 32067 | 19516 | 22974 | 0 | 106931 | 0.28 | 0.29 | 0.19 | 0.23 | 0 | 0.42 | 0.8951 | 0.2236 | 0.8083 | 1.9474 | 73 | 29 | 54 | 83 | 23212 | 23818 | 13449 | 15370 | 0 | 75849 | 0.3 | 0.31 | 0.17 | 0.21 | 0 | 0.38 | 0.8884 | 0.263 | 0.784 | 1.9282 | 73 | 2659 | 2455 | 1209 | 1478 | 0 | 7801 | 0.34 | 0.31 | 0.16 | 0.19 | 0 | 0.35 | 0.9027 | 0.1339 | 0.7885 | 1.9243 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17 | 20 | 37 | 614 | 691 | 658 | 823 | 0 | 2786 | 0.22 | 0.25 | 0.24 | 0.3 | 0 | 0.53 | 0.8763 | 0.2372 | 0.8027 | 1.9666 | 0 | 4 | 4 | 8 | 2346 | 1698 | 2140 | 2856 | 0 | 9040 | 0.26 | 0.2 | 0.23 | 0.31 | 0 | 0.53 | 0.9104 | 0.2785 | 0.7587 | 1.9792 | 0 | 589 | 343 | 471 | 529 | 371 | 337 | 608 | 1016 | 323 | 439 | 926 | 962 | 383 | 157 | 401 | 296 | 562 | 197 | 493 | 949 | 165 | 574 | 173 | 828 | 215 | 253 | 358 | 545 | 745 | 673 | 425 | 584 | 176 | 696 | 380 | 196 | 145 | 182 | 189 | 216 | 114 | 97 | 1030 | 189 | 69 | 481 | 295 | 468 | 210 | 453 | 208 | 144 | 826 | 413 | 164 | 296 | 20 | 129 | 156 | 349 | 666 | 56 | 26 | 350 |