GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_025698485.1	NC_069070	NC_069070.1	Gossypium arboreum isolate Shixiya-1 chromosome 1; ASM2569848v2; whole genome shotgun sequence.	40093647	40077524	21586020	21649346	1800	123408337	0.32	0.32	0.17	0.18	0.35	0.9314	0.0017	0.9983	1.9344	1839	1769	3608	3180806	3617257	1808800	2029819	0	10636682	0.3	0.33	0.18	0.19	0.38	0.9014	0.1859	0.8381	1.9402	7089	1208	1174	2382	914958	877204	622928	742176	3157266	0.29	0.28	0.19	0.24	0.43	0.8733	0.301	0.757	1.9502	0	1234134	1569570	638982	691436	0	4134122	0.27	0.41	0.15	0.16	0.32	0.8555	0.3504	0.7209	1.8558	596	550	1146	127602	135809	76788	83295	423494	0.3	0.31	0.19	0.2	0	0.39	0.8674	0.3345	0.7344	1.9219	68	305240	331996	147329	181738	966303	0.3	0.38	0.14	0.18	0	0.32	0.8635	0.3372	0.7325	1.8642	16	32	48	716	872	878	1114	3580	0.2	0.24	0.25	0.31	0.56	0.8856	0.2407	0.7937	1.9702	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	27442	31249	10905	16800	19191	25614	23678	25015	13639	17293	26644	34254	21256	5797	15521	18332	21250	16984	20931	25652	14556	18412	13557	32039	15764	11529	11281	28130	16808	20649	16742	24164	10485	15193	16595	13774	9273	7744	11265	11252	13050	3724	32410	10555	12134	25098	13030	19926	13737	17294	8644	5518	16595	16455	15350	16753	4688	5662	6498	6635	24933	6045	10228	7615
GCF_025698485.1	NC_069071	NC_069071.1	Gossypium arboreum isolate Shixiya-1 chromosome 2; ASM2569848v2; whole genome shotgun sequence.	37021158	37026582	20576026	20520893	2400	115147059	0.32	0.32	0.18	0.18	0.36	0.928	0.0014	0.9986	1.9401	1311	1321	2632	2074934	2355133	1185213	1332192	0	6947472	0.3	0.33	0.19	0.19	0.38	0.9	0.1941	0.8322	1.9408	1745	788	813	1601	588803	562066	402461	479059	2032389	0.29	0.28	0.19	0.24	0.43	0.8733	0.2999	0.7577	1.9509	0	732757	958077	383669	418267	0	2492770	0.28	0.41	0.15	0.16	0.32	0.8547	0.353	0.7191	1.8556	495	482	977	94756	100837	57338	61950	314881	0.3	0.31	0.19	0.2	0	0.39	0.8693	0.3277	0.7404	1.9234	0	262585	277171	129541	155068	824365	0.3	0.37	0.14	0.18	0	0.32	0.8649	0.3395	0.733	1.8674	16	17	33	509	602	608	784	2503	0.2	0.24	0.24	0.31	0.56	0.8892	0.2277	0.8003	1.9754	0	3	3	132	120	100	116	468	0.28	0.26	0.21	0.25	0	0.46	0.8682	0.1223	0.8872	1.9904	17283	20293	7063	10648	12180	16219	15505	15921	8730	11433	16889	21998	13548	3913	9882	12091	13824	10769	13394	16088	9105	12073	8698	19920	10234	7681	7054	17513	10941	13337	10505	15227	6932	9599	10503	8566	6100	5108	7180	7304	8747	2421	20996	6796	7814	16573	8366	12890	9100	11349	5610	3466	10495	10711	9908	10690	3108	3733	4433	4295	15968	4133	7371	5090
GCF_025698485.1	NC_069072	NC_069072.1	Gossypium arboreum isolate Shixiya-1 chromosome 3; ASM2569848v2; whole genome shotgun sequence.	44973441	45026480	24550467	24692020	1200	139243608	0.32	0.32	0.18	0.18	0.35	0.9318	0.0035	0.9965	1.9373	1802	1784	3586	3063882	3473972	1752704	1978194	0	10268752	0.3	0.33	0.18	0.19	0.38	0.9017	0.1922	0.8338	1.9407	1710	1145	1192	2337	889291	853854	612240	727526	3082911	0.29	0.28	0.19	0.24	0.43	0.8749	0.3003	0.7576	1.9513	0	1148159	1459238	597667	645565	0	3850629	0.28	0.41	0.15	0.17	0.32	0.8562	0.3477	0.7226	1.8596	627	573	1200	126525	136931	75802	83506	422764	0.3	0.31	0.19	0.2	0	0.39	0.868	0.3376	0.7317	1.9222	84	395522	428712	189726	241789	1255749	0.3	0.38	0.14	0.18	0	0.32	0.8636	0.3482	0.7265	1.864	19	10	29	425	551	503	667	2146	0.2	0.25	0.23	0.31	0.55	0.8842	0.2927	0.7561	1.9656	0	1	1	1010	843	678	848	3379	0.3	0.25	0.2	0.25	0	0.45	0.9205	0.2015	0.8171	1.986	26447	30651	10652	16422	18431	24629	23111	24183	13159	16808	26188	33136	20378	6045	15300	17502	20537	16544	20102	24966	14099	18442	13287	31112	15537	11392	10719	26749	16781	20153	16075	23267	10256	14553	15875	13315	9658	7891	11414	11001	12930	3841	31768	10758	12468	24224	12926	19297	14226	17352	8566	5559	15389	16563	14855	16483	4503	5715	6717	6537	23332	5858	10381	7671
GCF_025698485.1	NC_069073	NC_069073.1	Gossypium arboreum isolate Shixiya-1 chromosome 4; ASM2569848v2; whole genome shotgun sequence.	39492261	39583064	21701831	21726572	2000	122505728	0.32	0.32	0.18	0.18	0.35	0.929	0.0017	0.9983	1.938	1589	1568	3157	2652392	3015001	1507089	1697514	0	8871996	0.29	0.33	0.19	0.19	0.38	0.901	0.1901	0.835	1.9414	4345	994	945	1939	714254	684913	492009	586521	2477697	0.29	0.28	0.19	0.24	0.43	0.8734	0.3009	0.7573	1.9509	0	1009871	1284442	520886	567097	0	3382296	0.28	0.41	0.15	0.16	0.32	0.8561	0.3507	0.7206	1.857	557	575	1132	123646	135311	73476	82289	414722	0.3	0.31	0.19	0.2	0	0.39	0.8699	0.3353	0.7343	1.9233	0	351831	376375	173164	203212	1104582	0.3	0.38	0.14	0.18	0	0.32	0.8638	0.333	0.7356	1.8677	29	34	63	913	1141	1152	1460	4666	0.19	0.24	0.25	0.31	0.56	0.8871	0.2438	0.7926	1.9692	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21306	24808	8497	13062	15518	19983	18939	19588	10831	13945	20326	26626	16273	4655	12070	13860	16888	13573	16251	19859	11375	14356	10581	24428	12969	9070	8702	21615	13408	16243	12882	18321	8309	11956	12976	10551	7568	6532	8881	9162	10279	3128	25023	8530	9524	19917	10404	15917	10586	13570	6714	4239	12384	13627	12375	13146	3817	4489	5080	5160	18820	4995	8926	5952
GCF_025698485.1	NC_069074	NC_069074.1	Gossypium arboreum isolate Shixiya-1 chromosome 5; ASM2569848v2; whole genome shotgun sequence.	30571888	30578596	16092290	15913288	1700	93157762	0.33	0.33	0.17	0.17	0.34	0.9375	0.0057	0.9943	1.9282	2261	2375	4636	4342987	4979083	2523553	2831470	0	14677093	0.29	0.33	0.18	0.2	0.38	0.906	0.1758	0.8462	1.942	13579	1707	1819	3526	1366460	1310157	947769	1112605	4736991	0.29	0.28	0.19	0.24	0.43	0.8737	0.2967	0.7602	1.9521	6	1571889	2082506	829756	896545	0	5380696	0.27	0.41	0.15	0.16	0.32	0.8564	0.3452	0.7242	1.8594	481	484	965	147618	154544	81608	97902	481672	0.31	0.31	0.17	0.21	0	0.38	0.8622	0.3706	0.7121	1.9102	116	374793	402652	166849	223341	1167635	0.31	0.37	0.14	0.18	0	0.32	0.8644	0.3457	0.7289	1.8649	50	44	94	1379	1663	1749	2252	7043	0.2	0.24	0.25	0.32	0.57	0.8844	0.2634	0.7762	1.965	4	1	5	1844	1559	1674	2017	7094	0.27	0.24	0.22	0.26	0	0.49	0.8922	0.1364	0.8738	1.9913	40426	46120	15584	25118	29186	37874	35265	37648	21353	26414	39952	50825	32358	8791	23093	27919	33150	25248	31013	37736	22781	26587	20975	46455	24999	17480	16596	41722	24793	32096	25191	36601	15741	22056	24514	20505	14307	12435	17111	17224	20507	5749	47860	16684	19065	36774	19754	30116	20629	25702	12418	7936	23681	25441	23280	25734	6903	8131	9262	9766	36733	9374	16469	10982
GCF_025698485.1	NC_069075	NC_069075.1	Gossypium arboreum isolate Shixiya-1 chromosome 6; ASM2569848v2; whole genome shotgun sequence.	46316017	46372654	25387120	25289217	2600	143367608	0.32	0.32	0.18	0.18	0.35	0.9291	0.0025	0.9975	1.9371	1838	1750	3588	3003096	3399322	1703425	1911258	100	10017201	0.29	0.33	0.19	0.19	0.38	0.9006	0.1901	0.8352	1.9412	4749	1138	1041	2179	803079	771021	552088	653285	2779473	0.29	0.28	0.19	0.24	0.43	0.8735	0.2986	0.7583	1.9519	0	1163409	1463307	601316	649523	0	3877555	0.28	0.41	0.15	0.16	0.32	0.8554	0.3493	0.722	1.8554	642	676	1318	119679	128663	72658	79364	400364	0.3	0.31	0.19	0.2	0	0.39	0.8683	0.3292	0.7381	1.9248	2	281157	308022	131923	175568	896670	0.3	0.38	0.14	0.18	0	0.32	0.8621	0.3506	0.7234	1.8668	32	14	46	624	789	875	1096	3384	0.18	0.23	0.26	0.32	0.58	0.888	0.257	0.7809	1.9599	1	0	1	27	31	27	34	119	0.23	0.26	0.23	0.29	0	0.51	0.9308	0.1837	0.8325	1.993	23989	27182	9524	14475	16758	21880	20589	21896	12250	15609	22947	29665	18231	5364	13753	15981	18856	14838	18207	22224	12354	16231	11998	27603	13833	10561	9854	24319	15051	18441	14520	20739	9347	13257	14561	11869	8407	6957	10084	10044	11489	3370	28404	9340	10945	22128	11420	17691	12719	15489	7817	4707	14588	14866	13192	14768	4275	5085	6234	6064	22094	5714	9825	7163
GCF_025698485.1	NC_069076	NC_069076.1	Gossypium arboreum isolate Shixiya-1 chromosome 7; ASM2569848v2; whole genome shotgun sequence.	34515894	34504788	18511881	18500571	1000	106034134	0.33	0.33	0.17	0.17	0.35	0.9293	0.0005	0.9995	1.9332	1822	1759	3581	3167748	3596885	1809145	2021765	0	10595543	0.29	0.33	0.18	0.19	0.38	0.9021	0.184	0.8395	1.9406	4405	1205	1179	2384	874174	828109	599837	712920	3015040	0.29	0.28	0.19	0.24	0.43	0.8725	0.3037	0.7556	1.9502	0	1159091	1495465	599587	650591	0	3904734	0.27	0.41	0.15	0.16	0.32	0.8557	0.3507	0.7209	1.8576	584	537	1121	134022	145443	81464	87694	448623	0.3	0.31	0.19	0.2	0	0.39	0.8682	0.3344	0.7348	1.922	0	400181	428085	201698	234087	1264051	0.3	0.38	0.14	0.18	0	0.32	0.8621	0.3454	0.727	1.8635	18	26	44	624	811	820	1044	3299	0.19	0.25	0.25	0.32	0.57	0.8846	0.2813	0.7607	1.9658	0	6	6	974	854	992	1268	4088	0.25	0.24	0.23	0.28	0	0.51	0.8834	0.1336	0.8781	1.9925	26023	30121	10198	16000	18913	24662	23056	23444	13275	16650	25064	33055	20139	5507	14878	17378	20481	16007	19929	23517	13434	17523	12893	30204	15461	11532	10244	25562	15904	20046	15765	22398	10180	13997	15444	13131	9114	7939	10947	11058	12506	3597	31153	10449	11831	24335	12403	19346	12982	16668	8228	5090	14816	16093	15216	16194	4602	5289	6270	6439	23323	5971	10609	7320
GCF_025698485.1	NC_069077	NC_069077.1	Gossypium arboreum isolate Shixiya-1 chromosome 8; ASM2569848v2; whole genome shotgun sequence.	46009033	46025744	25120057	25145724	1700	142302258	0.32	0.32	0.18	0.18	0.35	0.9332	0.0007	0.9993	1.9369	2042	1996	4038	3382592	3889995	1951787	2190791	100	11415265	0.29	0.33	0.19	0.19	0.38	0.9021	0.185	0.8388	1.9421	21829	1333	1324	2657	967424	924017	676276	797905	3365622	0.29	0.28	0.19	0.24	0.43	0.8732	0.3028	0.7563	1.9508	0	1337426	1734939	701159	760571	100	4534195	0.27	0.41	0.15	0.17	0.32	0.856	0.3514	0.7201	1.8578	658	643	1301	121006	130093	74804	79724	405627	0.3	0.31	0.19	0.19	0	0.39	0.8702	0.3206	0.744	1.9255	46	260537	285307	120335	160840	827019	0.3	0.37	0.14	0.18	0	0.32	0.8646	0.3302	0.7378	1.8701	21	12	33	489	585	616	772	2462	0.2	0.24	0.25	0.31	0.56	0.8877	0.2382	0.7957	1.9692	11	0	11	2884	2504	2571	3191	11150	0.26	0.23	0.25	0.27	0	0.51	0.89	0.103	0.9044	1.996	28642	33202	11567	17511	20908	26712	25614	25873	15048	19247	27265	35136	21935	6689	16083	19634	22454	18121	21964	26287	15721	19303	14860	33204	17702	12866	11610	28722	17340	22043	17860	24930	11464	15940	17335	14681	10466	8834	12269	12626	14129	4379	33621	11628	13639	26310	13916	21693	14950	18587	9448	6052	16862	18074	17018	18120	5371	6254	7514	7236	25584	7003	12600	8543
GCF_025698485.1	NC_069078	NC_069078.1	Gossypium arboreum isolate Shixiya-1 chromosome 9; ASM2569848v2; whole genome shotgun sequence.	29206434	29211935	15502454	15476803	1500	89399126	0.33	0.33	0.17	0.17	0.35	0.9309	0.0009	0.9991	1.9309	1670	1728	3398	3337081	3779533	1882193	2107284	200	11106291	0.29	0.33	0.18	0.2	0.38	0.9033	0.1828	0.8404	1.9394	4081	1212	1231	2443	927927	883627	636367	758074	3205995	0.29	0.28	0.19	0.24	0.43	0.8726	0.2989	0.7585	1.9515	4	1294666	1658349	671460	721455	200	4346130	0.27	0.41	0.15	0.16	0.32	0.8552	0.3477	0.723	1.8558	397	435	832	108063	115174	63081	72307	358625	0.31	0.31	0.18	0.2	0	0.39	0.8653	0.3553	0.7212	1.916	0	372636	396615	175342	214923	1159516	0.3	0.38	0.14	0.18	0	0.32	0.8634	0.3585	0.7208	1.8611	40	26	66	980	1171	1226	1591	4968	0.2	0.24	0.25	0.32	0.57	0.8864	0.2559	0.7817	1.9666	5	25	30	1673	1506	1772	2053	7004	0.23	0.22	0.27	0.28	0	0.55	0.8983	0.066	0.9374	1.9894	27539	31904	10772	16843	19857	25502	24266	25533	14093	17788	26958	34290	21855	6127	15665	18575	21650	17037	20809	25312	14418	18664	13736	31502	16446	11901	10819	27772	16866	21122	16836	23742	10807	15106	16795	13675	9589	8139	11344	11594	13927	3959	32673	11072	12815	25598	13399	20725	14351	17664	8864	5737	16128	16607	15704	17065	5010	6046	6912	6672	24831	6499	11593	8081
GCF_025698485.1	NC_069079	NC_069079.1	Gossypium arboreum isolate Shixiya-1 chromosome 10; ASM2569848v2; whole genome shotgun sequence.	42835374	42848918	23006969	23068466	1400	131761127	0.33	0.33	0.17	0.18	0.35	0.9342	0.0015	0.9985	1.9338	2037	1960	3997	3453834	3922809	1944213	2204035	100	11524991	0.3	0.33	0.18	0.2	0.38	0.9018	0.1873	0.8374	1.9408	7058	1348	1227	2575	1002935	958465	675850	806467	3443717	0.29	0.28	0.19	0.24	0.43	0.8736	0.2987	0.7585	1.9508	0	1304084	1672102	670415	729896	100	4376597	0.28	0.41	0.15	0.16	0.32	0.8553	0.3469	0.7232	1.8558	635	672	1307	151693	161910	90765	102459	506827	0.3	0.31	0.19	0.2	0	0.39	0.868	0.3352	0.7342	1.9229	119	355232	387837	163518	208188	1114775	0.3	0.38	0.14	0.18	0	0.32	0.8635	0.3461	0.7261	1.8658	35	41	76	1121	1388	1362	1737	5608	0.2	0.25	0.24	0.31	0.55	0.8924	0.2422	0.7913	1.9737	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	29581	33829	11713	18009	21059	27411	25078	27936	14804	19190	29419	37089	22508	6501	16579	20293	22870	18008	22968	27867	15683	19821	14785	33528	17204	12544	12235	30918	18372	22808	18323	26220	11745	17090	18156	14566	10105	8338	12426	12257	14540	4003	35888	11262	13689	26840	14311	22347	15809	19212	9187	5721	18617	17752	16723	18062	5452	6044	6905	7100	26915	7310	12496	8466
GCF_025698485.1	NC_069080	NC_069080.1	Gossypium arboreum isolate Shixiya-1 chromosome 11; ASM2569848v2; whole genome shotgun sequence.	44872667	44874386	24014555	24088992	1900	137852500	0.33	0.33	0.17	0.17	0.35	0.9357	0.0016	0.9984	1.9331	2437	2588	5025	4617360	5217262	2659565	2967233	100	15461520	0.29	0.33	0.18	0.2	0.38	0.9033	0.1826	0.8407	1.9422	29006	1676	1797	3473	1359188	1297736	923531	1096418	4676873	0.29	0.28	0.19	0.24	0.43	0.8736	0.3017	0.757	1.9505	1	1643110	2117445	874184	934142	100	5568981	0.27	0.41	0.15	0.16	0.32	0.8559	0.3506	0.7206	1.858	686	730	1416	170260	181088	100754	114165	566267	0.3	0.31	0.18	0.2	0	0.39	0.8659	0.342	0.7299	1.9198	91	471949	509117	222939	276787	1480792	0.3	0.38	0.14	0.18	0	0.32	0.8612	0.3409	0.7308	1.8602	43	27	70	1013	1226	1303	1615	5157	0.2	0.24	0.25	0.32	0.57	0.884	0.2552	0.7851	1.9631	0	5	5	1037	903	900	1095	3935	0.27	0.25	0.23	0.25	0	0.49	0.8829	0.0883	0.9174	1.9964	39597	46295	15840	24492	28412	38180	34522	37357	20623	26250	39634	50955	31298	8572	23162	26879	31765	23871	30117	37985	21787	25994	20458	47160	23853	17084	16381	41895	24408	30445	24401	36848	15465	22297	24012	20098	13837	11514	16314	16883	19912	5756	48988	15587	18683	36108	19045	30347	21220	25950	12519	8027	24400	24342	22743	25115	7238	8147	9248	9594	36452	9512	16862	11657
GCF_025698485.1	NC_069081	NC_069081.1	Gossypium arboreum isolate Shixiya-1 chromosome 12; ASM2569848v2; whole genome shotgun sequence.	39006092	38967893	21021469	20982439	1200	119979093	0.33	0.32	0.18	0.17	0.35	0.9296	0.0014	0.9986	1.9341	1908	2039	3947	3361138	3823773	1960670	2195671	0	11341252	0.29	0.33	0.18	0.2	0.38	0.9041	0.18	0.8428	1.9442	1758	1309	1440	2749	1020296	974286	711661	845637	3551880	0.29	0.28	0.19	0.24	0.43	0.874	0.3047	0.7548	1.9511	0	1321269	1691749	701791	753532	0	4468341	0.27	0.41	0.16	0.17	0.32	0.856	0.3494	0.7218	1.8601	550	564	1114	122640	130231	73670	80326	406867	0.31	0.31	0.19	0.2	0	0.39	0.8684	0.328	0.7394	1.9229	0	253254	273121	112350	150306	789031	0.3	0.37	0.14	0.18	0	0.32	0.8653	0.3432	0.73	1.8698	27	18	45	647	835	824	1063	3369	0.19	0.25	0.25	0.32	0.56	0.8711	0.2979	0.7533	1.9571	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	30864	34977	12368	18505	22219	29309	27426	27112	15894	19523	28707	37737	23288	6859	17490	20465	23930	19324	22886	28027	17029	20915	15542	35284	19194	13393	12082	30765	18586	23442	18363	26229	12059	16688	18486	15676	11089	9231	12802	13232	15122	4568	35244	12427	13941	27731	15070	22711	15364	19779	9609	6347	17455	19209	17580	18790	5375	6653	7518	7758	27171	7062	12129	8745
GCF_025698485.1	NC_069082	NC_069082.1	Gossypium arboreum isolate Shixiya-1 chromosome 13; ASM2569848v2; whole genome shotgun sequence.	41922516	41935854	22898760	22833214	2100	129592444	0.32	0.32	0.18	0.18	0.35	0.9287	0.0016	0.9984	1.9366	1894	1947	3841	3098718	3542577	1758846	1996698	0	10396839	0.29	0.33	0.18	0.19	0.38	0.9004	0.1935	0.8325	1.9398	6434	1162	1247	2409	857428	824253	593824	704161	2979666	0.29	0.28	0.19	0.24	0.43	0.8724	0.3069	0.7532	1.9498	0	1213036	1550220	628386	689125	0	4080767	0.27	0.41	0.15	0.17	0.32	0.8564	0.3502	0.721	1.8581	665	666	1331	142171	152493	83874	94631	473169	0.3	0.31	0.19	0.2	0	0.38	0.8678	0.3311	0.7373	1.9215	0	362768	394979	168937	217898	1144582	0.3	0.38	0.14	0.18	0	0.32	0.8647	0.3417	0.7306	1.8643	50	26	76	1092	1405	1337	1711	5545	0.2	0.25	0.24	0.31	0.55	0.8893	0.2904	0.7592	1.9668	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	25681	29330	10088	15820	18452	24109	22938	23344	13006	16531	24405	32071	19714	5736	14447	16629	20293	15672	19649	24087	13352	17554	12700	30327	15198	11110	10031	25718	15983	19753	15619	21916	10159	13788	15216	12652	9030	7627	10898	10954	12365	3602	30112	10295	11633	24142	12290	18944	13267	16652	8214	5045	14712	16408	14522	16776	4338	5404	6392	6319	22838	5934	10668	7536
NA	NC_035073	NC_035073.1	Gossypium arboreum mitochondrion; complete genome.	189897	188600	154473	154512	0	687482	0.28	0.27	0.22	0.22	0.45	0.9517	0.0036	0.9965	1.9926	34	40	74	18641	18549	16142	18001	0	71333	0.25	0.28	0.22	0.25	0.47	0.9039	0.1928	0.8311	1.9762	239	16	16	32	7602	8517	5920	6140	28179	0.27	0.31	0.2	0.22	0.42	0.9036	0.1943	0.8314	1.9643	225	6040	5344	5815	6468	0	23667	0.25	0.22	0.25	0.28	0.52	0.9227	0.1225	0.8865	1.9935	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	11	17	28	487	556	486	594	2123	0.23	0.26	0.23	0.28	0.51	0.8909	0.1903	0.8332	1.9824	5	2	7	3720	3202	3250	4105	14277	0.27	0.22	0.23	0.28	0	0.51	0.9198	0.2025	0.8192	1.9899	210	174	169	140	127	124	202	298	129	152	200	276	137	72	137	120	185	120	276	356	91	186	100	203	66	126	140	198	235	200	193	201	100	210	122	110	69	107	86	111	106	76	269	92	74	178	124	176	99	178	124	77	218	172	100	152	30	83	82	125	187	29	29	148
NA	NC_016712	NC_016712.1	Gossypium arboreum chloroplast; complete genome.	49682	50895	30145	29508	0	160230	0.31	0.32	0.19	0.18	0.37	0.9358	0.0227	0.9775	1.9523	57	71	128	32994	32558	19943	23450	0	108945	0.28	0.29	0.2	0.23	0.43	0.8968	0.213	0.815	1.9517	57	36	45	81	23353	23840	13630	15647	76470	0.3	0.31	0.17	0.21	0.39	0.8889	0.2629	0.7833	1.9303	57	2741	2518	1242	1518	0	8019	0.34	0.31	0.16	0.19	0.35	0.8975	0.1422	0.781	1.9227	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	15	22	37	628	686	680	817	2811	0.22	0.24	0.24	0.29	0.54	0.8812	0.2252	0.8118	1.9675	5	3	8	2333	1695	2150	2872	9050	0.26	0.21	0.23	0.3	0	0.53	0.9099	0.2805	0.7571	1.9788	583	353	493	497	342	358	604	1073	316	449	955	1001	411	142	386	294	563	207	522	928	190	534	180	841	222	262	382	563	742	680	438	547	171	662	374	219	161	191	196	232	126	126	987	188	77	479	324	436	221	454	187	163	794	390	182	294	31	128	157	318	706	58	35	359