GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_009730915.1	NC_052471	NC_052471.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 1; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	9468320	9492693	5643063	5636308	343000	30583384	0.31	0.31	0.18	0.18	0.01	0.37	0.941	0.0019	0.9981	1.9471	648	722	1370	988177	1189828	605210	662644	8000	3453859	0.28	0.32	0.2	0.19	0.4	0.9003	0.2099	0.8182	1.9487	6146	359	412	771	246830	242273	189463	214969	0	893535	0.28	0.27	0.2	0.24	0.45	0.8689	0.3171	0.7475	1.9456	0	457484	597455	241811	265826	5000	1567576	0.27	0.41	0.15	0.16	0.32	0.8523	0.3709	0.7085	1.8468	244	279	523	30236	33032	22551	20241	106060	0.28	0.3	0.23	0.19	0	0.41	0.8806	0.2827	0.7686	1.9502	91	33687	45585	16681	19562	0	115515	0.27	0.42	0.14	0.17	0	0.31	0.854	0.3892	0.6935	1.8403	10	3	13	186	222	239	324	971	0.19	0.23	0.25	0.33	0	0.58	0.8828	0.2774	0.7601	1.9619	0	2	2	67	54	75	79	275	0.25	0.2	0.27	0.29	0	0.56	0.8838	0.1679	0.8481	1.9828	8084	8840	2382	4456	5859	7967	6341	6596	4904	5119	6957	8304	5949	1374	4134	4860	6192	5271	6215	6665	4168	4732	5852	9016	4549	3405	2692	7273	4480	5960	5491	6627	3458	3755	4640	3835	3008	2441	3051	4045	3912	1784	7419	3916	3808	6383	3625	5651	3886	5188	2130	2198	3487	4509	4215	4652	1237	1936	2242	1647	6787	1716	3625	1931
GCF_009730915.1	NC_052472	NC_052472.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 2; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	7511665	7527619	4240783	4252894	272000	23804961	0.32	0.32	0.18	0.18	0.01	0.36	0.9417	0.0025	0.9975	1.9376	520	537	1057	1059742	1244961	638050	695625	13000	3651378	0.28	0.32	0.19	0.2	0.39	0.9023	0.1946	0.8311	1.9436	3897	359	372	731	267208	271999	196936	222166	0	958309	0.28	0.28	0.2	0.24	0.43	0.8687	0.3113	0.7518	1.9438	4	480968	588652	255742	271091	12000	1608453	0.28	0.4	0.15	0.16	0.31	0.8514	0.3451	0.7268	1.8453	115	115	230	21416	24183	14429	14362	74390	0.28	0.3	0.22	0.19	0	0.41	0.8796	0.2983	0.7565	1.9429	0	25235	34808	12661	15044	0	87748	0.27	0.42	0.15	0.17	0	0.32	0.855	0.3715	0.7063	1.8536	4	4	8	133	130	149	189	601	0.22	0.22	0.25	0.31	0	0.56	0.8849	0.2301	0.7972	1.9739	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8216	8745	2581	4963	5613	7928	6397	7897	4769	6108	8721	8906	7023	1209	4648	5910	7395	5316	6775	7472	4487	5569	6058	9221	4466	3312	3393	8823	5140	6660	5934	8395	3271	4412	5000	3982	3231	2187	3141	3513	4200	1371	8005	4119	4122	6553	3691	5700	4196	6031	2045	1806	4499	4897	4147	5026	1435	1839	1886	1608	7188	1865	3695	1802
GCF_009730915.1	NC_052473	NC_052473.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 3; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	6015789	6026494	3406260	3419533	202100	19070176	0.32	0.32	0.18	0.18	0.01	0.36	0.9432	0.0028	0.9972	1.9387	471	462	933	1031507	1226809	630496	690687	3000	3582499	0.28	0.33	0.19	0.2	0.39	0.9034	0.2008	0.8253	1.9426	7943	307	312	619	231025	227801	172955	195549	0	827330	0.28	0.28	0.2	0.24	0.44	0.8699	0.3045	0.7552	1.9459	0	449606	561388	243201	261314	2000	1517509	0.28	0.41	0.15	0.16	0.31	0.851	0.3606	0.7166	1.8453	113	111	224	32795	39911	22886	24194	119786	0.28	0.31	0.2	0.2	0	0.41	0.8703	0.3206	0.7428	1.9355	0	56303	68867	30042	33464	0	188676	0.27	0.42	0.15	0.17	0	0.31	0.8534	0.3763	0.7054	1.8397	4	0	4	50	67	80	94	291	0.17	0.23	0.27	0.32	0	0.6	0.8802	0.2247	0.8018	1.9608	0	1	1	737	573	945	1138	3393	0.22	0.17	0.28	0.34	0	0.61	0.9039	0.2178	0.8039	1.954	7485	8170	2279	4318	4924	7273	5674	6320	4335	4836	6369	7543	5746	1254	3872	4443	5840	4661	5615	6281	3924	4416	5280	8169	4271	3002	2582	7129	4421	5063	5013	6087	3191	3723	4467	3601	2729	2130	2836	3494	3542	1521	7277	3328	3661	5569	3094	5395	3572	4924	2062	1845	3754	4430	3961	4181	1316	1790	2014	1593	6124	1763	3625	1852
GCF_009730915.1	NC_052474	NC_052474.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 4; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	7024600	7028670	4003436	4021154	219000	22296860	0.32	0.32	0.18	0.18	0.01	0.36	0.9456	0.0025	0.9975	1.9405	876	846	1722	1662524	2043704	1052130	1164929	10000	5933287	0.28	0.33	0.19	0.2	0.39	0.9052	0.1978	0.8272	1.9465	8098	662	627	1289	432137	427421	344066	389028	0	1592652	0.28	0.27	0.2	0.24	0.45	0.8689	0.3147	0.748	1.9482	0	757193	1023051	412276	453379	9000	2654899	0.27	0.41	0.15	0.16	0.32	0.8531	0.3638	0.7134	1.8502	129	135	264	25166	28923	17877	17537	89503	0.28	0.3	0.21	0.2	0	0.42	0.8712	0.3204	0.7436	1.9384	0	41215	54563	21024	24386	0	141188	0.27	0.42	0.14	0.17	0	0.31	0.8553	0.3692	0.7105	1.8388	10	6	16	228	276	295	384	1183	0.19	0.23	0.25	0.33	0	0.57	0.8897	0.241	0.7908	1.9676	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	14344	15629	4167	8135	10016	15216	11673	11251	8673	9262	11482	14499	10354	2560	7057	8536	11293	9757	11192	11192	8296	8394	10534	15614	9164	5972	4882	12801	7810	10271	9675	11832	6222	6445	8002	7604	5585	4439	5641	7522	7016	3500	12719	7121	7180	10988	6547	9942	6559	9209	3968	4114	6008	8573	7797	8244	2175	3703	4117	3157	11152	2766	6128	3356
GCF_009730915.1	NC_052475	NC_052475.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 5; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	10433899	10445562	5797833	5788662	287000	32752956	0.32	0.32	0.18	0.18	0.01	0.35	0.944	0.0014	0.9987	1.9356	1304	1267	2571	2576712	3168111	1618494	1798648	14000	9175965	0.28	0.33	0.19	0.2	0.39	0.9054	0.2009	0.8244	1.9459	12740	1031	983	2014	696927	691885	545841	623018	0	2557671	0.28	0.27	0.2	0.24	0.45	0.8701	0.3104	0.7511	1.9488	0	1129468	1533341	610055	676968	6000	3955832	0.27	0.41	0.15	0.16	0.32	0.8529	0.3645	0.7123	1.8507	179	178	357	44287	51520	29782	31803	157392	0.28	0.31	0.2	0.21	0	0.41	0.8694	0.319	0.7446	1.9364	7	90340	120145	48106	56672	0	315263	0.27	0.41	0.15	0.17	0	0.32	0.8567	0.3685	0.7099	1.8501	17	21	38	540	671	706	918	2835	0.19	0.24	0.25	0.32	0	0.57	0.8916	0.2773	0.765	1.9635	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	22968	25329	6941	13296	16219	23221	18720	18468	13305	14850	18678	22695	17037	4026	11802	13535	18154	15675	17945	18019	13253	13799	16245	24980	14557	9610	8015	20527	12780	16706	15485	19293	9915	10878	13140	11768	8817	6880	8832	11546	11180	5087	20129	11421	11607	17881	10740	16309	10956	14896	6191	6335	9984	13728	12889	13670	3597	5716	6208	4923	17748	4697	10659	5179
GCF_009730915.1	NC_052476	NC_052476.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 6; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	6898505	6886515	3865436	3857373	230010	21737839	0.32	0.32	0.18	0.18	0.01	0.36	0.943	0.0019	0.9981	1.9365	617	577	1194	1179123	1438811	706859	792550	12000	4129343	0.28	0.33	0.19	0.2	0.39	0.9015	0.2192	0.8109	1.9383	3680	395	404	799	255127	250531	189945	223126	0	918729	0.28	0.28	0.2	0.24	0.44	0.8667	0.3309	0.7372	1.9438	0	535318	705843	285050	313529	8000	1847740	0.27	0.41	0.15	0.16	0.31	0.8519	0.3697	0.7094	1.8451	154	115	269	25752	28963	17563	18550	90828	0.29	0.3	0.21	0.21	0	0.41	0.8724	0.3304	0.7363	1.9371	0	58207	75075	29167	33912	0	196361	0.27	0.42	0.14	0.16	0	0.3	0.8544	0.3875	0.6967	1.8303	6	9	15	212	281	275	356	1124	0.19	0.25	0.24	0.32	0	0.56	0.8885	0.2978	0.7501	1.9635	2	1	3	111	101	125	129	466	0.24	0.22	0.27	0.28	0	0.55	0.8765	0.0931	0.9133	1.991	8286	9355	2720	4584	5642	8140	6534	6913	4641	5532	6867	8717	5933	1455	4177	4649	6293	5545	6284	6888	4541	4862	5409	9027	5014	3319	2965	7799	4537	5864	5605	6944	3512	4010	4762	3847	2894	2298	3011	3788	4025	1776	7848	3922	4134	6444	3574	6219	4130	5485	2367	2198	3663	4616	4553	4525	1521	2097	2207	1760	6876	1793	4065	2098
GCF_009730915.1	NC_052477	NC_052477.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 7; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	9963132	10000655	5717182	5733198	358210	31772377	0.31	0.31	0.18	0.18	0.01	0.36	0.9426	0.0033	0.9967	1.9406	871	849	1720	1619238	1942454	998145	1103328	9000	5672165	0.28	0.33	0.19	0.2	0.39	0.9034	0.1992	0.8263	1.9462	1819	608	537	1145	384605	381381	292890	334069	0	1392945	0.28	0.27	0.2	0.24	0.44	0.8696	0.3085	0.7522	1.9494	0	651189	846471	347246	381592	6000	2232498	0.28	0.41	0.15	0.17	0.32	0.8533	0.3615	0.7155	1.851	172	227	399	39366	43132	26774	27427	136699	0.29	0.3	0.21	0.2	0	0.41	0.8721	0.3049	0.7536	1.9395	0	69441	91239	35951	41040	1000	238671	0.27	0.42	0.14	0.16	0	0.31	0.8538	0.3672	0.7104	1.8404	5	10	15	232	278	265	328	1103	0.21	0.25	0.24	0.3	0	0.54	0.8907	0.2352	0.7977	1.98	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12686	13921	3776	7259	8393	12501	9987	10528	7286	8011	10522	12745	9241	2166	6401	7364	9745	8481	9793	10099	7295	7247	8829	13610	7441	5090	4787	12106	7124	9210	8669	10862	5534	6129	7430	6245	4660	3487	4697	6151	6107	2596	11712	6067	6138	9806	5465	9093	5893	8131	3260	3097	5875	6924	6529	7129	1939	2900	3301	2668	10208	2497	5179	2868
GCF_009730915.1	NC_052478	NC_052478.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 8; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	6991347	6990862	3995890	3967164	141000	22086263	0.32	0.32	0.18	0.18	0.01	0.36	0.9449	0.0036	0.9964	1.9418	733	785	1518	1423684	1724084	894209	992527	8000	5042504	0.28	0.33	0.19	0.2	0.4	0.9034	0.2078	0.8194	1.9466	1716	552	587	1139	396644	392051	306076	348631	0	1443402	0.28	0.27	0.2	0.24	0.44	0.8701	0.3143	0.7486	1.9484	0	644672	852057	351582	388670	7000	2243981	0.27	0.41	0.15	0.16	0.32	0.8542	0.3633	0.7132	1.852	133	147	280	26214	29554	19330	18890	93988	0.28	0.3	0.22	0.2	0	0.42	0.8735	0.3139	0.7469	1.9418	0	45436	57346	22744	26589	0	152115	0.27	0.42	0.15	0.17	0	0.31	0.852	0.3893	0.6946	1.8432	6	9	15	201	264	292	364	1121	0.18	0.23	0.26	0.33	0	0.59	0.8807	0.2924	0.7537	1.9534	2	0	2	68	57	71	79	275	0.25	0.21	0.26	0.29	0	0.54	0.8867	0.1446	0.8663	1.9886	13190	14845	4055	7497	9174	13119	10626	10700	7555	8395	10899	13194	9789	2137	6545	7600	10185	8821	9990	10470	7523	7926	9237	14100	8123	5289	4709	11942	6975	9155	8985	11012	5757	5985	7454	6367	4881	3713	4846	6638	6448	2786	12111	6244	6487	10142	5716	8993	6035	8306	3340	3338	5814	7528	7076	7475	2024	3141	3391	2738	10482	2455	5269	2906
GCF_009730915.1	NC_052479	NC_052479.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 9; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	9632581	9666012	5691213	5699892	421100	31110798	0.31	0.31	0.18	0.18	0.01	0.37	0.9421	0.0025	0.9975	1.9445	638	683	1321	1169609	1413750	712920	784690	6000	4086969	0.28	0.33	0.2	0.19	0.39	0.9025	0.2118	0.8166	1.9448	779	384	406	790	260952	256681	197807	226467	0	941907	0.28	0.27	0.2	0.24	0.44	0.8687	0.3145	0.748	1.9475	0	558418	719002	302984	327904	5000	1913308	0.27	0.41	0.15	0.17	0.32	0.8541	0.3648	0.7127	1.8506	206	220	426	27763	31190	20413	18859	98225	0.29	0.3	0.22	0.2	0	0.41	0.8765	0.3045	0.7548	1.9412	0	47272	63179	25043	29310	0	164804	0.27	0.42	0.14	0.16	0	0.3	0.85	0.3751	0.7042	1.8317	11	15	26	407	499	462	596	1964	0.21	0.25	0.24	0.3	0	0.54	0.8901	0.2394	0.7928	1.9765	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8541	9341	2770	5059	5875	8302	6710	7002	4809	5491	7164	8760	6284	1469	4390	5007	6710	5525	6542	6843	4350	5164	5761	9112	5010	3438	2927	7507	4968	6104	5675	6941	3635	3933	4916	4066	3083	2407	3232	4259	4082	1708	8017	3987	4093	6902	3773	6136	4166	5675	2429	2156	3894	4962	4573	4955	1391	2111	2339	1864	6985	1856	3727	2009
GCF_009730915.1	NC_052480	NC_052480.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 10; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	7421017	7407705	4207970	4218512	231000	23486204	0.32	0.32	0.18	0.18	0.01	0.36	0.9429	0.0021	0.9979	1.9396	570	587	1157	893383	1082513	545887	608627	4000	3134410	0.28	0.32	0.2	0.2	0.4	0.9017	0.2056	0.8217	1.9474	3495	367	346	713	225558	219872	172122	196168	0	813720	0.28	0.27	0.2	0.24	0.44	0.8682	0.3147	0.7486	1.9461	0	387316	508420	200434	224232	4000	1324402	0.28	0.41	0.15	0.16	0.31	0.8499	0.3642	0.7133	1.842	151	143	294	24183	27383	17587	17013	86166	0.28	0.3	0.21	0.2	0	0.42	0.8694	0.3348	0.7346	1.936	0	36106	50526	18563	21570	0	126765	0.27	0.43	0.14	0.16	0	0.3	0.8466	0.3988	0.6883	1.8231	5	6	11	149	203	207	275	834	0.18	0.24	0.25	0.33	0	0.58	0.8956	0.3093	0.7372	1.96	19	56	75	2111	1839	2344	2602	8896	0.24	0.21	0.26	0.29	0	0.56	0.895	0.126	0.8835	1.9859	7458	8121	2248	4449	5073	7296	5990	6023	4219	4586	6100	7474	5363	1271	3645	4550	5792	4879	5513	5882	3950	4468	5064	8311	4476	2987	2594	6559	4104	5354	4920	6105	3096	3461	4202	3725	2939	2093	2737	3591	3732	1560	6743	3473	3506	5627	3161	5449	3415	4890	1945	1777	3213	4191	4115	4269	1097	1878	1963	1598	5816	1522	2933	1740
GCF_009730915.1	NC_052481	NC_052481.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 11; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	7173955	7177181	4110591	4106242	191010	22758979	0.32	0.32	0.18	0.18	0.01	0.36	0.941	0.0008	0.9992	1.9418	657	661	1318	1159690	1402043	717386	797792	4000	4080911	0.28	0.33	0.19	0.2	0.39	0.9041	0.2063	0.8206	1.9465	6798	467	454	921	310653	309098	241158	273377	0	1134286	0.28	0.28	0.2	0.24	0.44	0.8688	0.3165	0.7469	1.9466	0	519658	679253	273477	306939	4000	1783327	0.27	0.41	0.15	0.17	0.32	0.8512	0.3792	0.7037	1.847	151	160	311	27365	31532	20205	19886	98988	0.28	0.31	0.21	0.2	0	0.42	0.8774	0.3049	0.7538	1.9435	0	47554	62740	24763	28779	0	163836	0.26	0.42	0.15	0.17	0	0.32	0.8582	0.3897	0.6945	1.8507	4	7	11	160	204	197	257	818	0.19	0.25	0.24	0.32	0	0.56	0.8624	0.3151	0.7413	1.9564	0	1	1	37	28	46	46	157	0.24	0.18	0.29	0.29	0	0.59	0.8682	0.1385	0.8784	1.9728	10384	11156	3048	5733	7053	10297	8273	8418	6001	6346	8669	10453	7462	1742	5256	6247	7983	6852	7845	8299	5355	6109	7259	11236	5871	4139	3818	9446	5684	7299	6939	8895	4431	4869	5754	5082	3895	3092	3850	5214	4972	2320	9184	5042	4812	8240	4603	7154	4680	6667	2797	2769	4591	6118	5502	5816	1431	2516	2689	2258	8205	1912	4368	2444
GCF_009730915.1	NC_052482	NC_052482.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 12; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	6973793	6974541	3912798	3924709	161010	21946851	0.32	0.32	0.18	0.18	0.01	0.36	0.9414	0.0016	0.9984	1.9388	601	665	1266	1183444	1425540	729238	797489	5010	4140721	0.28	0.33	0.19	0.2	0.39	0.9032	0.2051	0.8218	1.9456	1492	386	469	855	285277	279435	222425	246747	0	1033884	0.28	0.27	0.2	0.24	0.45	0.8702	0.3099	0.7516	1.9483	0	551855	705235	296135	319300	4010	1876535	0.27	0.41	0.15	0.16	0.32	0.8543	0.3629	0.7149	1.8507	160	150	310	32969	39334	22918	24446	119667	0.28	0.3	0.21	0.21	0	0.42	0.8731	0.3226	0.7423	1.9381	0	50132	67060	25089	30100	0	172381	0.27	0.42	0.14	0.17	0	0.31	0.8532	0.3929	0.6922	1.8343	11	9	20	273	352	380	468	1473	0.18	0.24	0.26	0.32	0	0.58	0.8784	0.2567	0.7839	1.9632	0	1	1	40	32	40	44	156	0.26	0.21	0.26	0.28	0	0.54	0.8747	0.1587	0.8545	1.9907	9130	10292	2747	5634	6309	9359	7192	7337	5849	5944	7842	9284	6838	1746	4738	6108	7150	5951	7453	7399	5044	5369	6962	10027	5529	3925	3316	8384	5165	6679	6519	7877	4033	4279	5231	4770	3547	2784	3830	4584	4619	2078	8551	4485	4479	6897	4225	6516	4246	6093	2567	2460	4212	5446	4863	5284	1585	2280	2618	1923	7703	2030	4060	2176
GCF_009730915.1	NC_052483	NC_052483.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 13; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	2623609	2662061	1482796	1483656	92000	8344122	0.31	0.32	0.18	0.18	0.01	0.36	0.9448	0.0076	0.9925	1.9366	270	225	495	503538	597594	316496	350890	2000	1770518	0.28	0.32	0.19	0.21	0.4	0.9048	0.1961	0.8288	1.9485	3660	187	155	342	120422	118637	90550	104917	0	434526	0.28	0.27	0.2	0.25	0.45	0.8691	0.3175	0.7473	1.9466	0	183140	234391	99383	110398	1000	628312	0.27	0.41	0.15	0.16	0.32	0.8529	0.3627	0.7139	1.8526	37	38	75	10922	12131	7389	7739	38181	0.29	0.3	0.2	0.21	0	0.41	0.8633	0.3495	0.7245	1.93	0	25038	33362	13043	15284	0	86727	0.27	0.42	0.14	0.17	0	0.31	0.8581	0.3558	0.7184	1.8477	5	4	9	140	163	158	198	659	0.21	0.25	0.24	0.3	0	0.54	0.8838	0.1891	0.8317	1.9824	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	3971	4445	1209	2265	2656	4364	3149	3189	2215	2497	3424	4415	2912	622	1979	2290	2976	2750	3110	3160	2014	2402	2856	4634	2266	1629	1396	3751	2191	2640	2626	3508	1669	1806	2151	2129	1435	980	1505	1916	1846	831	3698	1866	1796	3045	1705	2688	1890	2594	952	923	1820	2112	2031	2289	487	880	983	860	3105	645	1359	959
GCF_009730915.1	NC_052484	NC_052484.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 14; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	6908024	6957659	3680819	3703702	147010	21397214	0.32	0.33	0.17	0.17	0.01	0.35	0.9438	0.0067	0.9933	1.9284	716	654	1370	1474735	1805846	900976	993134	5000	5179691	0.28	0.34	0.18	0.2	0.38	0.9037	0.1993	0.8262	1.9399	3059	564	515	1079	368421	365240	280532	317636	0	1331829	0.28	0.28	0.2	0.24	0.44	0.8687	0.3129	0.7495	1.9466	0	717315	943815	377218	414803	3000	2456151	0.28	0.41	0.15	0.16	0.31	0.8529	0.3569	0.7184	1.8455	86	78	164	20992	23975	14044	15167	74178	0.28	0.31	0.2	0.21	0	0.41	0.8658	0.3472	0.727	1.9266	195	30743	42342	16550	18303	0	107938	0.27	0.43	0.14	0.16	0	0.3	0.8479	0.4034	0.6855	1.8253	11	9	20	294	359	375	484	1512	0.19	0.24	0.25	0.32	0	0.57	0.8737	0.2768	0.7673	1.9617	0	2	2	74	60	88	90	312	0.24	0.19	0.28	0.29	0	0.57	0.8747	0.1156	0.8945	1.981	12221	13191	3645	6984	8514	11769	9566	10106	6912	7691	10269	12289	8942	2014	6090	7128	9371	7759	9404	9985	6770	6808	8414	13202	7231	4859	4296	11198	6766	8489	7949	10356	5099	5677	6914	5841	4516	3407	4483	5693	5626	2509	11378	5704	5745	9543	5133	8591	5795	7831	3207	3049	5565	6993	6141	6960	1909	2868	3128	2504	9797	2457	5180	2960
GCF_009730915.1	NC_052485	NC_052485.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 15; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	7532918	7465672	4165643	4142090	135000	23441323	0.32	0.32	0.18	0.18	0.01	0.35	0.9445	0.0073	0.9927	1.9368	736	733	1469	1496760	1793349	922284	1022529	16000	5250922	0.28	0.33	0.19	0.2	0.39	0.9044	0.1955	0.8293	1.9459	14776	568	582	1150	399311	391349	307986	351584	0	1450230	0.28	0.27	0.2	0.24	0.44	0.8705	0.3082	0.753	1.9479	0	726783	946177	392464	427554	12000	2504978	0.27	0.41	0.15	0.16	0.31	0.8513	0.3658	0.713	1.8454	121	106	227	24061	27851	16074	16836	84822	0.28	0.3	0.21	0.21	0	0.41	0.8723	0.3252	0.7402	1.9373	0	41056	55347	21001	25240	1000	143644	0.27	0.41	0.15	0.17	0	0.31	0.8565	0.3555	0.7185	1.8514	8	5	13	193	231	251	292	967	0.2	0.24	0.26	0.3	0	0.56	0.8947	0.2158	0.8126	1.9669	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13016	14875	4075	7684	8974	13383	10424	10495	7633	8422	10807	13200	9586	2469	6533	8156	10045	8796	10150	10170	7191	7803	9166	14696	8033	5583	4612	12155	7327	9335	9085	10848	5691	6164	7406	6958	4749	3790	4971	6590	6266	2800	11979	6390	6369	10027	5854	9322	6163	8050	3429	3499	5786	7678	7035	7532	1963	3195	3598	2921	10339	2415	5220	3044
GCF_009730915.1	NC_052486	NC_052486.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 16; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	7545238	7537816	4376166	4376899	273257	24109376	0.31	0.31	0.18	0.18	0.01	0.36	0.9429	0.0006	0.9994	1.9427	610	628	1238	1254491	1503737	761604	845478	8000	4373310	0.28	0.33	0.19	0.2	0.39	0.9034	0.208	0.8192	1.9448	81947	381	398	779	258352	254457	196693	223867	0	933369	0.28	0.27	0.2	0.24	0.44	0.8694	0.3151	0.7471	1.9464	20	510408	658721	275858	302308	3000	1750295	0.27	0.41	0.15	0.16	0.32	0.8546	0.3571	0.7185	1.8517	158	164	322	30353	34334	21637	21907	108231	0.28	0.3	0.21	0.21	0	0.42	0.8713	0.3239	0.741	1.9388	0	59764	79582	30312	36460	0	206118	0.27	0.42	0.14	0.17	0	0.31	0.8486	0.4078	0.6844	1.8355	11	5	16	234	289	285	374	1182	0.2	0.24	0.24	0.32	0	0.56	0.8769	0.2775	0.7679	1.9626	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8324	9169	2566	4919	5898	8215	6876	7309	4783	5289	7368	8772	6165	1444	4408	4888	6642	5404	6329	6753	4415	5259	5761	9423	4872	3362	3122	7507	4725	6041	5633	7253	3637	3980	4916	4196	3142	2361	3052	4204	4088	1847	8029	4164	4153	6627	3601	5811	3974	5463	2252	2159	3816	4880	4412	4763	1247	2134	2212	1911	6958	1673	3524	2031
GCF_009730915.1	NC_052487	NC_052487.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 17; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	7142890	7143400	3960371	3945082	167000	22358743	0.32	0.32	0.18	0.18	0.01	0.35	0.9435	0.002	0.998	1.9358	670	692	1362	1308539	1567256	805246	892356	4000	4577397	0.28	0.33	0.19	0.2	0.39	0.9039	0.2015	0.8247	1.9439	5994	512	522	1034	377651	367875	284476	323547	0	1353549	0.28	0.28	0.2	0.24	0.44	0.8696	0.3075	0.7537	1.9484	1	564166	735991	297930	321870	3000	1922957	0.27	0.41	0.15	0.16	0.31	0.8505	0.3698	0.7098	1.8443	119	125	244	26057	30034	18192	19305	93588	0.28	0.3	0.21	0.21	0	0.42	0.8695	0.3385	0.7324	1.9333	0	59194	80478	30798	35950	0	206420	0.27	0.42	0.15	0.17	0	0.31	0.8559	0.3891	0.695	1.8414	3	2	5	71	92	89	115	367	0.19	0.25	0.24	0.31	0	0.56	0.883	0.2638	0.7733	1.9707	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	12086	13687	3619	7259	8414	12407	9657	10012	6868	7701	10431	12971	9387	2020	6337	7803	9690	8044	9435	9798	6553	7276	8402	13581	7427	4966	4393	11352	6868	9029	8365	10331	5153	5916	7312	6088	4482	3391	4662	5790	5860	2458	11265	5768	5788	9532	5136	8935	5701	7705	3083	2885	5413	7259	6445	7324	1858	2796	3201	2357	9892	2353	5290	2576
GCF_009730915.1	NC_052488	NC_052488.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 18; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	7762434	7742330	4312726	4290464	173000	24280954	0.32	0.32	0.18	0.18	0.01	0.35	0.9424	0.0039	0.9961	1.9365	650	760	1410	1261356	1532605	790581	876294	5000	4465836	0.28	0.32	0.19	0.2	0.4	0.904	0.2019	0.8241	1.9468	3868	477	560	1037	356742	350515	275272	313126	0	1295655	0.28	0.27	0.2	0.24	0.45	0.8697	0.3061	0.7533	1.9478	1	550390	729483	294011	323076	4000	1900960	0.27	0.41	0.15	0.16	0.31	0.8502	0.3694	0.7103	1.8448	131	145	276	26273	30680	18371	19240	94564	0.28	0.31	0.21	0.2	0	0.41	0.8738	0.3203	0.7431	1.9385	0	43604	61104	22334	27117	1000	155159	0.27	0.42	0.14	0.17	0	0.31	0.8566	0.3749	0.703	1.8399	7	9	16	215	287	299	383	1184	0.18	0.24	0.25	0.32	0	0.58	0.8804	0.2966	0.7527	1.9564	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11790	12941	3646	6816	7992	11997	9519	9483	6932	7416	9627	11821	8528	2088	5796	7067	8942	7856	8952	9144	6517	7015	8168	12587	7150	4904	4099	10383	6485	8316	7958	9800	5174	5413	6634	5997	4504	3418	4596	6009	5523	2493	10871	5751	5853	9252	5112	8265	5584	7358	3030	3028	5242	6734	6158	6467	1831	2829	3273	2494	9561	2438	5266	2630
GCF_009730915.1	NC_052489	NC_052489.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 19; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	10065370	10049205	5678209	5658211	160010	31611005	0.32	0.32	0.18	0.18	0.01	0.36	0.9426	0.0026	0.9974	1.9405	1155	1197	2352	2329546	2845803	1460996	1622669	13000	8272014	0.28	0.33	0.19	0.2	0.39	0.905	0.2009	0.8247	1.9469	13424	876	919	1795	636209	627772	495350	565877	0	2325208	0.28	0.27	0.2	0.24	0.44	0.8699	0.3149	0.748	1.9474	52	1050362	1406207	568584	626710	11000	3662863	0.27	0.41	0.15	0.16	0.32	0.8532	0.3593	0.7161	1.852	200	197	397	42138	48803	27963	29262	148166	0.29	0.3	0.21	0.2	0	0.41	0.8719	0.3212	0.7427	1.9369	0	68793	87814	35145	40577	0	232329	0.27	0.42	0.15	0.16	0	0.31	0.8536	0.384	0.6976	1.8367	8	13	21	311	357	402	493	1563	0.2	0.23	0.26	0.32	0	0.57	0.8833	0.2564	0.7825	1.9632	1	1	2	802	623	998	1140	3563	0.22	0.18	0.28	0.31	0	0.6	0.896	0.1659	0.8483	1.9686	20842	23766	6456	11923	14936	21980	16973	16820	12381	12967	16987	21354	15008	3559	10369	12270	16369	14486	16124	16590	12047	12365	15206	23086	13053	8679	7336	19139	11366	15010	14328	17816	9290	9428	11990	10676	7827	6193	8148	11037	9981	4780	19173	10233	10243	16473	9391	14912	9572	13213	5518	5587	9042	12337	11510	11934	3225	5173	5449	4426	16150	4117	9133	4833
GCF_009730915.1	NC_052490	NC_052490.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 20; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	10344801	10345153	5945079	5925482	463010	33023525	0.31	0.31	0.18	0.18	0.01	0.36	0.932	0.0017	0.9983	1.9392	604	611	1215	900738	1084281	560119	609717	5010	3159865	0.28	0.32	0.21	0.19	0.4	0.9024	0.2076	0.8206	1.9498	1391	324	329	653	226220	221990	173676	196538	0	818424	0.28	0.27	0.2	0.24	0.44	0.8683	0.3124	0.75	1.947	0	428330	552822	234175	251134	5010	1471471	0.27	0.41	0.15	0.16	0.32	0.8521	0.367	0.7124	1.8478	255	257	512	27369	30857	20387	19008	97621	0.28	0.3	0.22	0.19	0	0.42	0.8839	0.2753	0.7737	1.9516	0	27211	38869	13999	17190	0	97269	0.26	0.42	0.14	0.17	0	0.32	0.8585	0.3943	0.6892	1.8474	5	9	14	204	259	248	328	1039	0.2	0.25	0.24	0.32	0	0.55	0.8925	0.2724	0.7676	1.9673	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7547	8247	2147	4270	4938	7357	5774	6041	4383	4886	6159	7496	5528	1283	3785	4485	5792	4905	5851	5808	4071	4233	5205	7792	4305	3127	2653	6647	4157	5302	4943	6027	3142	3457	4380	3642	2888	2104	2889	3706	3587	1582	6797	3646	3572	5820	3189	5344	3431	4722	1880	2013	3360	4324	3973	4344	1228	1763	1984	1557	5886	1639	3336	1577
GCF_009730915.1	NC_052491	NC_052491.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 21; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	1249563	1246841	759794	755133	40000	4051331	0.31	0.31	0.19	0.19	0.01	0.37	0.9379	0.0042	0.9958	1.9512	84	91	175	166199	184319	94875	103947	1000	550340	0.29	0.32	0.2	0.2	0.4	0.9017	0.2005	0.8256	1.9466	40	37	41	78	27003	26021	17048	21779	0	91851	0.29	0.28	0.19	0.25	0.43	0.8696	0.2988	0.7587	1.9429	0	96475	107613	54257	55442	0	313787	0.28	0.4	0.15	0.16	0.31	0.8592	0.3352	0.7331	1.8524	41	40	81	7868	8673	5036	5236	26813	0.29	0.3	0.21	0.2	0	0.41	0.8768	0.2833	0.769	1.9452	0	11486	15069	5350	6281	0	38186	0.29	0.42	0.14	0.15	0	0.29	0.8514	0.3115	0.7457	1.8355	5	4	9	151	169	162	198	680	0.22	0.25	0.24	0.29	0	0.53	0.8978	0.1682	0.8495	1.9798	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	872	863	330	453	601	817	566	816	361	563	902	1014	627	110	439	459	497	555	532	688	406	546	473	1066	395	284	360	949	552	493	546	712	317	502	444	375	252	206	254	289	340	144	1043	338	381	682	394	626	516	532	151	160	543	421	443	432	100	157	173	175	695	144	298	178
GCF_009730915.1	NC_052492	NC_052492.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 22; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	153990	163229	88568	92085	8000	505872	0.3	0.32	0.18	0.18	0.02	0.36	0.9408	0.0486	0.9526	1.9364	47	32	79	80926	104198	53297	59832	0	298253	0.27	0.34	0.18	0.21	0.39	0.9079	0.2055	0.8214	1.9445	0	42	26	68	28982	29441	21444	25481	0	105348	0.28	0.28	0.2	0.25	0.44	0.8737	0.2896	0.7643	1.9547	0	35392	52575	20640	22366	0	130973	0.26	0.42	0.16	0.17	0.33	0.8539	0.3797	0.7005	1.8581	1	2	3	356	333	206	215	1110	0.3	0.3	0.19	0.21	0	0.4	0.8829	0.1222	0.8931	1.9565	0	86	125	51	43	0	305	0.28	0.41	0.17	0.14	0	0.31	0.8638	0.3338	0.7169	1.8659	1	1	2	27	37	35	47	146	0.18	0.25	0.24	0.32	0	0.56	0.8739	0.3053	0.7363	1.9705	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	928	965	302	589	672	848	810	799	467	607	766	961	791	140	541	550	805	674	652	783	648	588	535	1062	624	352	340	936	543	729	601	831	354	488	553	438	357	246	334	411	437	134	871	432	522	771	402	632	503	577	234	219	472	564	543	533	188	229	225	191	759	227	502	201
GCF_009730915.1	NC_052493	NC_052493.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 23; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	29134	28549	13504	14159	1000	86346	0.34	0.33	0.16	0.16	0.01	0.32	0.9272	0.0338	0.9668	1.9031	1	1	2	5254	5547	2221	2651	0	15673	0.31	0.38	0.13	0.18	0.31	0.8984	0.2487	0.7907	1.8734	0	1	0	1	220	151	104	173	0	648	0.36	0.23	0.16	0.25	0.41	0.8391	0.45	0.6524	1.9221	0	4350	4301	1800	2013	0	12464	0.31	0.38	0.15	0.15	0.31	0.8713	0.2261	0.803	1.8752	0	1	1	58	95	42	61	256	0.25	0.34	0.18	0.24	0	0.42	0.814	0.5184	0.6013	1.9157	0	520	805	214	328	0	1867	0.28	0.43	0.11	0.18	0	0.29	0.8807	0.4436	0.6412	1.8363	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	11	3	3	5	14	8	7	1	0	10	18	3	1	1	3	2	1	4	5	2	1	4	3	2	2	0	6	1	5	2	7	2	1	5	2	1	0	1	3	2	2	7	3	2	4	4	5	1	7	1	0	1	1	5	0	0	0	2	1	3	1	6	1
GCF_009730915.1	NC_052494	NC_052494.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 24; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	324356	330200	166652	168195	13000	1002403	0.32	0.33	0.17	0.17	0.01	0.33	0.937	0.0135	0.9866	1.9169	63	55	118	132191	163731	82139	92312	0	470373	0.27	0.34	0.18	0.2	0.38	0.9049	0.2096	0.8172	1.9408	34	52	40	92	33445	33657	25335	29333	0	121770	0.28	0.28	0.2	0.24	0.44	0.8694	0.3131	0.7505	1.945	0	49582	68784	26865	29734	0	174965	0.27	0.41	0.15	0.17	0.32	0.8548	0.3584	0.7169	1.8596	4	10	14	1294	1583	847	1017	4741	0.28	0.32	0.19	0.22	0	0.4	0.8459	0.3424	0.7291	1.9257	0	3087	4483	1641	1848	0	11059	0.26	0.43	0.14	0.16	0	0.3	0.8434	0.4344	0.6716	1.8147	1	0	1	15	18	22	19	74	0.2	0.24	0.3	0.26	0	0.55	0.9099	0.1641	0.8485	1.9867	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1067	1205	322	647	739	1159	975	882	570	616	946	1222	886	197	607	592	922	674	859	924	647	636	666	1279	742	389	368	1088	620	710	672	975	435	483	600	531	371	284	403	522	528	217	1032	475	459	937	483	764	520	742	379	278	551	682	622	650	156	297	318	240	881	183	405	224
GCF_009730915.1	NC_052495	NC_052495.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 25; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	250764	257968	129809	134877	10000	783418	0.32	0.33	0.17	0.17	0.01	0.34	0.9348	0.0333	0.9672	1.9205	53	48	101	102022	128463	66309	75269	0	372063	0.27	0.33	0.19	0.21	0.4	0.9058	0.2135	0.8136	1.9488	0	43	44	87	34195	33190	26599	30237	0	124221	0.28	0.27	0.2	0.25	0.45	0.8699	0.3117	0.749	1.9482	0	44476	63879	25395	28346	0	162096	0.27	0.41	0.16	0.17	0.32	0.8524	0.3773	0.7043	1.8549	5	2	7	1534	1819	861	1145	5359	0.27	0.32	0.17	0.24	0	0.41	0.8591	0.4272	0.6714	1.911	0	1310	2048	664	803	0	4825	0.27	0.46	0.12	0.15	0	0.27	0.8386	0.411	0.6824	1.7797	2	0	2	27	40	33	46	146	0.18	0.27	0.23	0.32	0	0.54	0.8987	0.3599	0.6989	1.9696	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	1123	1255	366	688	809	1097	928	929	687	653	933	1160	855	204	584	658	912	820	791	862	651	713	698	1220	715	499	376	935	589	824	730	882	488	490	624	542	415	331	398	555	539	254	1065	549	512	920	484	787	510	744	340	316	459	664	592	700	157	297	353	232	885	209	444	275
GCF_009730915.1	NC_052496	NC_052496.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 26; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	447662	457806	249886	255238	6000	1416592	0.32	0.32	0.18	0.18	0	0.36	0.943	0.0218	0.9784	1.9389	100	96	196	213054	261120	140442	154950	0	769566	0.27	0.33	0.19	0.21	0.4	0.911	0.1721	0.8468	1.9529	177	92	88	180	72866	71228	57985	67249	0	269328	0.28	0.27	0.2	0.25	0.45	0.8709	0.3123	0.7499	1.95	0	93640	130511	52191	55340	0	331682	0.27	0.41	0.16	0.16	0.32	0.8512	0.363	0.7134	1.857	5	2	7	1547	1635	1022	1131	5335	0.29	0.28	0.21	0.22	0	0.43	0.8731	0.2391	0.8002	1.9541	0	2594	3527	1468	1702	0	9291	0.27	0.38	0.16	0.19	0	0.35	0.8708	0.3093	0.7476	1.8959	0	2	2	31	37	35	43	146	0.21	0.25	0.24	0.29	0	0.53	0.8987	0.1895	0.8293	1.9856	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	2377	2803	738	1302	1608	2778	2061	1903	1410	1553	1811	2561	1627	498	1125	1394	1798	1774	1933	1908	1455	1493	1715	2749	1595	1053	795	2050	1326	1744	1606	1886	1137	1109	1356	1362	915	784	1039	1316	1123	618	2132	1217	1196	1950	1128	1699	1019	1462	630	742	919	1457	1361	1427	300	663	680	547	1788	424	949	573
GCF_009730915.1	NC_052497	NC_052497.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 27; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	40637	38667	21539	19525	1000	121368	0.33	0.32	0.18	0.16	0.01	0.34	0.9322	0.0739	0.929	1.921	6	8	14	9352	11453	6287	6917	0	34009	0.28	0.32	0.19	0.21	0.4	0.9016	0.1581	0.8578	1.9545	0	4	6	10	3483	3515	2458	2832	0	12288	0.3	0.28	0.18	0.24	0.43	0.8638	0.2881	0.7715	1.9449	0	1876	2752	1026	1133	0	6787	0.28	0.41	0.14	0.17	0.31	0.8412	0.3495	0.7222	1.8381	0	1	1	191	189	118	141	639	0.3	0.28	0.19	0.23	0	0.42	0.8716	0.427	0.6695	1.9198	0	340	552	167	228	0	1287	0.28	0.43	0.14	0.15	0	0.29	0.851	0.3121	0.7429	1.836	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	130	118	31	70	90	101	69	108	55	62	107	111	107	17	77	76	94	90	112	95	56	68	87	123	58	39	40	137	45	84	84	84	47	48	74	54	35	13	44	26	59	11	92	37	34	88	42	86	47	69	29	19	58	55	49	83	19	21	29	20	97	12	48	18
GCF_009730915.1	NC_052498	NC_052498.1	Dioscorea cayenensis subsp. rotundata cultivar TDr96_F1 chromosome 28; TDr96_F1_v2_PseudoChromosome.rev07_lg8_w22 25.fasta; whole genome shotgun sequence.	23395	21970	11428	11030	1000	68823	0.34	0.32	0.17	0.16	0.01	0.33	0.9289	0.0491	0.9521	1.9085	4	5	9	7286	9383	4682	5350	0	26701	0.27	0.32	0.18	0.22	0.41	0.912	0.2378	0.7938	1.9558	0	4	4	8	1780	1773	1448	1776	0	6777	0.28	0.26	0.22	0.24	0.46	0.8745	0.3585	0.7159	1.9472	0	3266	4651	1743	2054	0	11714	0.25	0.41	0.16	0.18	0.34	0.8515	0.4278	0.6732	1.8511	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	62	62	9	33	49	93	46	39	30	38	37	55	47	14	22	37	39	41	41	56	13	37	28	51	41	32	17	64	32	60	52	45	34	24	32	33	22	18	22	29	29	15	42	27	29	49	27	41	36	39	25	31	27	35	29	33	14	18	37	17	41	13	40	19
NA	NC_024170	NC_024170.1	Dioscorea rotundata plastid; complete genome.	48287	49303	29071	28744	1	155406	0.31	0.32	0.19	0.18	0	0.37	0.9361	0.0161	0.9841	1.9522	58	72	130	33053	32439	19379	22961	1	107833	0.28	0.3	0.19	0.23	0.42	0.8951	0.2155	0.8132	1.9483	57	34	45	79	22749	23193	12878	14652	1	73473	0.3	0.32	0.17	0.21	0.38	0.8859	0.2627	0.7847	1.9228	57	2260	2066	952	1169	0	6447	0.35	0.32	0.15	0.18	0.33	0.8956	0.1342	0.7668	1.9091	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	17	21	38	646	725	678	840	2889	0.22	0.25	0.24	0.29	0	0.53	0.8777	0.2377	0.8019	1.9669	4	4	8	2348	1696	2136	2868	9048	0.26	0.2	0.22	0.31	0	0.53	0.91	0.2826	0.7558	1.9785	587	331	502	507	384	326	577	1040	326	434	929	997	434	144	362	259	526	201	541	862	166	533	193	809	219	219	342	550	739	654	426	539	139	689	388	180	127	215	177	190	91	78	961	145	67	479	260	471	215	454	169	110	765	363	157	278	23	100	116	354	682	36	20	332