Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_001879085.1 | NC_031989 | NC_031989.1 | Nicotiana attenuata strain UT chromosome 1; NIATTr2; whole genome shotgun sequence. | 28533380 | 28523558 | 19026570 | 19024053 | 15431088 | 110538649 | 0.26 | 0.26 | 0.17 | 0.17 | 0.14 | 0.34 | 0.9448 | 0.0002 | 0.9998 | 1.8825 | 1092 | 949 | 2041 | 2710480 | 3044037 | 1663543 | 1823146 | 57186 | 9298392 | 0.29 | 0.32 | 0.18 | 0.21 | 0 | 0.39 | 0.9115 | 0.1626 | 0.8552 | 1.9466 | 1182 | 968 | 843 | 1811 | 668572 | 622658 | 433906 | 532222 | 3 | 2257361 | 0.29 | 0.27 | 0.19 | 0.24 | 0 | 0.43 | 0.8737 | 0.3056 | 0.7541 | 1.9504 | 0 | 1500955 | 1782830 | 901332 | 950208 | 41350 | 5176675 | 0.28 | 0.38 | 0.17 | 0.17 | 0 | 0.34 | 0.871 | 0.2944 | 0.7595 | 1.8903 | 0 | 84 | 69 | 153 | 48408 | 53253 | 29947 | 31410 | 0 | 163018 | 0.3 | 0.31 | 0.19 | 0.2 | 0 | 0.39 | 0.8751 | 0.2979 | 0.7567 | 1.9333 | 48 | 108950 | 122073 | 64782 | 66131 | 13388 | 375324 | 0.29 | 0.39 | 0.16 | 0.16 | 0 | 0.32 | 0.8698 | 0.2784 | 0.771 | 1.8694 | 0 | 31 | 31 | 62 | 900 | 1123 | 1149 | 1448 | 0 | 4620 | 0.19 | 0.24 | 0.25 | 0.31 | 0 | 0.56 | 0.8874 | 0.2419 | 0.7917 | 1.9704 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 19910 | 23546 | 8442 | 13052 | 14782 | 19212 | 17116 | 18780 | 8666 | 12395 | 20159 | 24711 | 15127 | 3746 | 11672 | 11587 | 15941 | 12127 | 13500 | 18066 | 10759 | 12316 | 9326 | 22617 | 12858 | 6920 | 8474 | 19204 | 12971 | 15346 | 10596 | 16592 | 7396 | 11461 | 12719 | 9811 | 6826 | 4827 | 8026 | 7451 | 9261 | 2955 | 23587 | 7548 | 8590 | 16685 | 8327 | 15960 | 10124 | 12185 | 4883 | 4008 | 11065 | 11864 | 11457 | 12160 | 3665 | 3533 | 3998 | 4624 | 17288 | 4324 | 8266 | 4802 |
GCF_001879085.1 | NC_031990 | NC_031990.1 | Nicotiana attenuata strain UT chromosome 2; NIATTr2; whole genome shotgun sequence. | 25892719 | 25778130 | 17293577 | 17197322 | 10197892 | 96359640 | 0.27 | 0.27 | 0.18 | 0.18 | 0.11 | 0.36 | 0.9445 | 0.005 | 0.995 | 1.9068 | 918 | 973 | 1891 | 2490056 | 2806201 | 1526537 | 1664060 | 55466 | 8542320 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9106 | 0.1648 | 0.8539 | 1.9456 | 2093 | 830 | 883 | 1713 | 630525 | 589989 | 412323 | 498679 | 8 | 2131524 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8738 | 0.3008 | 0.7569 | 1.9501 | 0 | 1399653 | 1668877 | 838832 | 880019 | 55160 | 4842541 | 0.28 | 0.38 | 0.17 | 0.17 | 0 | 0.34 | 0.8704 | 0.292 | 0.7616 | 1.8879 | 0 | 57 | 54 | 111 | 29279 | 31172 | 17136 | 18345 | 0 | 95932 | 0.3 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.8666 | 0.3067 | 0.7551 | 1.9195 | 0 | 59758 | 69694 | 33171 | 34972 | 39 | 197634 | 0.29 | 0.39 | 0.15 | 0.16 | 0 | 0.32 | 0.8695 | 0.2696 | 0.7771 | 1.8709 | 0 | 24 | 29 | 53 | 754 | 929 | 975 | 1245 | 0 | 3903 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8881 | 0.2576 | 0.7791 | 1.9683 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18639 | 21627 | 7969 | 12197 | 13974 | 17241 | 16182 | 17885 | 8450 | 11846 | 18839 | 22688 | 14732 | 3702 | 10994 | 11234 | 15103 | 11429 | 12821 | 17189 | 10388 | 11598 | 8589 | 21274 | 12251 | 6725 | 8203 | 18074 | 12277 | 14503 | 10060 | 15417 | 7072 | 11067 | 12220 | 9252 | 6714 | 4689 | 7566 | 6798 | 8839 | 2717 | 22148 | 6924 | 8160 | 15867 | 7803 | 15069 | 9627 | 11586 | 4708 | 3661 | 10687 | 11184 | 10685 | 11623 | 3596 | 3367 | 3759 | 4314 | 16559 | 4139 | 7486 | 4349 |
GCF_001879085.1 | NC_031991 | NC_031991.1 | Nicotiana attenuata strain UT chromosome 3; NIATTr2; whole genome shotgun sequence. | 19664694 | 19730612 | 13184799 | 13194735 | 7118373 | 72893213 | 0.27 | 0.27 | 0.18 | 0.18 | 0.1 | 0.36 | 0.9477 | 0.002 | 0.998 | 1.9128 | 675 | 670 | 1345 | 1840091 | 2089174 | 1151002 | 1248078 | 29245 | 6357590 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.39 | 0.912 | 0.1623 | 0.8555 | 1.9475 | 2750 | 607 | 607 | 1214 | 445504 | 422505 | 296470 | 357921 | 7 | 1522407 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8746 | 0.303 | 0.7551 | 1.9513 | 4 | 1038369 | 1246040 | 635694 | 665392 | 24731 | 3610226 | 0.27 | 0.38 | 0.17 | 0.18 | 0 | 0.34 | 0.8711 | 0.3046 | 0.7527 | 1.891 | 0 | 52 | 45 | 97 | 30309 | 34179 | 19092 | 19882 | 0 | 103462 | 0.3 | 0.32 | 0.19 | 0.2 | 0 | 0.38 | 0.8686 | 0.3142 | 0.7474 | 1.9227 | 0 | 69348 | 80203 | 41682 | 42419 | 3 | 233655 | 0.28 | 0.4 | 0.16 | 0.16 | 0 | 0.32 | 0.8695 | 0.2889 | 0.7639 | 1.8697 | 0 | 10 | 8 | 18 | 269 | 329 | 342 | 422 | 0 | 1362 | 0.2 | 0.24 | 0.25 | 0.31 | 0 | 0.56 | 0.8893 | 0.2262 | 0.8075 | 1.9678 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 12660 | 15299 | 5567 | 9072 | 9948 | 12571 | 11885 | 12732 | 6184 | 8389 | 13099 | 16302 | 10453 | 2473 | 8017 | 7873 | 11025 | 8292 | 9433 | 12316 | 7630 | 8494 | 6141 | 15339 | 9049 | 4786 | 5433 | 12664 | 8622 | 10460 | 7166 | 11329 | 5189 | 7590 | 8629 | 6635 | 4567 | 3357 | 5573 | 4964 | 6110 | 2010 | 15224 | 5076 | 5799 | 11457 | 5683 | 10667 | 6955 | 8255 | 3195 | 2564 | 7431 | 8247 | 7539 | 8438 | 2439 | 2451 | 2640 | 3168 | 11707 | 2961 | 5572 | 3111 |
GCF_001879085.1 | NC_031992 | NC_031992.1 | Nicotiana attenuata strain UT chromosome 4; NIATTr2; whole genome shotgun sequence. | 3524795 | 3488612 | 2304421 | 2294318 | 721060 | 12333206 | 0.29 | 0.28 | 0.19 | 0.19 | 0.06 | 0.37 | 0.9489 | 0.0074 | 0.9927 | 1.9353 | 153 | 175 | 328 | 364064 | 413302 | 219939 | 242438 | 3269 | 1243012 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9104 | 0.1622 | 0.8557 | 1.9451 | 3583 | 143 | 160 | 303 | 105864 | 98217 | 69235 | 83363 | 0 | 356679 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8735 | 0.3029 | 0.756 | 1.9486 | 0 | 181538 | 221476 | 104905 | 111769 | 3245 | 622933 | 0.28 | 0.38 | 0.17 | 0.17 | 0 | 0.34 | 0.8705 | 0.2967 | 0.7582 | 1.8867 | 0 | 6 | 11 | 17 | 6346 | 7545 | 3983 | 4645 | 0 | 22519 | 0.27 | 0.33 | 0.19 | 0.21 | 0 | 0.4 | 0.8824 | 0.3167 | 0.7413 | 1.9363 | 0 | 7825 | 8662 | 4555 | 4794 | 21 | 25857 | 0.29 | 0.37 | 0.16 | 0.18 | 0 | 0.34 | 0.8788 | 0.2826 | 0.7649 | 1.8963 | 0 | 3 | 4 | 7 | 95 | 124 | 131 | 162 | 0 | 512 | 0.18 | 0.24 | 0.26 | 0.32 | 0 | 0.58 | 0.8586 | 0.3217 | 0.738 | 1.952 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 3226 | 3733 | 1405 | 2057 | 2225 | 2798 | 2783 | 2959 | 1427 | 1897 | 3096 | 3900 | 2476 | 642 | 1844 | 1817 | 2475 | 1932 | 2091 | 2836 | 1775 | 1947 | 1507 | 3566 | 2010 | 1096 | 1399 | 2975 | 1977 | 2464 | 1647 | 2531 | 1132 | 1783 | 2082 | 1501 | 1116 | 759 | 1230 | 1168 | 1488 | 514 | 3936 | 1159 | 1281 | 2839 | 1331 | 2493 | 1477 | 1971 | 801 | 636 | 1878 | 1947 | 1710 | 2019 | 587 | 579 | 675 | 741 | 2746 | 654 | 1093 | 695 |
GCF_001879085.1 | NC_031993 | NC_031993.1 | Nicotiana attenuata strain UT chromosome 5; NIATTr2; whole genome shotgun sequence. | 16031311 | 15997432 | 10695587 | 10699861 | 3588586 | 57012777 | 0.28 | 0.28 | 0.19 | 0.19 | 0.06 | 0.38 | 0.9469 | 0.0013 | 0.9987 | 1.935 | 528 | 586 | 1114 | 1454969 | 1621191 | 882218 | 964123 | 26085 | 4948586 | 0.3 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9108 | 0.1624 | 0.8561 | 1.9455 | 3069 | 485 | 523 | 1008 | 356356 | 328841 | 230570 | 278140 | 3 | 1193910 | 0.3 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8738 | 0.299 | 0.7575 | 1.9511 | 0 | 813244 | 952196 | 478579 | 507107 | 25900 | 2777026 | 0.28 | 0.38 | 0.17 | 0.17 | 0 | 0.34 | 0.8707 | 0.2863 | 0.7662 | 1.8876 | 0 | 31 | 43 | 74 | 23818 | 28203 | 15066 | 15956 | 1 | 83044 | 0.28 | 0.32 | 0.19 | 0.2 | 0 | 0.39 | 0.8744 | 0.3289 | 0.7386 | 1.9209 | 0 | 49427 | 57144 | 29832 | 31386 | 75 | 167864 | 0.28 | 0.38 | 0.16 | 0.17 | 0 | 0.33 | 0.8769 | 0.2877 | 0.7639 | 1.883 | 0 | 9 | 14 | 23 | 311 | 407 | 441 | 549 | 0 | 1708 | 0.18 | 0.24 | 0.26 | 0.32 | 0 | 0.58 | 0.8892 | 0.2539 | 0.7831 | 1.9618 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10264 | 12240 | 4583 | 6885 | 7835 | 9566 | 8765 | 10071 | 4757 | 6472 | 10666 | 13056 | 8245 | 2065 | 6413 | 6280 | 8292 | 6383 | 6998 | 9571 | 5521 | 6475 | 4851 | 12062 | 6651 | 3694 | 4535 | 10068 | 6828 | 8124 | 5622 | 8574 | 3911 | 6102 | 6829 | 5143 | 3694 | 2709 | 4291 | 3954 | 4773 | 1504 | 12865 | 3943 | 4464 | 8776 | 4392 | 8563 | 5333 | 6515 | 2685 | 2082 | 6094 | 6399 | 6002 | 6722 | 1951 | 1762 | 2051 | 2377 | 9538 | 2425 | 4060 | 2460 |
GCF_001879085.1 | NC_031994 | NC_031994.1 | Nicotiana attenuata strain UT chromosome 6; NIATTr2; whole genome shotgun sequence. | 24930479 | 24973679 | 16753387 | 16753693 | 14160601 | 97571839 | 0.26 | 0.26 | 0.17 | 0.17 | 0.15 | 0.34 | 0.9444 | 0.0009 | 0.9991 | 1.8791 | 847 | 869 | 1716 | 2241543 | 2495187 | 1368240 | 1489644 | 37188 | 7631802 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9108 | 0.1619 | 0.8564 | 1.9459 | 2232 | 758 | 773 | 1531 | 530559 | 490542 | 340940 | 415615 | 3 | 1777659 | 0.3 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8735 | 0.3061 | 0.7532 | 1.9482 | 8 | 1251310 | 1465721 | 751115 | 789009 | 34918 | 4292073 | 0.28 | 0.38 | 0.17 | 0.17 | 0 | 0.34 | 0.8709 | 0.2925 | 0.7612 | 1.8908 | 0 | 53 | 67 | 120 | 45271 | 50641 | 27878 | 29819 | 0 | 153609 | 0.3 | 0.31 | 0.18 | 0.2 | 0 | 0.38 | 0.8741 | 0.3127 | 0.748 | 1.9238 | 0 | 81744 | 96390 | 46291 | 52239 | 1515 | 278179 | 0.29 | 0.4 | 0.15 | 0.16 | 0 | 0.31 | 0.8651 | 0.2962 | 0.7589 | 1.8564 | 0 | 28 | 22 | 50 | 720 | 929 | 900 | 1160 | 0 | 3709 | 0.19 | 0.25 | 0.24 | 0.31 | 0 | 0.56 | 0.8896 | 0.2602 | 0.7798 | 1.9676 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15786 | 18258 | 6818 | 10107 | 11598 | 14487 | 13509 | 15194 | 6745 | 9861 | 15859 | 19681 | 12116 | 3042 | 9353 | 9192 | 12037 | 9481 | 10429 | 14387 | 8231 | 9910 | 7260 | 17562 | 10017 | 5504 | 6963 | 14995 | 10258 | 12243 | 8313 | 13025 | 5897 | 9359 | 10375 | 7676 | 5428 | 3841 | 6402 | 5661 | 7173 | 2237 | 18855 | 5964 | 6721 | 13085 | 6499 | 12519 | 7795 | 9740 | 3781 | 2941 | 8997 | 9267 | 8805 | 9758 | 2757 | 2655 | 2955 | 3642 | 14348 | 3507 | 6209 | 3632 |
GCF_001879085.1 | NC_031995 | NC_031995.1 | Nicotiana attenuata strain UT chromosome 7; NIATTr2; whole genome shotgun sequence. | 28888040 | 28919307 | 19273510 | 19354651 | 18329698 | 114765206 | 0.25 | 0.25 | 0.17 | 0.17 | 0.16 | 0.34 | 0.9448 | 0.0026 | 0.9974 | 1.8674 | 965 | 934 | 1899 | 2535035 | 2847926 | 1560410 | 1699776 | 71475 | 8714622 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.911 | 0.1644 | 0.8538 | 1.9466 | 4447 | 871 | 846 | 1717 | 613528 | 574220 | 399684 | 485085 | 6 | 2072523 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8741 | 0.303 | 0.7558 | 1.9499 | 4 | 1430000 | 1690199 | 859039 | 906887 | 61552 | 4947677 | 0.28 | 0.38 | 0.17 | 0.17 | 0 | 0.34 | 0.8712 | 0.2938 | 0.7605 | 1.8902 | 0 | 63 | 60 | 123 | 39224 | 47538 | 25703 | 27303 | 0 | 139768 | 0.3 | 0.32 | 0.19 | 0.2 | 0 | 0.39 | 0.8719 | 0.3296 | 0.7363 | 1.9206 | 0 | 77405 | 91408 | 45173 | 47252 | 5378 | 266616 | 0.28 | 0.39 | 0.16 | 0.16 | 0 | 0.32 | 0.8707 | 0.2854 | 0.7653 | 1.8708 | 0 | 22 | 22 | 44 | 681 | 789 | 811 | 1015 | 0 | 3296 | 0.21 | 0.24 | 0.25 | 0.31 | 0 | 0.55 | 0.8893 | 0.2321 | 0.7987 | 1.9748 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17736 | 21158 | 7615 | 12104 | 13601 | 17053 | 15981 | 17769 | 8325 | 11527 | 18634 | 22552 | 14464 | 3461 | 10938 | 10828 | 14613 | 11050 | 12510 | 16855 | 9443 | 11838 | 8401 | 20965 | 11345 | 6319 | 7908 | 17268 | 11960 | 14364 | 9527 | 14946 | 6748 | 10269 | 11928 | 9013 | 6408 | 4518 | 7566 | 6639 | 8531 | 2711 | 21610 | 6847 | 7628 | 15474 | 7713 | 14422 | 9231 | 11279 | 4439 | 3427 | 10501 | 11283 | 10336 | 11363 | 3173 | 3135 | 3497 | 4320 | 16056 | 3955 | 7354 | 4312 |
GCF_001879085.1 | NC_031996 | NC_031996.1 | Nicotiana attenuata strain UT chromosome 8; NIATTr2; whole genome shotgun sequence. | 13462307 | 13402208 | 8938731 | 8892287 | 3059981 | 47755514 | 0.28 | 0.28 | 0.19 | 0.19 | 0.06 | 0.37 | 0.9472 | 0.0048 | 0.9952 | 1.9335 | 511 | 526 | 1037 | 1417720 | 1594040 | 869161 | 955933 | 79617 | 4916471 | 0.29 | 0.32 | 0.18 | 0.21 | 0 | 0.39 | 0.9111 | 0.1648 | 0.8536 | 1.9458 | 347 | 467 | 477 | 944 | 349386 | 325620 | 227815 | 276582 | 4 | 1179407 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8728 | 0.3091 | 0.751 | 1.9495 | 16 | 787543 | 936067 | 472104 | 501598 | 71481 | 2768793 | 0.28 | 0.38 | 0.17 | 0.18 | 0 | 0.34 | 0.8708 | 0.294 | 0.7604 | 1.8909 | 0 | 23 | 32 | 55 | 16072 | 17359 | 10008 | 10127 | 0 | 53566 | 0.3 | 0.31 | 0.18 | 0.2 | 0 | 0.38 | 0.8706 | 0.3248 | 0.7403 | 1.9209 | 0 | 45082 | 53520 | 26798 | 29943 | 6641 | 161984 | 0.28 | 0.38 | 0.16 | 0.17 | 0.01 | 0.33 | 0.8754 | 0.2638 | 0.7806 | 1.8746 | 0 | 13 | 14 | 27 | 406 | 442 | 510 | 637 | 0 | 1995 | 0.2 | 0.22 | 0.25 | 0.32 | 0 | 0.57 | 0.8857 | 0.2177 | 0.8105 | 1.9703 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10174 | 11669 | 4378 | 6745 | 7806 | 9679 | 9403 | 9795 | 4482 | 6518 | 10617 | 13051 | 8093 | 2039 | 6201 | 6153 | 8142 | 6203 | 6979 | 9616 | 5546 | 6702 | 4686 | 11843 | 6461 | 3504 | 4471 | 9584 | 7093 | 8225 | 5470 | 8614 | 3901 | 5963 | 6844 | 5218 | 3716 | 2428 | 4340 | 3869 | 4744 | 1464 | 12348 | 3941 | 4455 | 8833 | 4267 | 8283 | 5106 | 6398 | 2545 | 2224 | 5926 | 6482 | 5759 | 6556 | 1806 | 1869 | 2200 | 2432 | 9157 | 2267 | 4143 | 2461 |
GCF_001879085.1 | NC_031997 | NC_031997.1 | Nicotiana attenuata strain UT chromosome 9; NIATTr2; whole genome shotgun sequence. | 13920336 | 13816598 | 9279129 | 9251904 | 4707603 | 50975570 | 0.27 | 0.27 | 0.18 | 0.18 | 0.09 | 0.36 | 0.9474 | 0.0052 | 0.9948 | 1.9161 | 416 | 396 | 812 | 1120049 | 1250655 | 678467 | 735788 | 41854 | 3826813 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.39 | 0.9093 | 0.1703 | 0.8502 | 1.9442 | 1070 | 359 | 347 | 706 | 263800 | 243807 | 169333 | 205001 | 0 | 881941 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8727 | 0.3044 | 0.7542 | 1.9499 | 0 | 639973 | 750229 | 380666 | 395398 | 39875 | 2206141 | 0.28 | 0.38 | 0.17 | 0.17 | 0 | 0.34 | 0.8701 | 0.2901 | 0.7632 | 1.8869 | 0 | 28 | 29 | 57 | 16466 | 17990 | 10027 | 11111 | 0 | 55594 | 0.3 | 0.32 | 0.18 | 0.21 | 0 | 0.39 | 0.8732 | 0.3335 | 0.7337 | 1.9228 | 0 | 33891 | 41797 | 18955 | 20899 | 0 | 115542 | 0.28 | 0.4 | 0.15 | 0.16 | 0 | 0.32 | 0.8667 | 0.2932 | 0.7607 | 1.8636 | 0 | 22 | 15 | 37 | 524 | 735 | 637 | 859 | 0 | 2755 | 0.19 | 0.27 | 0.23 | 0.31 | 0 | 0.54 | 0.8889 | 0.3277 | 0.7328 | 1.9633 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 7815 | 9192 | 3443 | 4915 | 5843 | 7209 | 6653 | 7502 | 3460 | 4885 | 7713 | 9894 | 6208 | 1501 | 4574 | 4450 | 6120 | 4819 | 5219 | 7057 | 4142 | 4506 | 3631 | 8689 | 4909 | 2554 | 3752 | 7536 | 5131 | 5938 | 4234 | 6483 | 2879 | 4670 | 4996 | 3762 | 2661 | 1839 | 3269 | 2838 | 3500 | 1074 | 9553 | 2772 | 3223 | 6583 | 3132 | 6151 | 3896 | 4713 | 1804 | 1516 | 4345 | 4691 | 4362 | 5013 | 1539 | 1292 | 1537 | 1665 | 7142 | 1736 | 3135 | 1830 |
GCF_001879085.1 | NC_031998 | NC_031998.1 | Nicotiana attenuata strain UT chromosome 10; NIATTr2; whole genome shotgun sequence. | 14011844 | 14006202 | 9330555 | 9314851 | 4418754 | 51082206 | 0.27 | 0.27 | 0.18 | 0.18 | 0.09 | 0.37 | 0.9472 | 0.001 | 0.999 | 1.9195 | 485 | 503 | 988 | 1340428 | 1495011 | 815110 | 891003 | 23894 | 4565446 | 0.29 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9114 | 0.1596 | 0.8578 | 1.9464 | 1266 | 437 | 463 | 900 | 332404 | 313932 | 216630 | 262176 | 2 | 1125144 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8747 | 0.2975 | 0.7594 | 1.9507 | 0 | 729744 | 854424 | 430147 | 453960 | 21880 | 2490155 | 0.28 | 0.38 | 0.17 | 0.17 | 0 | 0.34 | 0.8704 | 0.2938 | 0.7603 | 1.8893 | 0 | 29 | 23 | 52 | 15843 | 17309 | 9568 | 10280 | 0 | 53000 | 0.29 | 0.32 | 0.19 | 0.2 | 0 | 0.39 | 0.8721 | 0.3013 | 0.7567 | 1.9262 | 0 | 36665 | 43557 | 22839 | 22784 | 1577 | 127422 | 0.28 | 0.39 | 0.16 | 0.16 | 0 | 0.32 | 0.8763 | 0.2725 | 0.7766 | 1.8695 | 0 | 15 | 11 | 26 | 398 | 470 | 464 | 599 | 0 | 1931 | 0.21 | 0.24 | 0.24 | 0.31 | 0 | 0.55 | 0.8907 | 0.2445 | 0.79 | 1.9694 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 9295 | 11249 | 4263 | 6610 | 7330 | 9178 | 8795 | 9650 | 4316 | 6250 | 10557 | 12197 | 7723 | 1899 | 5871 | 5721 | 7938 | 5949 | 6598 | 9499 | 5486 | 6318 | 4576 | 11615 | 6214 | 3427 | 4240 | 9384 | 6559 | 7509 | 5289 | 8297 | 3760 | 5700 | 6363 | 4876 | 3471 | 2494 | 3958 | 3600 | 4478 | 1420 | 11758 | 3584 | 4242 | 8579 | 4038 | 7860 | 5058 | 6109 | 2469 | 1983 | 5672 | 6045 | 5582 | 6223 | 1741 | 1738 | 1889 | 2362 | 8722 | 2128 | 3939 | 2294 |
GCF_001879085.1 | NC_031999 | NC_031999.1 | Nicotiana attenuata strain UT chromosome 11; NIATTr2; whole genome shotgun sequence. | 14964860 | 14887242 | 9951585 | 9932119 | 11516256 | 61252062 | 0.24 | 0.24 | 0.16 | 0.16 | 0.19 | 0.32 | 0.9477 | 0.0036 | 0.9964 | 1.8443 | 497 | 483 | 980 | 1438144 | 1603540 | 880610 | 954952 | 17375 | 4894621 | 0.3 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9116 | 0.1562 | 0.8606 | 1.9469 | 245 | 437 | 433 | 870 | 317558 | 297087 | 208108 | 249834 | 6 | 1072593 | 0.29 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8739 | 0.3029 | 0.7558 | 1.9495 | 4 | 796258 | 931394 | 473959 | 498721 | 16135 | 2716467 | 0.28 | 0.38 | 0.17 | 0.17 | 0 | 0.34 | 0.871 | 0.2905 | 0.7631 | 1.8905 | 0 | 41 | 35 | 76 | 30326 | 34774 | 19309 | 21232 | 0 | 105641 | 0.3 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.8745 | 0.2944 | 0.761 | 1.9281 | 0 | 53093 | 61729 | 31744 | 32110 | 1070 | 179746 | 0.28 | 0.39 | 0.16 | 0.17 | 0 | 0.33 | 0.8766 | 0.2708 | 0.7769 | 1.8832 | 0 | 16 | 10 | 26 | 381 | 451 | 490 | 576 | 0 | 1898 | 0.2 | 0.24 | 0.26 | 0.3 | 0 | 0.56 | 0.8927 | 0.1902 | 0.8331 | 1.9761 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 9229 | 10741 | 4113 | 6101 | 7107 | 8938 | 8268 | 8906 | 4226 | 5905 | 9472 | 11441 | 7570 | 1769 | 5765 | 5338 | 7582 | 5701 | 6461 | 8611 | 4982 | 5719 | 4496 | 10831 | 5943 | 3310 | 4122 | 9034 | 6093 | 7247 | 5138 | 7866 | 3482 | 5403 | 6223 | 4679 | 3301 | 2397 | 3945 | 3521 | 4238 | 1437 | 11204 | 3489 | 4049 | 7969 | 3783 | 7672 | 4788 | 5781 | 2273 | 1849 | 5492 | 5835 | 5239 | 6012 | 1682 | 1563 | 1894 | 2191 | 8456 | 2206 | 4037 | 2247 |
GCF_001879085.1 | NC_032000 | NC_032000.1 | Nicotiana attenuata strain UT chromosome 12; NIATTr2; whole genome shotgun sequence. | 14582859 | 14582958 | 9641588 | 9665020 | 5018632 | 53491057 | 0.27 | 0.27 | 0.18 | 0.18 | 0.09 | 0.36 | 0.9464 | 0.0012 | 0.9988 | 1.9139 | 527 | 503 | 1030 | 1394510 | 1556066 | 838906 | 922365 | 47520 | 4759367 | 0.3 | 0.32 | 0.18 | 0.2 | 0 | 0.38 | 0.9101 | 0.1643 | 0.8543 | 1.9429 | 2722 | 473 | 455 | 928 | 346911 | 320921 | 218914 | 269985 | 6 | 1156737 | 0.3 | 0.28 | 0.19 | 0.24 | 0 | 0.43 | 0.8731 | 0.3052 | 0.7542 | 1.9489 | 0 | 775726 | 914170 | 458401 | 481913 | 44996 | 2675206 | 0.28 | 0.38 | 0.16 | 0.17 | 0 | 0.34 | 0.8691 | 0.2966 | 0.7585 | 1.8859 | 0 | 39 | 24 | 63 | 20517 | 22420 | 12633 | 13486 | 0 | 69056 | 0.29 | 0.31 | 0.19 | 0.2 | 0 | 0.39 | 0.8743 | 0.3049 | 0.7538 | 1.9268 | 0 | 43039 | 51195 | 26606 | 27644 | 26 | 148510 | 0.28 | 0.41 | 0.15 | 0.16 | 0 | 0.31 | 0.8654 | 0.3122 | 0.7486 | 1.8522 | 0 | 11 | 21 | 32 | 496 | 566 | 581 | 736 | 0 | 2379 | 0.21 | 0.24 | 0.24 | 0.31 | 0 | 0.55 | 0.8913 | 0.2395 | 0.795 | 1.9745 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10094 | 11851 | 4425 | 6669 | 7479 | 9527 | 8637 | 9676 | 4459 | 6529 | 10557 | 12865 | 7966 | 1994 | 6127 | 5968 | 8107 | 6107 | 6877 | 9589 | 5213 | 6468 | 4506 | 11743 | 6260 | 3380 | 4431 | 9711 | 6790 | 7945 | 5401 | 8276 | 3696 | 6033 | 6764 | 4936 | 3321 | 2339 | 4060 | 3613 | 4811 | 1404 | 12506 | 3782 | 4214 | 8442 | 4101 | 8293 | 5329 | 6382 | 2466 | 1946 | 6140 | 6049 | 5753 | 6248 | 1988 | 1656 | 1950 | 2281 | 9278 | 2422 | 4195 | 2359 |