GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_025698545.1	NC_068565	NC_068565.1	Gossypium raimondii isolate GPD5lz chromosome 1; ASM2569854v1; whole genome shotgun sequence.	17504330	17532248	8671123	8711142	900	52419743	0.33	0.33	0.17	0.17	0.33	0.9409	0.0031	0.9969	1.9165	1392	1389	2781	2733965	3160726	1565709	1745669	100	9206169	0.29	0.33	0.18	0.2	0.38	0.9042	0.185	0.838	1.9392	27292	1115	1088	2203	830416	803293	566318	674891	2874918	0.29	0.28	0.19	0.24	0.43	0.8733	0.3005	0.7574	1.9503	0	1093385	1411304	563609	612162	100	3680560	0.28	0.41	0.15	0.16	0.32	0.8551	0.3508	0.7207	1.8561	0	235	258	493	93730	106293	58673	61347	320043	0.3	0.32	0.19	0.19	0	0.39	0.8706	0.3487	0.7232	1.9191	0	124441	140839	56398	66883	388561	0.29	0.41	0.14	0.16	0	0.3	0.8545	0.3791	0.7057	1.837	10	25	35	522	609	656	831	2618	0.2	0.23	0.25	0.32	0.57	0.8878	0.245	0.7867	1.9679	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	24534	28306	9951	15288	17335	22957	22034	22990	12435	16227	23794	30795	19659	5243	14193	16481	19878	15121	18963	23531	12932	16639	12416	28533	14205	10387	10258	25436	15603	18954	15147	22109	9633	13827	14961	12352	8471	7011	10257	10364	11812	3336	29277	9414	11333	23098	11617	18329	12917	15909	7981	4935	15079	14708	13843	14921	4625	5244	5919	6038	22380	5950	10256	7167
GCF_025698545.1	NC_068566	NC_068566.1	Gossypium raimondii isolate GPD5lz chromosome 2; ASM2569854v1; whole genome shotgun sequence.	16112636	16104984	8018993	8033087	800	48270500	0.33	0.33	0.17	0.17	0.33	0.9412	0.0011	0.9989	1.9175	1109	1209	2318	2074762	2395333	1208523	1351388	0	7030006	0.29	0.33	0.18	0.2	0.38	0.9034	0.1899	0.8343	1.9419	27782	849	930	1779	660105	627393	451995	542269	2281762	0.29	0.28	0.19	0.24	0.43	0.8733	0.3018	0.7567	1.9502	0	816926	1060985	425329	462887	0	2766127	0.27	0.41	0.15	0.17	0.32	0.8558	0.3529	0.7192	1.8573	0	211	228	439	74650	83917	47789	48171	254527	0.29	0.31	0.2	0.19	0	0.39	0.8693	0.3399	0.7286	1.9245	127	92401	105540	44119	48375	290435	0.29	0.41	0.14	0.16	0	0.3	0.8498	0.3781	0.7077	1.8331	33	23	56	879	1018	1037	1288	4222	0.21	0.24	0.25	0.31	0.55	0.8868	0.2167	0.812	1.9737	1	1	2	1885	1588	1409	1790	6672	0.28	0.24	0.21	0.27	0	0.48	0.9278	0.2048	0.815	1.991	20005	22788	7772	11808	13921	18349	17013	17773	9725	12732	18889	24837	14843	4512	11054	13254	14873	12293	15060	17938	10533	13780	9851	22876	11590	8797	7790	19932	12189	15000	12149	16513	7881	10511	11862	9829	6782	5687	8254	8497	9616	2743	23398	7905	8642	18343	9641	14493	9880	12425	6580	4127	11795	11921	11095	11994	3453	4323	5142	4794	17901	4515	8042	5673
GCF_025698545.1	NC_068567	NC_068567.1	Gossypium raimondii isolate GPD5lz chromosome 3; ASM2569854v1; whole genome shotgun sequence.	21051466	20996576	10483709	10482544	1100	63015395	0.33	0.33	0.17	0.17	0.33	0.9408	0.0014	0.9986	1.9177	1539	1540	3079	3027056	3458032	1744581	1927655	0	10157324	0.29	0.33	0.18	0.2	0.38	0.9048	0.1897	0.8349	1.9416	68905	1223	1194	2417	912263	877437	626644	747632	3163976	0.29	0.28	0.19	0.24	0.43	0.8741	0.3038	0.7556	1.9503	1	1222488	1545377	633596	678274	0	4079735	0.27	0.4	0.15	0.17	0.32	0.8568	0.3487	0.722	1.8607	0	277	307	584	100894	113984	64572	66236	345686	0.29	0.32	0.2	0.19	0	0.39	0.8702	0.3533	0.7194	1.9225	0	114590	136703	54699	61572	367564	0.29	0.4	0.15	0.16	0	0.3	0.8535	0.3676	0.712	1.8397	12	21	33	479	621	596	779	2475	0.19	0.25	0.24	0.32	0.56	0.884	0.285	0.7617	1.9622	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	27097	31175	10851	16841	19058	25218	23454	25047	13618	17695	26520	34121	20804	6110	15707	17787	20933	16836	20645	25733	14556	19081	13545	31797	15969	11556	10935	27778	17353	20862	16531	23857	10612	14813	16265	13580	9899	8123	11697	11416	13202	3914	32583	10963	12724	24770	13207	19991	14612	17922	8674	5782	15814	16830	15235	16588	4753	5754	6856	6700	24189	6220	10956	7896
GCF_025698545.1	NC_068568	NC_068568.1	Gossypium raimondii isolate GPD5lz chromosome 4; ASM2569854v1; whole genome shotgun sequence.	16925388	16893034	8435397	8395172	200	50649191	0.33	0.33	0.17	0.17	0.33	0.9415	0.0033	0.9967	1.9173	1268	1255	2523	2393688	2753418	1381289	1545922	0	8074317	0.29	0.33	0.18	0.2	0.38	0.9045	0.1898	0.8345	1.9411	26519	988	986	1974	725729	696340	500017	597407	2519493	0.29	0.28	0.19	0.24	0.43	0.8737	0.303	0.7558	1.9508	0	1002221	1276138	516488	563652	0	3358499	0.28	0.41	0.15	0.17	0.32	0.8564	0.3503	0.7209	1.859	0	238	224	462	80527	92038	50608	53276	276449	0.3	0.32	0.19	0.19	0	0.39	0.8659	0.3773	0.7054	1.9124	0	89843	109370	41420	50321	290954	0.29	0.4	0.14	0.16	0	0.3	0.8519	0.3767	0.7092	1.8359	23	25	48	702	851	890	1125	3568	0.2	0.24	0.25	0.32	0.57	0.8862	0.231	0.8031	1.9707	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21583	25000	8512	13207	15768	20370	19168	19942	11081	14200	20575	27132	16453	4788	12320	14202	16946	13928	16620	20191	11398	14483	10728	24993	13012	9252	8746	22069	13740	16644	13205	18594	8627	12046	13045	10887	7662	6643	9168	9354	10406	3141	25448	8665	9715	20231	10730	16097	10860	13811	6885	4404	12576	13682	12477	13184	3835	4563	5284	5200	19255	5087	9160	6257
GCF_025698545.1	NC_068569	NC_068569.1	Gossypium raimondii isolate GPD5lz chromosome 5; ASM2569854v1; whole genome shotgun sequence.	19103272	19106022	9454546	9474864	600	57139304	0.33	0.33	0.17	0.17	0.33	0.9446	0.0011	0.9989	1.9162	2157	2270	4427	4712500	5408533	2747767	3029370	100	15898270	0.29	0.33	0.18	0.2	0.38	0.9081	0.169	0.8506	1.9453	60163	1832	1951	3783	1463268	1404816	1019283	1199254	5086621	0.29	0.28	0.2	0.24	0.43	0.8735	0.2954	0.7611	1.9529	12	1748513	2295409	922476	990628	100	5957126	0.27	0.41	0.16	0.16	0.32	0.8565	0.3447	0.7244	1.861	12216	213	242	455	105878	116449	63449	70723	356499	0.3	0.31	0.19	0.2	0	0.39	0.8666	0.3605	0.7169	1.9165	0	182526	202672	84037	95675	564910	0.29	0.4	0.14	0.17	0	0.31	0.8559	0.3772	0.7086	1.8457	44	42	86	1249	1504	1611	2062	6426	0.19	0.23	0.25	0.32	0.57	0.8838	0.267	0.7737	1.9629	10	0	10	1203	1011	1148	1291	4653	0.25	0.23	0.25	0.26	0	0.52	0.8797	0.0851	0.9201	1.9959	43622	49627	16804	26663	31448	40304	37774	40149	23027	28867	42380	53995	34520	9584	24612	29876	35398	26814	33168	40009	24671	28905	22496	49327	26998	18830	17538	44951	26703	34478	26807	38966	16957	23672	26437	21724	15428	13413	18236	18610	22119	6199	50650	17987	20842	39816	21333	32527	22364	27834	13416	8681	25130	27485	25353	27756	7701	8882	10245	10341	39274	10271	18316	12019
GCF_025698545.1	NC_068570	NC_068570.1	Gossypium raimondii isolate GPD5lz chromosome 6; ASM2569854v1; whole genome shotgun sequence.	20200430	20150656	10042899	10008004	700	60402689	0.33	0.33	0.17	0.17	0.33	0.9415	0.003	0.997	1.9169	1416	1437	2853	2790899	3210846	1601356	1767184	200	9370485	0.29	0.33	0.18	0.2	0.38	0.9044	0.1825	0.8401	1.9408	13499	1083	1136	2219	812733	781851	562684	663127	2820395	0.29	0.28	0.19	0.24	0.43	0.8734	0.2967	0.7596	1.9523	0	1114241	1422693	574634	618131	200	3729899	0.27	0.41	0.15	0.16	0.32	0.8556	0.3482	0.7228	1.8574	0	281	250	531	94137	107507	60452	62990	325086	0.29	0.32	0.2	0.19	0	0.39	0.8713	0.3447	0.7249	1.9237	0	129633	149947	57855	64980	402415	0.29	0.4	0.15	0.16	0	0.31	0.8548	0.3631	0.714	1.8419	18	33	51	703	888	968	1215	3774	0.19	0.24	0.26	0.32	0.58	0.8922	0.2567	0.7801	1.9626	0	1	1	47	38	36	36	157	0.3	0.24	0.23	0.23	0	0.46	0.8682	0.1059	0.9043	1.9907	24444	27406	9527	14636	16983	22195	20925	22071	12632	16133	23059	29952	18624	5433	13841	16207	19194	14966	18623	22365	12542	16361	12226	27785	14256	10875	9953	24584	15121	18444	14932	21140	9573	13251	14696	12056	8633	7109	10292	10189	11802	3431	28526	9451	11339	22320	11547	18109	13010	15743	7953	4853	14663	15131	13398	14843	4365	5236	6382	6143	22409	5826	10194	7271
GCF_025698545.1	NC_068571	NC_068571.1	Gossypium raimondii isolate GPD5lz chromosome 7; ASM2569854v1; whole genome shotgun sequence.	17901836	17884693	8852921	8860601	500	53500551	0.33	0.33	0.17	0.17	0.33	0.9406	0.0009	0.9991	1.916	1474	1500	2974	2769336	3206266	1615108	1801083	0	9391793	0.29	0.33	0.18	0.2	0.38	0.9053	0.1832	0.8392	1.9419	1491	1220	1203	2423	881319	834447	606247	719575	3041588	0.29	0.28	0.19	0.24	0.43	0.8724	0.3038	0.7554	1.9502	0	1080634	1410364	557937	610515	0	3659450	0.27	0.41	0.15	0.16	0.32	0.8555	0.3535	0.7189	1.8578	0	203	252	455	90634	101635	58264	61159	311692	0.29	0.31	0.19	0.2	0	0.39	0.8696	0.3508	0.7215	1.9228	0	153197	177391	73182	84109	487879	0.29	0.4	0.15	0.16	0	0.31	0.8577	0.3753	0.708	1.8458	19	28	47	668	858	878	1095	3499	0.19	0.24	0.25	0.31	0.57	0.8819	0.2838	0.7598	1.9641	1	0	1	28	26	33	32	119	0.24	0.22	0.28	0.27	0	0.55	0.8987	0.0524	0.9491	1.9933	26402	30484	10321	15980	19085	24778	23230	23373	13324	16869	25242	33173	20224	5604	14902	17672	20591	16188	20164	23653	13451	17639	13196	30547	15686	11578	10381	25748	16215	20206	16050	22421	10350	14168	15662	13286	9405	8088	11005	11145	12624	3762	31165	10413	11891	24530	12720	19479	13032	16849	8313	5183	15015	16155	15200	16357	4635	5409	6429	6387	23499	5957	10701	7457
GCF_025698545.1	NC_068572	NC_068572.1	Gossypium raimondii isolate GPD5lz chromosome 8; ASM2569854v1; whole genome shotgun sequence.	20925799	20928283	10374936	10377820	500	62607338	0.33	0.33	0.17	0.17	0.33	0.9418	0.0002	0.9998	1.9164	1634	1677	3311	3143833	3664345	1840749	2043943	100	10692970	0.29	0.33	0.18	0.2	0.38	0.9053	0.1822	0.84	1.9417	22037	1297	1333	2630	958467	918745	675425	793668	3346305	0.29	0.28	0.2	0.24	0.43	0.8733	0.3007	0.7575	1.9521	0	1275980	1666477	666368	724973	0	4333798	0.27	0.41	0.15	0.17	0.32	0.8565	0.352	0.7197	1.8598	0	281	287	568	99386	112424	63090	65560	340460	0.29	0.32	0.2	0.19	0	0.39	0.869	0.3516	0.7203	1.9194	113	150803	174466	68678	77419	471366	0.29	0.4	0.15	0.16	0	0.31	0.8565	0.3699	0.7121	1.8407	15	23	38	569	646	719	891	2825	0.2	0.23	0.25	0.32	0.57	0.8887	0.2214	0.8081	1.9677	1	0	1	27	29	29	34	119	0.23	0.24	0.24	0.29	0	0.53	0.9258	0.1151	0.892	1.9947	28729	33045	11564	17448	20679	26435	25630	25684	15091	18864	26801	34654	21817	6635	15962	19586	22322	18274	21929	25972	15643	19093	15017	32895	17726	12891	11445	28579	17231	21663	17928	24874	11577	15606	17114	14782	10564	8946	12366	12599	14040	4384	33210	11589	13749	26183	14025	21470	14806	18509	9515	6063	16602	17982	16727	17825	5281	6359	7564	7184	25177	6869	12413	8587
GCF_025698545.1	NC_068573	NC_068573.1	Gossypium raimondii isolate GPD5lz chromosome 9; ASM2569854v1; whole genome shotgun sequence.	16731758	16687917	8274881	8234569	500	49929625	0.34	0.33	0.17	0.16	0.33	0.9397	0.0038	0.9963	1.9156	1516	1706	3222	2998156	3457522	1739672	1940586	200	10136136	0.29	0.32	0.18	0.2	0.39	0.9057	0.1741	0.8467	1.9442	10785	1229	1253	2482	935451	890387	642582	765013	3233433	0.29	0.28	0.19	0.24	0.43	0.873	0.2993	0.7584	1.9516	0	1255015	1621688	649831	703699	100	4230333	0.27	0.41	0.15	0.16	0.32	0.856	0.3466	0.7235	1.8584	0	211	191	402	79578	88945	48142	53413	270078	0.3	0.31	0.19	0.2	0	0.39	0.8672	0.3596	0.7167	1.9171	0	109994	124464	49651	59162	343271	0.29	0.4	0.14	0.16	0	0.3	0.8525	0.3892	0.7017	1.8338	35	33	68	1003	1198	1275	1649	5125	0.19	0.23	0.25	0.32	0.57	0.8806	0.2686	0.7732	1.9625	1	200	201	5494	5423	6242	6736	23895	0.23	0.23	0.26	0.28	0	0.54	0.9057	0.0877	0.9177	1.9917	27846	31994	10740	16931	20091	25736	24484	25738	14272	17865	26985	34721	22024	6149	15842	18551	21574	17125	20936	25434	14396	18919	13893	31975	16433	12175	10940	27844	17003	21297	17050	24090	10841	15083	17002	13865	9642	8213	11486	11830	14105	4110	32905	11148	13044	25928	13571	20943	14512	17718	8898	5754	16237	16713	15742	17180	5130	6026	7079	6723	25156	6535	11872	8267
GCF_025698545.1	NC_068574	NC_068574.1	Gossypium raimondii isolate GPD5lz chromosome 10; ASM2569854v1; whole genome shotgun sequence.	20727301	20719872	10267046	10221282	400	61935901	0.33	0.33	0.17	0.17	0.33	0.9423	0.0024	0.9976	1.9157	1715	1652	3367	3331433	3824169	1907407	2122301	0	11185310	0.29	0.33	0.18	0.2	0.38	0.905	0.1823	0.8403	1.9417	59714	1326	1285	2611	999434	959235	681101	810453	3450223	0.29	0.28	0.19	0.24	0.43	0.8738	0.2969	0.7598	1.9511	0	1276883	1647867	659447	715422	0	4299619	0.27	0.41	0.15	0.16	0.32	0.8557	0.3498	0.7213	1.8571	0	311	306	617	116384	131785	71394	77441	397004	0.29	0.32	0.19	0.2	0	0.39	0.8676	0.3481	0.7238	1.9201	107	159881	184552	78696	86597	509726	0.28	0.41	0.14	0.16	0	0.3	0.8498	0.3925	0.6965	1.8343	43	33	76	1090	1367	1397	1763	5617	0.19	0.24	0.25	0.31	0.56	0.8924	0.2448	0.7886	1.9716	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	29777	33577	11500	18184	21257	27357	25464	27738	14975	19197	29253	36951	22634	6531	16514	20321	22903	18330	22829	27918	15707	20035	15089	33899	17336	12790	12182	31034	18307	22822	18502	26262	11679	16822	18135	14882	10159	8451	12629	12414	14662	4001	35334	11541	13791	27291	14482	22236	15557	19137	9265	5840	18386	17861	16684	18091	5376	6232	7150	7069	26809	6977	11985	8479
GCF_025698545.1	NC_068575	NC_068575.1	Gossypium raimondii isolate GPD5lz chromosome 11; ASM2569854v1; whole genome shotgun sequence.	21134115	21129980	10448293	10475112	700	63188200	0.33	0.33	0.17	0.17	0.33	0.94	0.0014	0.9986	1.9161	2009	2034	4043	4081037	4683114	2374178	2624901	0	13763230	0.29	0.33	0.18	0.2	0.38	0.9065	0.1761	0.8448	1.9434	25757	1650	1652	3302	1282506	1225799	883223	1045163	4436691	0.29	0.28	0.19	0.24	0.43	0.8734	0.3035	0.7556	1.9507	0	1499117	1965823	786810	848982	0	5100732	0.27	0.41	0.15	0.16	0.32	0.8561	0.3518	0.7198	1.8594	0	288	303	591	128936	140714	80863	83657	434170	0.3	0.31	0.19	0.2	0	0.39	0.869	0.3514	0.7218	1.9203	94	185884	205299	85790	96183	573156	0.29	0.4	0.15	0.16	0	0.31	0.8548	0.3713	0.7112	1.8444	23	36	59	854	1035	1100	1378	4367	0.2	0.24	0.25	0.32	0.57	0.8832	0.2614	0.7786	1.9636	0	1	1	956	796	714	871	3337	0.29	0.24	0.21	0.26	0	0.47	0.9292	0.1904	0.8262	1.9917	37746	44064	14922	23180	27235	36116	33206	34960	19915	25005	36623	47809	29502	8219	21742	25647	29960	23018	28771	35429	20626	24768	19769	44567	23049	16445	15383	39721	22791	28814	23445	34210	15074	20774	22803	19190	13480	11123	15739	16352	18889	5609	45577	15231	17665	34568	18276	28595	19677	24400	12036	7845	22770	23348	21566	23711	6851	8050	9028	9095	34468	8996	15999	11091
GCF_025698545.1	NC_068576	NC_068576.1	Gossypium raimondii isolate GPD5lz chromosome 12; ASM2569854v1; whole genome shotgun sequence.	19262055	19250438	9592731	9611055	300	57716579	0.33	0.33	0.17	0.17	0.33	0.9421	0.0013	0.9987	1.9177	1650	1707	3357	3111415	3602958	1844855	2060196	100	10619524	0.29	0.33	0.18	0.2	0.38	0.9069	0.1783	0.8435	1.9453	6728	1323	1418	2741	1022061	980861	718092	854009	3575023	0.29	0.28	0.19	0.24	0.43	0.8742	0.3033	0.7556	1.9516	0	1250415	1629671	661541	712515	100	4254242	0.27	0.41	0.16	0.17	0.32	0.8561	0.3511	0.7203	1.8608	0	257	240	497	93397	103404	57363	61682	315846	0.3	0.31	0.19	0.2	0	0.39	0.8649	0.3633	0.7149	1.9142	0	128679	149697	56396	70102	404874	0.29	0.4	0.14	0.16	0	0.31	0.853	0.3763	0.7103	1.8409	30	21	51	704	921	939	1205	3769	0.18	0.24	0.25	0.32	0.57	0.8727	0.3078	0.7447	1.9555	10	2	12	3695	3233	3358	4161	14447	0.26	0.23	0.24	0.27	0	0.51	0.8974	0.1223	0.8869	1.9955	31033	34793	12198	18498	22407	29354	27694	27026	16105	19821	28581	37889	23362	6934	17518	20472	24234	19502	23043	28147	17316	21283	15678	35538	19271	13520	12108	30872	18668	23771	18550	26444	12045	16448	18444	15829	11002	9344	12916	13440	15231	4729	35258	12577	14190	28135	15311	22813	15748	19843	9878	6508	17385	19445	17707	18963	5385	6839	7737	7763	27071	7117	12444	8890
GCF_025698545.1	NC_068577	NC_068577.1	Gossypium raimondii isolate GPD5lz chromosome 13; ASM2569854v1; whole genome shotgun sequence.	19613118	19616121	9757482	9763475	700	58750896	0.33	0.33	0.17	0.17	0.33	0.9416	0.0004	0.9996	1.9172	1522	1630	3152	2981203	3442710	1720725	1917014	0	10061652	0.29	0.33	0.18	0.2	0.38	0.9042	0.1909	0.8335	1.9411	3104	1238	1272	2510	877320	842162	608366	724623	3052471	0.29	0.28	0.19	0.24	0.43	0.8725	0.3074	0.7529	1.95	0	1246342	1589372	641733	699161	0	4176608	0.27	0.41	0.15	0.17	0.32	0.8569	0.3493	0.7217	1.8599	0	229	286	515	95058	108802	60524	64532	328916	0.29	0.32	0.2	0.19	0	0.39	0.8699	0.3439	0.7253	1.9242	0	133279	155441	64554	70537	423811	0.29	0.4	0.15	0.16	0	0.31	0.8519	0.3823	0.7038	1.8384	28	40	68	968	1240	1217	1551	4976	0.19	0.25	0.24	0.31	0.56	0.8878	0.2714	0.7734	1.9671	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	26569	29901	10436	15998	18883	24906	23287	23782	13308	16986	24922	33018	20001	5935	14872	17013	20667	16525	20051	24352	13835	18019	13170	31030	15603	11384	10121	26592	16150	20098	15991	22367	10353	14115	15772	13007	9345	7845	11106	11292	12731	3702	30582	10538	11970	24558	12716	19366	13357	17024	8605	5290	15049	16628	14894	16899	4482	5723	6748	6420	23407	6070	11067	7777
NA	NC_029998	NC_029998.1	Gossypium raimondii mitochondrion; complete genome.	186100	186107	152638	151233	0	676078	0.28	0.28	0.23	0.22	0.45	0.9526	0.0046	0.9954	1.9926	29	46	75	18667	18881	16240	17943	0	71731	0.26	0.28	0.22	0.25	0.46	0.8982	0.2139	0.8194	1.9686	116	12	21	33	8023	9210	6311	6513	30057	0.27	0.32	0.2	0.22	0.41	0.8967	0.2231	0.8148	1.9539	102	3778	3326	3659	4119	0	14882	0.25	0.22	0.25	0.28	0.53	0.9222	0.1191	0.7902	1.992	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16	14	30	560	574	522	611	2267	0.25	0.25	0.23	0.27	0.5	0.8859	0.2118	0.8187	1.9762	1	5	6	2836	2430	2484	3148	10898	0.27	0.22	0.23	0.28	0	0.51	0.9191	0.2064	0.8163	1.9893	218	180	176	147	132	129	211	312	136	172	206	288	159	77	145	127	203	129	306	383	99	196	103	210	84	123	157	220	247	209	208	233	110	224	119	111	74	116	100	115	110	73	275	92	95	178	136	191	104	191	136	77	238	179	98	161	47	86	98	129	189	45	43	146
NA	NC_016668	NC_016668.1	Gossypium raimondii chloroplast; complete genome.	49549	50860	30194	29558	0	160161	0.31	0.32	0.19	0.18	0.37	0.9358	0.0237	0.9766	1.9529	58	70	128	33010	32550	19914	23444	0	108918	0.28	0.3	0.19	0.23	0.42	0.8962	0.2134	0.8148	1.9515	57	36	45	81	23369	23839	13621	15650	76479	0.3	0.31	0.17	0.21	0.39	0.8888	0.2628	0.7833	1.9302	57	2731	2509	1246	1524	0	8010	0.34	0.31	0.16	0.19	0.35	0.8989	0.1425	0.7806	1.924	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16	21	37	637	703	659	803	2802	0.23	0.25	0.24	0.29	0.53	0.877	0.2267	0.8115	1.9667	5	3	8	2344	1695	2149	2862	9050	0.26	0.21	0.23	0.3	0	0.53	0.9101	0.2812	0.7566	1.9791	587	363	494	491	351	358	591	1055	313	447	953	989	408	142	380	299	556	212	529	939	196	523	186	827	224	256	386	574	737	669	452	544	174	670	374	223	165	188	205	230	131	122	992	192	83	476	327	432	218	448	194	162	784	383	187	293	49	126	159	314	697	67	40	350