GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000231095.2	NC_023163	NC_023163.2	Oryza brachyantha chromosome 1; ObraRS2; whole genome shotgun sequence.	9842695	9854415	6935218	6922463	100	33554891	0.29	0.29	0.21	0.21	0.41	0.955	0.0015	0.9985	1.978	1812	1805	3617	3530504	4028351	2943277	3043034	0	13545166	0.24	0.27	0.24	0.24	0.48	0.9129	0.1234	0.8875	1.9708	8144	1655	1655	3310	1039724	977597	1189472	1274667	4481460	0.25	0.24	0.24	0.27	0.51	0.8661	0.2857	0.7675	1.936	0	1719072	2141170	1106769	1121537	0	6088548	0.26	0.37	0.19	0.18	0.37	0.869	0.3013	0.7556	1.9045	86	95	181	40828	43854	35129	36300	156111	0.27	0.27	0.23	0.24	0	0.47	0.8712	0.2845	0.7687	1.941	0	78229	93728	53879	52203	278039	0.27	0.36	0.19	0.18	0	0.36	0.8742	0.2809	0.7697	1.9062	37	31	68	1003	1176	1279	1603	5061	0.2	0.23	0.25	0.32	0.57	0.8818	0.2299	0.8027	1.9652	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	35094	41310	10222	15679	26458	47883	27230	19857	27080	25307	19850	27927	22286	17733	14122	24049	20275	34216	32498	18511	34793	19340	37736	29506	31465	21855	11700	22802	14012	24148	26386	21869	27278	13356	19524	35511	20919	18055	21135	43098	25721	24440	22596	40369	23853	20852	24139	21146	13524	18529	20624	37927	9641	19183	25487	21480	4977	21175	27462	10645	22503	5550	14372	10876
GCF_000231095.2	NC_023164	NC_023164.2	Oryza brachyantha chromosome 2; ObraRS2; whole genome shotgun sequence.	8019995	8033210	5705156	5718217	100	27476678	0.29	0.29	0.21	0.21	0.42	0.9542	0.002	0.998	1.9794	1488	1430	2918	2828674	3241065	2354041	2449840	0	10873620	0.24	0.28	0.23	0.24	0.48	0.9129	0.1297	0.8823	1.971	2203	1345	1312	2657	867784	805000	953942	1035996	3662722	0.26	0.24	0.23	0.27	0.5	0.8668	0.2923	0.7629	1.9357	0	1353604	1711775	883699	892689	0	4841767	0.26	0.37	0.19	0.18	0.37	0.8681	0.3082	0.7508	1.9022	97	77	174	36415	38916	31106	32916	139353	0.26	0.27	0.23	0.24	0	0.47	0.8718	0.2757	0.7736	1.9426	0	67291	78769	49113	48910	244083	0.27	0.36	0.19	0.18	0	0.37	0.873	0.3075	0.7532	1.9031	29	26	55	805	962	1031	1301	4099	0.2	0.23	0.25	0.32	0.57	0.8839	0.262	0.7768	1.964	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	29159	35322	8319	13321	22054	40627	23400	16894	21337	19804	17337	25023	18566	13004	11828	19552	17160	27260	25135	15635	27514	16127	30311	25872	25704	17019	9689	19270	11686	20153	21253	18799	21520	11269	15995	28719	16741	14251	15918	34465	20664	19625	19609	31582	18836	17740	19545	17439	11122	15739	15873	30020	8253	15798	20579	17656	4058	16193	21025	8544	19278	4444	11784	8592
GCF_000231095.2	NC_023165	NC_023165.2	Oryza brachyantha chromosome 3; ObraRS2; whole genome shotgun sequence.	8739150	8728071	6203495	6185224	100	29856040	0.29	0.29	0.21	0.21	0.41	0.9562	0.0021	0.9979	1.979	1707	1578	3285	3225108	3689879	2680468	2794833	0	12390288	0.24	0.28	0.24	0.24	0.48	0.9134	0.1256	0.8855	1.9716	2341	1582	1449	3031	966603	894004	1079608	1170461	4110676	0.26	0.24	0.24	0.27	0.51	0.8655	0.2891	0.7655	1.9342	0	1578278	1986486	1031086	1049657	0	5645507	0.26	0.37	0.19	0.18	0.37	0.869	0.3094	0.7502	1.9041	77	78	155	30350	32585	26365	28022	117322	0.27	0.27	0.22	0.24	0	0.46	0.8704	0.2872	0.7647	1.9416	0	73445	82407	47600	47749	251201	0.27	0.37	0.18	0.18	0	0.36	0.8741	0.2807	0.7727	1.9039	28	30	58	852	1007	1090	1346	4295	0.2	0.23	0.25	0.31	0.57	0.8847	0.2307	0.8013	1.9681	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	32452	40141	9124	14497	24410	45611	25399	18413	24481	22370	19237	26829	20308	15510	13264	21780	18476	30751	29562	16836	31815	17950	34330	28011	29418	19470	10492	20590	12791	21952	24465	20143	24689	12189	17927	33064	18792	16461	18459	39289	23580	22295	21555	36651	21641	19769	21934	19618	12252	17108	18288	34745	8706	16962	23489	19233	4411	18810	24254	9468	20903	5036	13703	9689
GCF_000231095.2	NC_023166	NC_023166.2	Oryza brachyantha chromosome 4; ObraRS2; whole genome shotgun sequence.	6364250	6332327	4572864	4557838	100	21827379	0.29	0.29	0.21	0.21	0.42	0.9552	0.0042	0.9958	1.9807	1082	1140	2222	2171514	2457450	1799921	1868634	0	8297519	0.24	0.27	0.24	0.25	0.48	0.913	0.121	0.8897	1.9704	1937	982	1034	2016	640506	602487	728468	786511	2757972	0.26	0.24	0.24	0.27	0.51	0.8663	0.2847	0.7686	1.9356	0	1023144	1261876	655241	660454	0	3600715	0.26	0.37	0.19	0.18	0.37	0.8693	0.2969	0.759	1.9048	69	67	136	33253	33889	28248	30109	125499	0.27	0.27	0.22	0.24	0	0.47	0.8733	0.2943	0.7596	1.9458	0	82795	94017	56086	55536	288434	0.27	0.36	0.19	0.18	0	0.37	0.874	0.2707	0.7784	1.9118	17	25	42	609	708	789	999	3105	0.19	0.23	0.25	0.32	0.58	0.883	0.2393	0.7952	1.964	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21861	25661	6405	9596	16837	29315	16944	12065	16429	15483	12217	17473	13749	11033	8737	15017	12336	21315	19935	11320	22281	11758	23069	18239	19330	13301	7304	14090	8388	14899	16384	13556	16962	8402	11873	21760	12758	10621	12694	26110	16009	14464	13921	24953	14893	13009	14747	12662	8173	11475	13132	23477	6113	11383	15617	12911	3103	12951	16912	6563	13640	3393	8597	6822
GCF_000231095.2	NC_023167	NC_023167.2	Oryza brachyantha chromosome 5; ObraRS2; whole genome shotgun sequence.	5966224	5958390	4161445	4159240	100	20245399	0.29	0.29	0.21	0.21	0.41	0.9547	0.0009	0.9991	1.977	1016	1026	2042	2018806	2294501	1666454	1734243	0	7714004	0.24	0.28	0.24	0.24	0.48	0.912	0.1288	0.883	1.9699	1192	947	937	1884	588785	544036	665990	719170	2517981	0.26	0.24	0.24	0.27	0.51	0.8649	0.2927	0.7628	1.9343	0	977960	1215257	626250	637022	0	3456489	0.26	0.37	0.19	0.18	0.37	0.8678	0.3062	0.7524	1.902	38	54	92	19951	21986	17506	18271	77714	0.26	0.27	0.22	0.24	0	0.46	0.8712	0.2739	0.7743	1.9437	0	38504	46151	26623	26510	137788	0.27	0.36	0.19	0.18	0	0.37	0.8778	0.2641	0.782	1.9145	18	26	44	607	755	853	1036	3251	0.19	0.23	0.26	0.32	0.58	0.8895	0.2409	0.7938	1.9615	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	19758	24089	5599	8698	14752	27825	15361	11072	14927	13475	11199	16511	11952	9712	7911	13444	10990	19246	18190	10324	19444	10931	21278	16688	17692	12034	6337	12279	7658	13614	14929	12291	15611	7459	10749	20420	11889	9918	11378	24540	14429	13851	13101	22902	13094	11763	13580	11884	7517	10791	11442	21630	5403	10577	14386	12049	2771	11873	15322	5770	13059	3124	8189	5988
GCF_000231095.2	NC_023168	NC_023168.2	Oryza brachyantha chromosome 6; ObraRS2; whole genome shotgun sequence.	6451173	6446539	4559611	4517213	100	21974636	0.29	0.29	0.21	0.21	0.41	0.9541	0.005	0.995	1.9781	995	1040	2035	2040587	2308246	1694279	1755315	0	7798427	0.24	0.27	0.24	0.25	0.48	0.9114	0.1241	0.8871	1.9694	684	909	952	1861	600749	567745	694663	737588	2600745	0.26	0.24	0.24	0.27	0.51	0.8661	0.2838	0.7689	1.9347	0	981038	1208481	637053	647995	0	3474567	0.26	0.37	0.18	0.18	0.37	0.8674	0.3098	0.7498	1.9014	59	58	117	28947	30512	24524	26006	109989	0.27	0.27	0.22	0.24	0	0.46	0.8723	0.2932	0.7646	1.9408	35	46319	53241	29063	29218	157841	0.28	0.37	0.18	0.17	0	0.36	0.8704	0.2849	0.771	1.8987	14	15	29	397	508	553	704	2162	0.18	0.23	0.26	0.33	0.58	0.8819	0.2729	0.7687	1.9602	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20688	24032	5704	9128	15086	27707	15689	11588	15708	14310	12065	16244	12639	10418	8125	14269	11811	20019	18887	10660	20358	10895	22986	17433	17935	12834	6748	12764	8148	13687	15712	12754	16543	7794	11078	21059	12064	10421	12185	25283	14966	14303	12987	23881	13796	11988	13883	11279	7838	10995	12029	22612	5609	10693	14019	12467	2538	12447	16196	6043	12902	3099	8373	5934
GCF_000231095.2	NC_023169	NC_023169.2	Oryza brachyantha chromosome 7; ObraRS2; whole genome shotgun sequence.	5713945	5716878	4008424	4010747	100	19450094	0.29	0.29	0.21	0.21	0.41	0.9546	0.0005	0.9995	1.9777	1012	871	1883	1854208	2124941	1542177	1602691	0	7124017	0.24	0.27	0.24	0.25	0.48	0.9112	0.1274	0.8843	1.9693	1681	933	801	1734	557532	522697	630287	678339	2388855	0.26	0.24	0.24	0.27	0.5	0.8658	0.2877	0.7664	1.935	0	905362	1136920	587342	598554	0	3228178	0.26	0.37	0.18	0.18	0.36	0.8682	0.3068	0.7523	1.9003	45	44	89	20794	22506	18043	18441	79784	0.26	0.28	0.22	0.23	0	0.46	0.8744	0.2838	0.7676	1.9412	0	34163	41056	25221	24252	124692	0.27	0.37	0.18	0.18	0	0.36	0.872	0.2963	0.7597	1.9023	19	10	29	418	510	556	689	2173	0.19	0.23	0.26	0.32	0.58	0.8735	0.2656	0.7767	1.9601	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18864	22662	5338	8340	13487	25762	14259	10579	13799	13092	11131	15492	11687	9195	7636	12924	10567	18495	17315	9897	18689	10228	20529	16552	16453	11494	6188	12225	7598	12806	14071	11867	14766	7086	10141	19299	10995	9582	11048	23078	13748	12843	12429	21471	12864	11462	12553	11158	7271	9954	10954	20196	5133	10125	13699	11681	2585	10671	14624	5437	11785	2960	7603	5472
GCF_000231095.2	NC_023170	NC_023170.2	Oryza brachyantha chromosome 8; ObraRS2; whole genome shotgun sequence.	5383944	5393525	3759182	3763161	100	18299912	0.29	0.29	0.21	0.21	0.41	0.9538	0.0014	0.9986	1.9771	854	799	1653	1654070	1853193	1357289	1399433	100	6264085	0.25	0.28	0.24	0.24	0.48	0.9116	0.1266	0.8847	1.9698	3373	782	721	1503	475071	439244	536135	575525	2025975	0.26	0.24	0.24	0.27	0.51	0.8658	0.2904	0.7642	1.9343	0	830872	1005599	540133	537362	100	2914066	0.27	0.37	0.18	0.18	0.36	0.8676	0.3044	0.7541	1.9007	36	56	92	20112	21447	16116	17743	75418	0.26	0.27	0.22	0.25	0	0.47	0.8663	0.2799	0.7712	1.9439	12	43349	48813	28265	28477	148904	0.27	0.37	0.18	0.18	0	0.36	0.8743	0.2726	0.7765	1.9065	21	9	30	431	531	560	701	2223	0.19	0.24	0.25	0.32	0.57	0.8904	0.2463	0.7876	1.9683	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	16323	19633	4570	7124	12119	22370	12569	9025	11962	11158	9293	13107	10106	7314	6187	11237	8891	15217	14361	8151	15456	8830	17513	13834	14368	9654	5356	10291	6312	11152	12029	9828	12415	5922	8724	16371	9670	7937	9333	20009	11454	11206	10426	18381	10342	9514	10716	9234	5851	8622	8847	16780	4359	8785	11318	9648	2171	9377	11899	4694	10432	2319	6378	4795
GCF_000231095.2	NC_023171	NC_023171.2	Oryza brachyantha chromosome 9; ObraRS2; whole genome shotgun sequence.	4484723	4495989	3250517	3275127	200	15506556	0.29	0.29	0.21	0.21	0.42	0.9439	0.005	0.995	1.9818	732	701	1433	1392766	1567866	1149011	1194760	0	5304403	0.24	0.27	0.24	0.25	0.48	0.9107	0.1255	0.886	1.9693	592	648	628	1276	398798	373471	455740	488471	1716480	0.25	0.24	0.24	0.27	0.51	0.8667	0.2853	0.7682	1.9348	0	691989	844826	448138	456465	0	2441418	0.27	0.37	0.18	0.18	0.37	0.868	0.3021	0.7556	1.9014	45	42	87	21912	22327	17267	18463	79969	0.28	0.27	0.21	0.24	0	0.45	0.8714	0.2773	0.7732	1.9454	0	30759	36403	18916	18651	104729	0.27	0.37	0.19	0.17	0	0.36	0.872	0.3015	0.7563	1.8987	20	19	39	564	689	712	910	2875	0.2	0.24	0.25	0.32	0.57	0.8873	0.2547	0.7831	1.9654	11	0	11	3483	3102	3773	4430	14788	0.23	0.21	0.27	0.29	0	0.56	0.9047	0.1163	0.8934	1.9814	13605	16113	3868	6062	10162	18409	10451	7453	10508	9615	7591	10808	8544	6687	5353	9401	7619	12825	12233	6977	13269	7441	14466	11072	11655	8397	4523	8759	5383	9260	10065	8363	10418	5088	7348	13991	8102	6615	7922	17045	9909	9317	8689	15725	9451	8018	9105	8026	5361	7328	7717	14642	3738	7284	9470	8013	1950	8268	10407	4018	8585	2251	5468	4185
GCF_000231095.2	NC_023172	NC_023172.2	Oryza brachyantha chromosome 10; ObraRS2; whole genome shotgun sequence.	4700913	4689563	3422984	3432660	200	16246320	0.29	0.29	0.21	0.21	0.42	0.9512	0.0026	0.9974	1.9824	645	662	1307	1296986	1454322	1068647	1114614	0	4934569	0.24	0.27	0.24	0.25	0.48	0.9105	0.1269	0.8857	1.9698	1574	561	602	1163	384090	361297	435584	472644	1653615	0.25	0.24	0.24	0.27	0.51	0.8666	0.2804	0.7711	1.9349	0	615995	752192	393714	399973	0	2161874	0.26	0.37	0.19	0.18	0.37	0.8675	0.3044	0.7542	1.9009	62	39	101	21384	22018	18228	19065	80695	0.27	0.26	0.23	0.24	0	0.47	0.8718	0.2736	0.7749	1.9465	0	38644	44075	26387	25580	134686	0.27	0.37	0.19	0.18	0	0.36	0.8704	0.2946	0.7636	1.8906	10	10	20	295	330	375	477	1477	0.2	0.22	0.25	0.32	0.58	0.8758	0.2418	0.7935	1.9615	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13229	15322	3706	5466	9746	18206	9915	7391	9319	8971	7825	10477	7967	6346	5351	9142	7502	12779	11887	6724	13283	7816	14163	10973	11526	7826	4443	8728	5367	9125	9832	8354	10329	4922	7048	13444	7878	6396	7819	15852	9643	8939	8334	15317	8909	7728	8969	7405	4726	6972	7225	14197	3591	6685	9203	7533	1784	7582	10030	3752	8264	1925	4756	3785
GCF_000231095.2	NC_023173	NC_023173.2	Oryza brachyantha chromosome 11; ObraRS2; whole genome shotgun sequence.	5149785	5155996	3610869	3617340	100	17534090	0.29	0.29	0.21	0.21	0.41	0.9531	0.0015	0.9985	1.9777	702	723	1425	1490923	1645937	1173204	1213165	0	5523229	0.25	0.28	0.23	0.24	0.47	0.9124	0.1196	0.8911	1.971	3502	617	605	1222	422759	394510	461585	492352	1771206	0.26	0.24	0.24	0.27	0.5	0.868	0.2798	0.7722	1.939	0	692435	826508	421112	426517	0	2366572	0.27	0.37	0.18	0.17	0.35	0.8679	0.2934	0.7619	1.8966	54	38	92	24222	26944	19855	20900	91921	0.26	0.28	0.23	0.24	0	0.46	0.8718	0.2729	0.7777	1.9362	0	46665	53716	29938	29817	160136	0.27	0.37	0.19	0.18	0	0.37	0.8763	0.291	0.7657	1.9063	17	9	26	372	474	484	606	1936	0.19	0.25	0.25	0.31	0.56	0.8866	0.279	0.766	1.9648	0	59	59	1805	1573	1751	1848	6977	0.26	0.23	0.25	0.26	0	0.52	0.9035	0.1012	0.9055	1.9963	14099	16790	4038	6439	10387	18835	10794	8387	10295	10007	8383	11432	9152	6517	5822	9826	8389	13073	12280	7775	13762	7645	15072	12050	12078	8567	4967	9337	5814	9605	10845	9241	10359	5464	8204	14170	8462	6497	8061	15992	10359	8819	9552	15030	9605	8318	8900	8583	5681	7919	7705	13487	4079	7711	9936	8890	2044	7578	9655	4075	9399	2306	5922	4286
GCF_000231095.2	NC_023174	NC_023174.2	Oryza brachyantha chromosome 12; ObraRS2; whole genome shotgun sequence.	4952045	4934811	3509427	3535573	100	16931956	0.29	0.29	0.21	0.21	0.42	0.9523	0.0055	0.9946	1.9796	665	672	1337	1353210	1538806	1094976	1132984	0	5119976	0.25	0.28	0.23	0.24	0.47	0.9118	0.1289	0.8831	1.971	953	592	609	1201	403092	376001	439602	471562	1690257	0.26	0.24	0.23	0.27	0.5	0.8662	0.2889	0.7657	1.9372	0	635187	789528	404654	407827	0	2237196	0.27	0.37	0.18	0.18	0.36	0.8672	0.3053	0.7528	1.8979	42	39	81	17972	19407	16690	17196	71265	0.27	0.27	0.23	0.24	0	0.47	0.8685	0.2843	0.7686	1.9397	0	31249	38007	20578	20507	110341	0.27	0.37	0.18	0.18	0	0.36	0.8761	0.2871	0.7664	1.9061	19	15	34	473	613	643	773	2502	0.19	0.24	0.26	0.31	0.57	0.8791	0.2792	0.7676	1.9602	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13889	16173	3935	6090	10373	18354	10490	7878	9857	9256	8219	11461	8643	5849	5628	9000	7862	12633	11834	7281	13201	7341	14705	11755	11781	7967	4485	9128	5386	8871	10145	8762	10258	5264	7556	13142	7925	6361	7538	15676	9803	8466	9266	14448	8608	8235	8329	8064	5303	7748	7056	12999	3878	7362	9684	8286	1921	7247	9161	3719	9008	2063	5306	3815
NA	NC_030596	NC_030596.1	Oryza brachyantha chloroplast; complete genome.	41236	40898	26136	26334	0	134604	0.31	0.3	0.19	0.2	0.39	0.9381	0.0079	0.9921	1.9647	59	70	129	25820	25588	16573	19674	0	87655	0.28	0.29	0.2	0.23	0.43	0.896	0.2301	0.802	1.9538	67	36	44	80	17011	18013	10492	12060	57576	0.3	0.32	0.17	0.21	0.38	0.8894	0.2803	0.7712	1.9271	67	2136	1944	1041	1222	0	6343	0.34	0.31	0.17	0.19	0.36	0.8992	0.1199	0.7793	1.9351	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	18	20	38	632	708	686	840	2866	0.22	0.24	0.24	0.3	0.54	0.878	0.2378	0.799	1.9687	4	4	8	2412	1740	2160	2878	9190	0.27	0.21	0.22	0.3	0	0.52	0.9095	0.3007	0.7457	1.9756	463	279	413	420	346	254	531	789	272	348	537	739	238	122	287	211	363	158	407	720	121	434	147	535	161	185	310	388	542	542	314	445	136	472	275	158	114	177	159	167	104	103	703	140	56	426	265	327	151	318	127	136	665	312	109	219	42	99	101	266	509	55	28	247