GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_016808335.1	NC_053136	NC_053136.1	Panicum virgatum strain AP13 chromosome 1K; P.virgatum_v5; whole genome shotgun sequence.	15041760	15039896	13312589	13330057	270000	56994302	0.26	0.26	0.23	0.23	0	0.47	0.9548	0.0007	0.9993	1.9947	1993	1935	3928	3681006	4161001	3433880	3490017	0	14765904	0.24	0.27	0.25	0.25	0.5	0.9119	0.1362	0.8771	1.9714	22019	1600	1606	3206	975103	899018	1104151	1177748	4156020	0.26	0.23	0.24	0.27	0.51	0.8667	0.2914	0.7638	1.9329	0	1605518	1990575	1300123	1310184	0	6206400	0.25	0.36	0.19	0.19	0.38	0.8701	0.3095	0.7495	1.9105	0	337	293	630	188126	211045	175496	173445	748112	0.25	0.27	0.24	0.24	0	0.48	0.8785	0.2628	0.7827	1.9439	0	177913	211440	139870	138592	0	667815	0.26	0.36	0.2	0.18	0	0.38	0.871	0.3204	0.7432	1.9083	29	26	55	795	945	1044	1320	4104	0.19	0.23	0.25	0.32	0.58	0.8763	0.2716	0.772	1.9587	1	0	1	29	28	28	34	119	0.24	0.24	0.24	0.29	0	0.52	0.8809	0.1143	0.8945	1.9951	32349	39936	9217	15019	25231	45856	26439	18733	24272	22507	19492	27796	20654	14307	13439	22432	18739	30004	28297	17235	32936	17571	34818	28794	29999	19760	11230	21512	13041	22332	23846	20907	23731	12424	17963	32487	19512	18437	17942	41412	24173	24105	21759	37387	22074	19230	22149	19166	12495	17370	16908	35164	9203	17891	22905	20028	4257	19394	24626	9125	21817	4699	12846	9746
GCF_016808335.1	NC_053137	NC_053137.1	Panicum virgatum strain AP13 chromosome 2K; P.virgatum_v5; whole genome shotgun sequence.	18196406	18231526	16083696	16090001	410000	69011629	0.26	0.26	0.23	0.23	0.01	0.47	0.9511	0.0012	0.9988	1.9939	2210	2165	4375	4028662	4532233	3785442	3838247	10000	16194584	0.24	0.27	0.25	0.25	0.5	0.9119	0.1346	0.8785	1.9721	39870	1786	1769	3555	1068497	996498	1239156	1309552	4613703	0.25	0.23	0.24	0.27	0.51	0.8669	0.2884	0.7658	1.9328	163	1738775	2125877	1412110	1418557	10000	6705319	0.25	0.36	0.2	0.19	0.38	0.8704	0.3077	0.7506	1.9119	0	358	353	711	212865	238352	189466	192882	833565	0.26	0.27	0.23	0.24	0	0.47	0.8779	0.2625	0.7826	1.9462	0	158040	187757	121642	119708	0	587147	0.26	0.36	0.19	0.18	0	0.37	0.8682	0.3211	0.743	1.9046	29	21	50	727	875	942	1193	3737	0.19	0.23	0.25	0.32	0.57	0.8782	0.2659	0.7755	1.9606	4	7	11	2476	2312	2334	2787	9909	0.25	0.24	0.25	0.27	0	0.52	0.8998	0.0971	0.9095	1.9952	35589	43452	10374	16389	27645	48649	28419	20167	27615	26478	20967	29576	22637	16571	15071	24418	20079	33644	32586	19066	37083	19500	38573	30926	32505	22352	12200	23332	14526	24429	26791	22471	27019	13321	20287	36192	21823	21237	20760	46078	27034	27602	23652	41916	25302	21100	24571	21316	14109	18803	19596	38971	9552	19937	25797	23194	4905	22273	28881	10801	23059	5214	14232	10857
GCF_016808335.1	NC_053138	NC_053138.1	Panicum virgatum strain AP13 chromosome 3K; P.virgatum_v5; whole genome shotgun sequence.	17048187	17070367	14964087	14943975	320000	64346616	0.26	0.27	0.23	0.23	0	0.46	0.9561	0.0013	0.9987	1.9941	2230	2238	4468	4169536	4693505	3936927	3990178	20000	16810146	0.24	0.27	0.25	0.25	0.5	0.9115	0.1361	0.8771	1.9719	24209	1840	1823	3663	1083719	1001212	1264646	1338158	4687735	0.25	0.23	0.24	0.27	0.51	0.8666	0.2899	0.7648	1.9326	0	1774532	2182278	1457699	1460580	10000	6885089	0.25	0.36	0.2	0.19	0.38	0.8699	0.3097	0.7489	1.9117	0	341	366	707	197002	221455	183742	185674	787873	0.25	0.27	0.23	0.24	0	0.48	0.8763	0.2686	0.7794	1.9417	7	200617	240919	161186	160324	0	763046	0.26	0.36	0.2	0.18	0	0.38	0.8723	0.314	0.7472	1.9103	32	32	64	908	1122	1209	1485	4724	0.19	0.24	0.26	0.31	0.57	0.8898	0.2426	0.792	1.9656	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	36543	44694	10145	16348	28167	50905	28801	19954	28057	25907	20811	29494	22506	17131	14891	25417	20193	34683	32819	18795	38236	19714	39618	31051	33407	23100	11968	23225	13807	24453	27925	22552	28333	13375	19692	37589	22348	21460	21062	48335	28057	28189	23680	43688	25025	20792	25370	21355	13758	19541	19800	40068	9397	20207	26489	22954	5064	22874	28833	10751	23717	5376	14790	10697
GCF_016808335.1	NC_053139	NC_053139.1	Panicum virgatum strain AP13 chromosome 4K; P.virgatum_v5; whole genome shotgun sequence.	12742916	12736770	11181586	11175546	250000	48086818	0.26	0.26	0.23	0.23	0.01	0.46	0.9547	0.0005	0.9995	1.994	1562	1434	2996	2757662	3102853	2594019	2636185	10000	11100719	0.24	0.27	0.25	0.25	0.5	0.911	0.1366	0.8769	1.9697	12875	1229	1145	2374	688845	646901	820055	860623	3016424	0.25	0.23	0.24	0.27	0.52	0.866	0.2857	0.7682	1.9317	0	1199966	1454822	977140	989600	10000	4631528	0.25	0.36	0.2	0.19	0.39	0.87	0.3132	0.7468	1.9115	0	303	261	564	157788	177978	144176	141881	621823	0.26	0.27	0.23	0.24	0	0.47	0.8775	0.27	0.7786	1.943	557	147889	175057	115542	116315	0	554803	0.26	0.36	0.2	0.18	0	0.38	0.8687	0.3263	0.7395	1.9047	9	18	27	367	486	509	662	2024	0.18	0.24	0.25	0.33	0.58	0.8757	0.3031	0.7479	1.9545	3	0	3	911	780	903	1104	3698	0.25	0.23	0.24	0.28	0	0.52	0.9043	0.1095	0.8982	1.9948	23549	27583	6598	10599	17777	31517	18543	12714	18227	16921	13323	18373	14279	11185	9477	15998	12954	22496	21501	12098	24282	12521	26406	19981	21313	14696	7725	14872	9201	15916	18015	14538	18279	8587	12910	24052	14370	13991	13831	31249	17549	18531	14995	28497	16574	13567	16438	13308	8890	12540	12623	26848	6100	12885	16492	14916	3205	15043	19193	7006	14979	3368	9308	7258
GCF_016808335.1	NC_053140	NC_053140.1	Panicum virgatum strain AP13 chromosome 5K; P.virgatum_v5; whole genome shotgun sequence.	16441730	16442710	14699403	14682634	120000	62386477	0.26	0.26	0.24	0.24	0	0.47	0.9551	0.0006	0.9994	1.9966	2392	2267	4659	4383803	4947967	4161963	4225561	0	17719294	0.24	0.27	0.25	0.25	0.5	0.9126	0.1333	0.8795	1.9726	29886	1982	1880	3862	1151054	1073376	1349768	1424558	4998756	0.25	0.23	0.24	0.27	0.51	0.8665	0.2844	0.7686	1.9332	0	1993364	2432481	1634265	1659431	0	7719541	0.25	0.36	0.2	0.19	0.39	0.8712	0.3067	0.7513	1.9139	0	352	335	687	183779	209142	174569	171458	738948	0.25	0.27	0.24	0.24	0	0.48	0.8764	0.2693	0.7776	1.9431	0	163201	200028	127313	123532	0	614074	0.25	0.37	0.2	0.18	0	0.38	0.8676	0.3371	0.7312	1.9049	29	36	65	946	1120	1236	1552	4854	0.19	0.23	0.25	0.32	0.57	0.8912	0.2262	0.8035	1.9649	2	0	2	72	75	79	86	312	0.23	0.24	0.25	0.28	0	0.53	0.8809	0.0629	0.9393	1.9965	38707	47114	11088	17440	29972	53008	30398	21243	30513	28107	21597	31018	24220	18461	15961	26425	21634	37106	35974	20116	40806	20812	42741	32705	35511	24337	12818	24968	15122	26249	29161	24358	30176	14614	21476	39443	23836	23503	23019	50966	29716	30010	25297	46044	27316	22232	27337	23130	14910	20459	21195	43172	10243	21060	27985	24215	5499	24294	30989	10983	24799	5946	15783	11891
GCF_016808335.1	NC_053141	NC_053141.1	Panicum virgatum strain AP13 chromosome 6K; P.virgatum_v5; whole genome shotgun sequence.	12831999	12863561	11267685	11273189	251119	48487553	0.26	0.27	0.23	0.23	0.01	0.46	0.9523	0.0015	0.9985	1.994	1382	1288	2670	2588950	2869829	2434145	2465016	30000	10387940	0.24	0.27	0.25	0.25	0.5	0.9107	0.1379	0.8758	1.9707	12864	1088	989	2077	599214	556729	712479	747246	2615668	0.25	0.23	0.25	0.27	0.52	0.8665	0.2851	0.7683	1.9314	0	1108975	1311600	927909	935097	20000	4303581	0.26	0.36	0.2	0.19	0.39	0.8706	0.304	0.7533	1.9138	0	269	268	537	155210	174587	139121	139626	608544	0.26	0.27	0.23	0.24	0	0.47	0.8758	0.2718	0.7758	1.9421	5	165801	194895	135169	133433	0	629298	0.26	0.36	0.2	0.18	0	0.38	0.8705	0.3204	0.7423	1.9077	21	17	38	570	664	704	895	2833	0.2	0.23	0.25	0.32	0.57	0.8884	0.2306	0.8013	1.9697	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20705	24616	5638	9044	15610	28404	16005	10850	15629	14698	11323	15949	12179	9279	7900	14128	10940	19274	18831	10274	21288	10841	23074	17290	18776	12970	6638	12955	7828	13541	16035	12136	16039	7297	11002	21586	12771	12352	11959	27829	15462	16017	12820	24981	14204	11482	14054	11451	7572	10809	10640	22938	5171	11367	14402	12336	2941	12850	16227	5861	13311	3022	7991	6093
GCF_016808335.1	NC_053142	NC_053142.1	Panicum virgatum strain AP13 chromosome 7K; P.virgatum_v5; whole genome shotgun sequence.	13927305	13886041	12302642	12302709	490000	52908697	0.26	0.26	0.23	0.23	0.01	0.47	0.9473	0.0015	0.9985	1.9921	1590	1570	3160	2943545	3288688	2781633	2814287	0	11828153	0.24	0.27	0.25	0.25	0.5	0.9121	0.134	0.8791	1.9729	9927	1255	1270	2525	732200	685561	865335	914491	3197587	0.25	0.23	0.24	0.27	0.52	0.8672	0.282	0.7707	1.9336	0	1294166	1546137	1064959	1060674	0	4965936	0.25	0.36	0.2	0.19	0.39	0.8714	0.3019	0.7548	1.9149	0	287	259	546	147060	164583	134194	134856	580693	0.26	0.27	0.23	0.24	0	0.47	0.8766	0.2678	0.7794	1.946	0	167921	198766	139844	141717	0	648248	0.26	0.36	0.2	0.18	0	0.38	0.8701	0.3095	0.7495	1.9101	20	23	43	641	757	805	1001	3204	0.2	0.24	0.25	0.31	0.57	0.8846	0.2404	0.7938	1.9679	14	8	22	6007	5605	5939	7141	24692	0.24	0.23	0.24	0.28	0	0.52	0.8997	0.0997	0.9074	1.9931	24681	30007	7086	11467	19616	34333	19888	13790	19357	18051	13759	19824	15247	12092	9852	17033	13944	23670	22593	12554	26313	13422	26973	20997	22744	15785	8418	16029	9418	16918	18912	15390	19539	9047	13669	24962	15263	14512	14492	32764	19074	19036	15753	30031	17481	14586	17264	14140	9514	13187	14442	27807	6405	13760	17963	15492	3346	15423	19912	7486	15777	3446	9305	7595
GCF_016808335.1	NC_053143	NC_053143.1	Panicum virgatum strain AP13 chromosome 8K; P.virgatum_v5; whole genome shotgun sequence.	15071374	15046021	12849001	12843701	230000	56040097	0.27	0.27	0.23	0.23	0	0.46	0.9525	0.001	0.999	1.9932	1332	1315	2647	2611347	2819993	2328946	2351033	10000	10121319	0.25	0.27	0.24	0.24	0.48	0.9117	0.1348	0.8787	1.973	4050	988	991	1979	603792	559359	658546	697580	2519277	0.26	0.23	0.24	0.27	0.51	0.8695	0.2781	0.7733	1.9357	1	1134532	1278195	899631	896791	0	4209149	0.26	0.36	0.19	0.18	0.38	0.8702	0.2894	0.7643	1.9116	0	315	297	612	165355	187324	150838	152547	656064	0.26	0.27	0.23	0.24	0	0.47	0.8762	0.2709	0.776	1.9457	4	153742	187362	119699	116900	0	577703	0.26	0.37	0.19	0.18	0	0.37	0.8679	0.3212	0.7429	1.9031	19	11	30	446	568	541	678	2233	0.2	0.26	0.24	0.3	0.54	0.8897	0.2562	0.7835	1.9713	1	0	1	38	38	36	44	156	0.24	0.24	0.23	0.28	0	0.51	0.8747	0.1	0.9091	1.9958	20221	23940	5896	9413	15550	26152	15192	11881	14238	14409	12385	16744	12008	8618	8371	14074	11156	18316	17064	11012	19769	10827	20556	17518	17437	12210	7812	14128	8409	13880	15315	13521	14712	8079	11535	19647	12025	10349	11296	23500	14875	13168	13699	21394	13726	11335	12760	11658	8422	11679	9488	18014	5805	11320	13630	12765	2886	11309	13456	5826	14120	3034	7965	6153
GCF_016808335.1	NC_053144	NC_053144.1	Panicum virgatum strain AP13 chromosome 9K; P.virgatum_v5; whole genome shotgun sequence.	18718412	18721777	16715475	16707356	200000	71063020	0.26	0.26	0.24	0.24	0	0.47	0.9535	0.0003	0.9997	1.9961	2708	2709	5417	5196022	5886487	4910435	5023402	0	21016346	0.24	0.27	0.25	0.25	0.5	0.9125	0.1343	0.8787	1.9718	23817	2283	2310	4593	1397818	1297192	1614710	1729214	6038934	0.25	0.23	0.24	0.27	0.51	0.8664	0.2863	0.7671	1.9332	0	2403406	2961645	1966721	1996984	0	9328756	0.25	0.36	0.2	0.19	0.39	0.8707	0.3127	0.7474	1.9119	0	372	345	717	218978	246402	195431	195986	856797	0.26	0.27	0.23	0.24	0	0.47	0.8772	0.2662	0.78	1.944	0	175467	212080	146087	142866	0	676500	0.26	0.37	0.19	0.18	0	0.38	0.8676	0.3303	0.736	1.9029	34	38	72	1052	1223	1370	1698	5343	0.2	0.23	0.26	0.32	0.58	0.882	0.2377	0.7963	1.9651	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	46919	58094	13030	21216	36310	66601	37799	26274	35953	33335	27279	38764	28762	21843	19331	31723	26471	44542	42794	24570	49008	25801	50589	41062	44063	28542	15156	30135	18772	31655	35577	29336	36077	17294	25393	48406	28330	27455	27080	61787	35153	35615	31041	55806	31943	27787	33036	27967	17680	24562	25447	52888	12391	25476	34056	28358	6240	28770	36665	13389	29840	6748	18938	13941
GCF_016808335.1	NC_053145	NC_053145.1	Panicum virgatum strain AP13 chromosome 1N; P.virgatum_v5; whole genome shotgun sequence.	17728886	17725783	15635677	15641315	270000	67001661	0.26	0.26	0.23	0.23	0	0.47	0.9543	0.0003	0.9997	1.9949	1938	1912	3850	3695011	4152906	3427053	3485211	0	14760181	0.24	0.27	0.25	0.25	0.5	0.9111	0.1376	0.876	1.9713	12761	1526	1531	3057	926517	850966	1040799	1114466	3932748	0.26	0.23	0.24	0.27	0.51	0.867	0.293	0.7624	1.9335	0	1686875	2043802	1366052	1369555	0	6466284	0.25	0.36	0.19	0.19	0.38	0.8707	0.3092	0.7496	1.9113	0	375	340	715	181417	205065	168187	165909	720578	0.26	0.27	0.24	0.24	0	0.48	0.8753	0.2687	0.7778	1.9432	5	203027	235425	165448	168071	0	771971	0.26	0.36	0.2	0.19	0	0.38	0.8712	0.3253	0.7399	1.9081	26	21	47	676	820	890	1111	3497	0.19	0.23	0.25	0.32	0.57	0.8857	0.256	0.7806	1.9669	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	31004	38765	8817	14156	23963	43901	24806	17847	23278	21405	18346	26443	19443	13589	12696	21092	17733	28461	26599	16079	31242	16711	32402	27452	28349	18777	10245	20566	12213	20854	22830	19574	22645	11719	16952	30973	18231	17532	17227	38366	22831	22430	20880	34711	20726	18240	20926	18347	11915	16451	16087	32758	8733	17055	21811	19307	4127	18079	23300	8763	20249	4423	12256	9190
GCF_016808335.1	NC_053146	NC_053146.1	Panicum virgatum strain AP13 chromosome 2N; P.virgatum_v5; whole genome shotgun sequence.	18658739	18613006	16442646	16402055	210000	70326446	0.27	0.26	0.23	0.23	0	0.47	0.9513	0.0025	0.9975	1.9955	2113	2109	4222	3966819	4464017	3719991	3789400	20000	15960227	0.24	0.27	0.25	0.25	0.5	0.9116	0.136	0.8774	1.9717	26326	1716	1722	3438	1022782	954425	1176372	1246655	4400234	0.25	0.23	0.24	0.27	0.51	0.8666	0.2866	0.7669	1.9332	8	1799808	2190232	1488449	1500891	20000	6999380	0.25	0.36	0.2	0.19	0.39	0.8713	0.3067	0.7513	1.9126	8063	352	350	702	198028	219806	178439	179782	776055	0.26	0.27	0.23	0.24	0	0.47	0.8772	0.2625	0.7817	1.9441	0	167246	199287	132494	132686	0	631713	0.26	0.37	0.19	0.18	0	0.37	0.8697	0.3177	0.7451	1.9042	25	22	47	661	826	895	1114	3496	0.19	0.24	0.26	0.32	0.58	0.8817	0.262	0.7769	1.9628	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	34412	42064	9923	15545	26836	46943	27294	19504	26327	24720	20008	28215	21633	15756	14235	23385	19114	32428	31115	18197	36040	18537	36781	29722	31515	21353	11689	22625	13785	23179	25451	21912	25828	12945	18933	34524	20897	19911	19429	43744	25641	25287	22859	39658	23826	20613	23353	20144	13423	18208	18467	36533	9223	19128	24579	21978	4673	20629	26949	10003	22047	5104	13617	10105
GCF_016808335.1	NC_053147	NC_053147.1	Panicum virgatum strain AP13 chromosome 3N; P.virgatum_v5; whole genome shotgun sequence.	18600734	18592836	16324478	16288245	230000	70036293	0.27	0.27	0.23	0.23	0	0.47	0.9515	0.0013	0.9987	1.9951	2124	2113	4237	3976936	4471762	3727741	3779021	0	15955460	0.24	0.27	0.25	0.25	0.5	0.9117	0.1384	0.8752	1.9723	15064	1730	1707	3437	1017207	937000	1171447	1242970	4368624	0.25	0.23	0.24	0.27	0.51	0.8664	0.2909	0.7643	1.9332	0	1760771	2152478	1439819	1449208	0	6802276	0.25	0.36	0.2	0.19	0.38	0.8701	0.3105	0.7484	1.9118	0	347	358	705	186947	209935	172783	172350	742015	0.26	0.27	0.23	0.24	0	0.47	0.877	0.2609	0.7837	1.9465	7	207783	238327	166006	163619	0	775735	0.26	0.36	0.2	0.19	0	0.38	0.872	0.3202	0.7436	1.9087	30	31	61	870	1071	1165	1416	4522	0.19	0.24	0.26	0.31	0.57	0.8896	0.2491	0.787	1.9649	1	0	1	463	456	399	500	1818	0.25	0.25	0.22	0.28	0	0.49	0.929	0.12	0.8914	1.9954	34259	42105	9462	15160	26373	47443	26934	18689	26156	24217	19594	28190	20897	15843	13924	23569	19029	32349	30610	17696	35722	18466	36605	29216	31090	21187	11223	21832	13002	22821	25989	21211	26184	12664	18746	34917	20762	19966	19847	43715	26376	25323	22505	40134	23294	19663	23355	20066	12921	18716	18337	36675	8885	18788	24778	21561	4754	20956	26354	9723	22353	5021	13502	10154
GCF_016808335.1	NC_053148	NC_053148.1	Panicum virgatum strain AP13 chromosome 4N; P.virgatum_v5; whole genome shotgun sequence.	13430115	13432121	11850674	11817872	150000	50680782	0.26	0.27	0.23	0.23	0	0.47	0.9544	0.0015	0.9985	1.9955	1406	1393	2799	2693060	3013072	2553019	2597255	0	10856406	0.23	0.26	0.25	0.25	0.5	0.9103	0.1368	0.8767	1.9706	12821	1127	1144	2271	667547	624322	783184	825351	2900404	0.25	0.23	0.24	0.27	0.51	0.866	0.2855	0.7682	1.9322	0	1207122	1449968	1007245	1016736	0	4681071	0.25	0.36	0.2	0.19	0.39	0.8708	0.3094	0.7495	1.9132	0	260	237	497	129981	148252	118584	118392	515209	0.25	0.27	0.23	0.24	0	0.47	0.877	0.2697	0.7784	1.945	33	159074	176801	128339	131351	0	595565	0.26	0.36	0.19	0.19	0	0.38	0.8687	0.3208	0.743	1.9034	10	8	18	253	322	332	438	1345	0.19	0.24	0.25	0.33	0.57	0.8797	0.2965	0.7513	1.9607	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	22649	27257	6342	10285	17142	30618	17964	12518	17566	16222	13068	18044	13724	10877	9094	15865	12541	21886	20886	11612	23398	12408	25103	19448	20657	14399	7531	14418	8853	14956	17299	14127	17591	8302	12448	23479	13739	13272	13628	29418	16637	16937	14482	27042	15490	13173	15953	12925	8443	12073	12095	25499	5896	12293	15734	14089	2951	13888	17904	6611	14526	3142	8853	6754
GCF_016808335.1	NC_053149	NC_053149.1	Panicum virgatum strain AP13 chromosome 5N; P.virgatum_v5; whole genome shotgun sequence.	19076581	19078762	16957179	16955229	220000	72287751	0.26	0.26	0.23	0.23	0	0.47	0.9518	0.0001	0.9999	1.9958	2336	2271	4607	4417621	4970802	4170786	4216535	10000	17785744	0.24	0.27	0.25	0.25	0.5	0.9122	0.1349	0.8781	1.9722	17408	1942	1852	3794	1124140	1046198	1302821	1378280	4851439	0.25	0.23	0.24	0.27	0.51	0.8666	0.287	0.7668	1.9333	653	2048828	2484288	1690692	1691759	10000	7925567	0.25	0.36	0.2	0.19	0.39	0.8712	0.3076	0.7505	1.9138	192	344	374	718	197760	222820	182076	182032	784688	0.26	0.27	0.23	0.24	0	0.47	0.8755	0.2701	0.7779	1.9434	0	173993	209065	143304	141671	0	668033	0.26	0.36	0.2	0.18	0	0.38	0.8688	0.324	0.7396	1.9053	27	31	58	863	1007	1093	1374	4337	0.2	0.23	0.25	0.32	0.57	0.885	0.2427	0.7938	1.9629	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	37710	45729	10805	17432	29428	51367	30164	20810	29367	27350	21274	30583	23625	17472	15581	25412	21135	35942	34480	19812	38772	20668	39949	32289	34996	23780	12376	24573	14969	25962	28227	23681	28995	14458	21205	37763	23165	22779	22085	48102	28295	28770	24785	43503	26150	22135	26332	22522	14610	20179	20401	40730	9999	21244	27190	23757	5380	23192	30017	11148	24629	5807	15190	11928
GCF_016808335.1	NC_053150	NC_053150.1	Panicum virgatum strain AP13 chromosome 6N; P.virgatum_v5; whole genome shotgun sequence.	14165825	14246722	12379126	12403134	270000	53464807	0.26	0.27	0.23	0.23	0.01	0.46	0.9522	0.0038	0.9962	1.9938	1359	1237	2596	2511745	2785919	2368749	2388003	0	10054416	0.24	0.27	0.25	0.25	0.5	0.9105	0.1419	0.8725	1.9704	7529	1070	969	2039	583724	539397	680378	714720	2518219	0.25	0.23	0.24	0.27	0.52	0.8665	0.2885	0.766	1.9323	0	1130501	1330471	953425	946801	0	4361198	0.25	0.36	0.2	0.19	0.39	0.8702	0.3051	0.7525	1.9126	0	267	252	519	145160	165752	134994	133623	579529	0.25	0.27	0.24	0.24	0	0.48	0.8759	0.2662	0.7789	1.9462	0	138801	168018	112416	111439	0	530674	0.25	0.37	0.2	0.18	0	0.38	0.8686	0.3288	0.7371	1.9054	15	12	27	381	471	512	628	1992	0.19	0.24	0.26	0.32	0.57	0.8893	0.2378	0.7951	1.9676	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20299	24433	5591	8794	15049	27369	15532	10602	14890	14034	11064	15634	11716	8627	7762	13625	10482	18485	17926	10088	20341	10557	21835	17005	18333	12742	6539	12765	7712	13132	15601	11949	15490	7061	10752	20576	12200	11815	11443	26123	14707	14727	12657	23392	13379	11256	13313	11290	7244	10678	10170	20953	4999	11180	13976	12107	2846	11820	15285	5697	13013	2923	7684	5804
GCF_016808335.1	NC_053151	NC_053151.1	Panicum virgatum strain AP13 chromosome 7N; P.virgatum_v5; whole genome shotgun sequence.	13470437	13459395	11978801	11982605	250000	51141238	0.26	0.26	0.23	0.23	0	0.47	0.948	0.0006	0.9994	1.9948	1631	1534	3165	2914287	3238223	2744961	2786629	0	11684100	0.24	0.26	0.25	0.25	0.5	0.9114	0.1344	0.8788	1.9716	15242	1273	1203	2476	710234	663742	824966	875801	3074743	0.25	0.23	0.24	0.27	0.52	0.8671	0.284	0.7694	1.9336	0	1245447	1492607	1035028	1036550	0	4809632	0.25	0.36	0.2	0.19	0.39	0.8717	0.3038	0.7535	1.9151	0	279	241	520	141690	156071	127656	127406	552823	0.26	0.27	0.23	0.24	0	0.47	0.8757	0.275	0.7756	1.9415	0	176359	203208	142875	142635	0	665077	0.26	0.37	0.2	0.18	0	0.38	0.8711	0.3158	0.7458	1.9079	18	21	39	561	663	720	916	2860	0.2	0.23	0.25	0.32	0.57	0.8854	0.2622	0.7779	1.9625	53	56	109	33907	30604	34472	41429	140412	0.24	0.23	0.25	0.28	0	0.53	0.9023	0.1019	0.9058	1.9916	23780	28567	6836	11114	18740	32501	18998	13259	18682	17450	13297	19686	14950	11423	9900	16235	13436	22705	21611	12339	25041	12936	25229	20396	21867	15091	8171	15607	9293	16485	18076	14933	18445	8934	13387	23971	14539	13826	13827	30718	18024	18191	15684	27859	17168	14134	16582	14099	9535	12909	13657	26018	6398	13168	17236	14635	3335	14719	19027	7171	15413	3578	9631	7307
GCF_016808335.1	NC_053152	NC_053152.1	Panicum virgatum strain AP13 chromosome 8N; P.virgatum_v5; whole genome shotgun sequence.	13744218	13734347	11668651	11672320	250000	51069536	0.27	0.27	0.23	0.23	0	0.46	0.9513	0.0005	0.9995	1.9925	1162	1110	2272	2307383	2487758	2056520	2087463	10000	8949124	0.24	0.27	0.24	0.25	0.49	0.91	0.1368	0.8771	1.9721	20732	831	813	1644	515140	476403	559244	595779	2146566	0.26	0.23	0.24	0.27	0.51	0.8698	0.2779	0.7738	1.936	0	975907	1103717	783711	787879	10000	3661214	0.26	0.36	0.19	0.19	0.38	0.8698	0.2944	0.7604	1.9099	0	245	276	521	128295	145036	118100	116601	508032	0.26	0.27	0.23	0.24	0	0.47	0.8744	0.2745	0.7743	1.9417	6	151610	177055	121672	120211	0	570548	0.26	0.37	0.2	0.18	0	0.38	0.8707	0.3206	0.7437	1.905	11	12	23	339	409	416	535	1699	0.2	0.24	0.24	0.32	0.56	0.8859	0.2523	0.7877	1.9685	67	0	67	1949	1746	2011	2273	7979	0.24	0.22	0.25	0.28	0	0.54	0.8927	0.1161	0.8904	1.9935	17204	20812	5084	8010	12943	22474	12896	10159	12142	12301	10541	14540	10319	7428	7350	11910	9520	15500	14685	9462	16822	9245	17374	15060	14915	10390	6566	11943	7096	11458	13116	11261	12677	6982	9781	16954	9983	8929	9854	19853	12761	11134	11861	18361	11838	9890	10774	10051	7153	9768	8100	15703	4879	9240	11668	10714	2425	9613	11606	4813	11537	2538	6565	5181
GCF_016808335.1	NC_053153	NC_053153.1	Panicum virgatum strain AP13 chromosome 9N; P.virgatum_v5; whole genome shotgun sequence.	21933265	21900914	19525416	19495986	240000	83095581	0.26	0.26	0.23	0.23	0	0.47	0.9522	0.0015	0.9985	1.996	2671	2791	5462	5258043	5927853	4963571	5070121	10000	21229588	0.24	0.27	0.25	0.25	0.5	0.9123	0.1353	0.8778	1.9728	52172	2245	2302	4547	1382009	1278378	1575358	1689736	5925481	0.25	0.23	0.24	0.27	0.51	0.8664	0.2866	0.7668	1.9334	4	2402199	2947903	1977789	2000323	10000	9338214	0.25	0.36	0.2	0.19	0.39	0.8712	0.312	0.7479	1.9131	0	373	437	810	221839	248402	206183	205650	882074	0.25	0.27	0.23	0.24	0	0.48	0.876	0.2747	0.7742	1.9437	101	215997	253294	177404	174901	10000	831596	0.26	0.37	0.2	0.18	0	0.38	0.8678	0.3274	0.7395	1.9025	31	36	67	984	1170	1264	1571	4989	0.2	0.23	0.25	0.32	0.57	0.8828	0.2359	0.7982	1.9661	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	46409	57839	13132	21097	36087	65362	38102	25817	35070	32628	27087	38659	28525	21304	19394	31312	25956	43506	41868	24194	47360	25890	48973	40617	43139	28236	15089	30043	18391	31252	34966	29098	34942	16913	25218	46909	27861	26710	26341	59066	34436	34148	30907	53363	31166	27717	31886	27335	17559	24543	24603	50477	12237	25023	33217	28148	6291	27769	35202	13471	29906	6726	18908	13805
NA	NC_015990	NC_015990.1	Panicum virgatum chloroplast; complete genome.	43025	42705	26883	27006	0	139619	0.31	0.31	0.19	0.19	0	0.39	0.9373	0.006	0.994	1.9621	61	72	133	25976	25605	16465	19592	0	87638	0.28	0.29	0.19	0.23	0.43	0.8948	0.2284	0.8033	1.9533	67	37	44	81	16981	17822	10475	12025	57303	0.3	0.31	0.18	0.21	0.39	0.8876	0.2708	0.7788	1.9288	67	1829	1620	850	1034	0	5333	0.34	0.3	0.16	0.19	0.35	0.9037	0.1388	0.7521	1.9282	0	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	19	21	40	661	748	698	873	2980	0.22	0.25	0.23	0.29	0.53	0.8712	0.2509	0.7901	1.9669	4	4	8	2410	1742	2152	2878	9182	0.27	0.21	0.22	0.3	0	0.52	0.9095	0.3015	0.7451	1.9756	446	272	411	421	346	258	532	776	281	334	558	763	226	129	280	202	368	153	398	693	114	433	150	537	150	198	301	385	542	561	302	448	130	477	276	150	116	171	138	180	110	99	693	149	58	417	260	334	158	329	125	131	668	322	119	222	20	90	86	272	502	45	27	256