Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_000801105.2 | NC_079511 | NC_079511.1 | Raphanus sativus cultivar WK10039 chromosome 1; ASM80110v3; whole genome shotgun sequence. | 8464354 | 8448136 | 4673568 | 4675084 | 18200 | 26279342 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.36 | 0.948 | 0.0011 | 0.9989 | 1.939 | 2033 | 2040 | 4073 | 2782519 | 3081584 | 1858467 | 2021992 | 3000 | 9747562 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.9095 | 0.1589 | 0.8588 | 1.9614 | 10329 | 1691 | 1682 | 3373 | 1200451 | 1108223 | 922077 | 1064715 | 0 | 4295466 | 0.28 | 0.26 | 0.21 | 0.24 | 0 | 0.45 | 0.8748 | 0.3007 | 0.7571 | 1.9573 | 0 | 714787 | 976939 | 401600 | 417605 | 1800 | 2512731 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8467 | 0.3993 | 0.6895 | 1.8498 | 0 | 236 | 241 | 477 | 125802 | 135231 | 80816 | 87012 | 0 | 428861 | 0.29 | 0.3 | 0.19 | 0.21 | 0 | 0.41 | 0.8748 | 0.2942 | 0.7613 | 1.9388 | 520 | 84082 | 104935 | 45767 | 46291 | 0 | 281075 | 0.27 | 0.41 | 0.16 | 0.17 | 0 | 0.33 | 0.8519 | 0.3837 | 0.7002 | 1.8586 | 0 | 45 | 36 | 81 | 1118 | 1432 | 1496 | 1913 | 0 | 5959 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8893 | 0.2725 | 0.7685 | 1.9637 | 0 | 0 | 1 | 1 | 28 | 27 | 31 | 33 | 0 | 119 | 0.24 | 0.23 | 0.26 | 0.28 | 0 | 0.54 | 0.8929 | 0.0494 | 0.9518 | 1.9954 | 0 | 34871 | 46261 | 13148 | 22129 | 21222 | 45248 | 32469 | 23034 | 20593 | 22620 | 23619 | 42065 | 26151 | 14178 | 19452 | 30864 | 32858 | 25681 | 30687 | 26664 | 21212 | 25134 | 27386 | 40781 | 24602 | 16760 | 15368 | 29894 | 18141 | 30772 | 26725 | 29884 | 19864 | 16880 | 22362 | 24733 | 15365 | 9444 | 19097 | 15054 | 20784 | 7760 | 37499 | 14189 | 15569 | 32277 | 15438 | 33279 | 17464 | 19763 | 14867 | 13409 | 15996 | 23123 | 20550 | 20896 | 5936 | 9179 | 12403 | 12437 | 28475 | 7313 | 14278 | 11317 |
GCF_000801105.2 | NC_079512 | NC_079512.1 | Raphanus sativus cultivar WK10039 chromosome 2; ASM80110v3; whole genome shotgun sequence. | 13261386 | 13254695 | 7079074 | 7081664 | 25202 | 40702021 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.35 | 0.9444 | 0.0004 | 0.9996 | 1.9321 | 3093 | 3170 | 6263 | 4188405 | 4639583 | 2767591 | 3004595 | 3501 | 14603675 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.9089 | 0.1598 | 0.8581 | 1.9604 | 15884 | 2599 | 2657 | 5256 | 1823818 | 1691251 | 1415084 | 1619087 | 6 | 6549246 | 0.28 | 0.26 | 0.21 | 0.24 | 0 | 0.45 | 0.8751 | 0.2975 | 0.7596 | 1.9574 | 2 | 1074937 | 1464614 | 576860 | 606929 | 1394 | 3724734 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8457 | 0.3993 | 0.6895 | 1.8467 | 0 | 335 | 344 | 679 | 176815 | 193702 | 118291 | 122412 | 0 | 611220 | 0.29 | 0.3 | 0.2 | 0.21 | 0 | 0.41 | 0.8753 | 0.2896 | 0.7641 | 1.9398 | 65 | 101322 | 133568 | 55240 | 55323 | 0 | 345453 | 0.26 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8474 | 0.4091 | 0.684 | 1.8485 | 0 | 64 | 65 | 129 | 1858 | 2280 | 2420 | 3054 | 0 | 9612 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8872 | 0.2589 | 0.7807 | 1.9642 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 53285 | 71460 | 19979 | 33275 | 32635 | 67289 | 48605 | 34476 | 31778 | 35330 | 35460 | 62335 | 40194 | 21847 | 29165 | 46044 | 49992 | 38987 | 47232 | 41069 | 31815 | 38035 | 42823 | 60171 | 37348 | 26151 | 23893 | 45462 | 26722 | 46467 | 41026 | 46106 | 30678 | 26515 | 34470 | 37379 | 24160 | 14724 | 29297 | 23379 | 31396 | 12060 | 56451 | 21709 | 24134 | 48379 | 23474 | 50879 | 27353 | 30245 | 23029 | 20528 | 24760 | 34925 | 31452 | 31705 | 9586 | 14168 | 19831 | 18598 | 43284 | 11627 | 22547 | 17314 |
GCF_000801105.2 | NC_079513 | NC_079513.1 | Raphanus sativus cultivar WK10039 chromosome 3; ASM80110v3; whole genome shotgun sequence. | 9206486 | 9228435 | 4952965 | 4986139 | 41202 | 28415227 | 0.32 | 0.32 | 0.17 | 0.18 | 0 | 0.35 | 0.9435 | 0.0045 | 0.9955 | 1.9336 | 2137 | 2031 | 4168 | 2696134 | 3007332 | 1786987 | 1943404 | 3600 | 9437457 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.9084 | 0.1647 | 0.854 | 1.96 | 9014 | 1738 | 1670 | 3408 | 1160289 | 1081120 | 891977 | 1023360 | 1 | 4156747 | 0.28 | 0.26 | 0.21 | 0.24 | 0 | 0.45 | 0.875 | 0.3002 | 0.7579 | 1.9567 | 0 | 696826 | 954794 | 379848 | 402088 | 2399 | 2435955 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8462 | 0.4025 | 0.6873 | 1.8482 | 0 | 274 | 245 | 519 | 127927 | 137419 | 83086 | 89927 | 0 | 438359 | 0.29 | 0.3 | 0.19 | 0.21 | 0 | 0.41 | 0.8741 | 0.2941 | 0.761 | 1.9397 | 31 | 73413 | 95958 | 41373 | 41817 | 100 | 252661 | 0.26 | 0.41 | 0.16 | 0.17 | 0 | 0.32 | 0.8499 | 0.4079 | 0.6833 | 1.8525 | 0 | 53 | 54 | 107 | 1505 | 1897 | 1984 | 2518 | 0 | 7904 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8849 | 0.2767 | 0.7688 | 1.9621 | 0 | 0 | 2 | 2 | 854 | 733 | 868 | 1088 | 0 | 3543 | 0.23 | 0.22 | 0.26 | 0.3 | 0 | 0.55 | 0.8992 | 0.1098 | 0.8995 | 1.9884 | 0 | 33704 | 44674 | 12636 | 21347 | 20620 | 42900 | 30678 | 22898 | 20081 | 23238 | 23098 | 40218 | 25448 | 13290 | 18678 | 28791 | 32354 | 24423 | 29640 | 26518 | 19885 | 24161 | 26534 | 39612 | 23330 | 16264 | 15082 | 29155 | 17932 | 29672 | 26044 | 28843 | 19062 | 16688 | 21856 | 23838 | 15322 | 9346 | 18111 | 14291 | 19548 | 7521 | 36394 | 13701 | 15238 | 31226 | 14636 | 31701 | 17575 | 19813 | 13877 | 12201 | 15864 | 22755 | 19710 | 20787 | 5752 | 8713 | 12072 | 12071 | 27519 | 7108 | 14176 | 11130 |
GCF_000801105.2 | NC_079514 | NC_079514.1 | Raphanus sativus cultivar WK10039 chromosome 4; ASM80110v3; whole genome shotgun sequence. | 16931299 | 16927071 | 9161850 | 9137767 | 44215 | 52202202 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.35 | 0.9472 | 0.0014 | 0.9986 | 1.9344 | 3733 | 3860 | 7593 | 5036047 | 5569213 | 3306657 | 3586088 | 4900 | 17502905 | 0.28 | 0.31 | 0.19 | 0.21 | 0 | 0.41 | 0.9081 | 0.1599 | 0.858 | 1.9593 | 54950 | 3075 | 3186 | 6261 | 2154482 | 2001019 | 1658681 | 1896347 | 7 | 7710536 | 0.28 | 0.26 | 0.21 | 0.24 | 0 | 0.45 | 0.8747 | 0.3015 | 0.7571 | 1.9562 | 6 | 1279740 | 1719035 | 674883 | 710717 | 2793 | 4387168 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8446 | 0.4018 | 0.6884 | 1.844 | 0 | 453 | 441 | 894 | 252927 | 275747 | 165433 | 176325 | 0 | 870432 | 0.29 | 0.3 | 0.19 | 0.21 | 0 | 0.4 | 0.8745 | 0.301 | 0.7559 | 1.9366 | 0 | 161195 | 204973 | 88111 | 89458 | 100 | 543837 | 0.26 | 0.41 | 0.16 | 0.16 | 0 | 0.33 | 0.8474 | 0.4066 | 0.6849 | 1.8511 | 0 | 79 | 99 | 178 | 2602 | 3130 | 3291 | 4146 | 0 | 13169 | 0.2 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8812 | 0.2574 | 0.7825 | 1.9647 | 0 | 0 | 33 | 33 | 888 | 809 | 1095 | 1143 | 0 | 3935 | 0.23 | 0.21 | 0.28 | 0.29 | 0 | 0.57 | 0.8956 | 0.0756 | 0.9284 | 1.9841 | 0 | 62034 | 82384 | 23623 | 39348 | 38211 | 78854 | 57138 | 41537 | 36864 | 41817 | 42576 | 74576 | 47698 | 25878 | 35352 | 54663 | 59657 | 45673 | 55603 | 49271 | 36132 | 44634 | 50315 | 71629 | 43019 | 30214 | 28339 | 53940 | 32337 | 55285 | 48822 | 53773 | 35180 | 31495 | 40813 | 43764 | 28261 | 17034 | 34642 | 26686 | 36441 | 14141 | 67511 | 24950 | 28391 | 57267 | 27453 | 59345 | 32543 | 35612 | 26891 | 23602 | 29655 | 41288 | 36439 | 37825 | 10887 | 16222 | 23091 | 22174 | 51519 | 13614 | 26184 | 20568 |
GCF_000801105.2 | NC_079515 | NC_079515.1 | Raphanus sativus cultivar WK10039 chromosome 5; ASM80110v3; whole genome shotgun sequence. | 12968352 | 12963791 | 7002478 | 6995377 | 27001 | 39956999 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.35 | 0.9465 | 0.0007 | 0.9993 | 1.9342 | 3423 | 3395 | 6818 | 4572971 | 5121893 | 3053019 | 3323819 | 3401 | 16075103 | 0.28 | 0.31 | 0.19 | 0.21 | 0 | 0.41 | 0.9093 | 0.1603 | 0.8574 | 1.961 | 16936 | 2935 | 2892 | 5827 | 2024599 | 1881649 | 1566400 | 1807829 | 1 | 7280478 | 0.28 | 0.26 | 0.21 | 0.25 | 0 | 0.45 | 0.8745 | 0.2994 | 0.7579 | 1.9578 | 0 | 1232187 | 1709675 | 676227 | 711880 | 2300 | 4332269 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8465 | 0.3985 | 0.6899 | 1.8493 | 0 | 299 | 350 | 649 | 171965 | 186735 | 112654 | 118267 | 0 | 589621 | 0.29 | 0.3 | 0.19 | 0.21 | 0 | 0.41 | 0.8758 | 0.2895 | 0.7644 | 1.9393 | 405 | 84605 | 113160 | 47403 | 48474 | 0 | 293642 | 0.26 | 0.41 | 0.16 | 0.16 | 0 | 0.33 | 0.8502 | 0.4022 | 0.6866 | 1.8556 | 0 | 79 | 67 | 146 | 2046 | 2615 | 2713 | 3457 | 0 | 10831 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8826 | 0.285 | 0.762 | 1.9608 | 0 | 0 | 1 | 1 | 31 | 25 | 31 | 32 | 0 | 119 | 0.26 | 0.21 | 0.26 | 0.27 | 0 | 0.53 | 0.9044 | 0.123 | 0.8876 | 1.9935 | 0 | 59490 | 78899 | 22247 | 37170 | 36244 | 75454 | 55297 | 39672 | 34995 | 39085 | 39104 | 69925 | 44107 | 24621 | 32745 | 51404 | 55884 | 43401 | 52173 | 45248 | 35614 | 42815 | 46815 | 68033 | 41385 | 28853 | 25956 | 50217 | 30163 | 52880 | 46060 | 50943 | 33569 | 29171 | 37415 | 41526 | 26655 | 15912 | 32339 | 25409 | 34973 | 13344 | 62517 | 24372 | 27276 | 54564 | 26451 | 56142 | 30165 | 33464 | 25450 | 23001 | 27170 | 38934 | 34592 | 35103 | 10276 | 15299 | 21889 | 21112 | 47741 | 12140 | 25072 | 19134 |
GCF_000801105.2 | NC_079516 | NC_079516.1 | Raphanus sativus cultivar WK10039 chromosome 6; ASM80110v3; whole genome shotgun sequence. | 17479307 | 17451654 | 9374536 | 9367800 | 36702 | 53709999 | 0.33 | 0.32 | 0.17 | 0.17 | 0 | 0.35 | 0.9452 | 0.0012 | 0.9988 | 1.933 | 3966 | 4044 | 8010 | 5324907 | 5860807 | 3506707 | 3799198 | 4001 | 18495620 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.9082 | 0.1607 | 0.8573 | 1.9599 | 29593 | 3315 | 3373 | 6688 | 2304008 | 2127848 | 1770518 | 2035719 | 0 | 8238093 | 0.28 | 0.26 | 0.21 | 0.24 | 0 | 0.45 | 0.8747 | 0.3002 | 0.7575 | 1.9569 | 6 | 1466445 | 1939103 | 796652 | 828353 | 3001 | 5033554 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8454 | 0.4015 | 0.6884 | 1.8453 | 0 | 456 | 466 | 922 | 246298 | 264464 | 159031 | 165817 | 0 | 835610 | 0.29 | 0.31 | 0.19 | 0.21 | 0 | 0.4 | 0.8739 | 0.2898 | 0.7641 | 1.937 | 77 | 149523 | 189946 | 81087 | 81634 | 0 | 502190 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.847 | 0.4028 | 0.6869 | 1.8485 | 0 | 106 | 95 | 201 | 2837 | 3568 | 3738 | 4704 | 0 | 14847 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8816 | 0.2783 | 0.7657 | 1.9617 | 0 | 2 | 0 | 2 | 69 | 67 | 67 | 72 | 0 | 275 | 0.25 | 0.24 | 0.24 | 0.26 | 0 | 0.5 | 0.8895 | 0.0506 | 0.9508 | 1.9987 | 0 | 67699 | 88959 | 24940 | 42160 | 40398 | 84552 | 61024 | 44417 | 38943 | 45249 | 44869 | 78944 | 50552 | 27541 | 37387 | 58288 | 62246 | 48536 | 59177 | 52148 | 39092 | 48044 | 53136 | 76182 | 46131 | 32699 | 30160 | 57202 | 33969 | 59097 | 52126 | 57387 | 37553 | 33301 | 43538 | 46701 | 30819 | 18308 | 36516 | 29218 | 39269 | 14952 | 71953 | 27268 | 30652 | 61036 | 29638 | 64734 | 34255 | 38681 | 28252 | 25456 | 31228 | 43512 | 39782 | 40172 | 11793 | 17877 | 24427 | 23678 | 55134 | 14420 | 28645 | 21784 |
GCF_000801105.2 | NC_079517 | NC_079517.1 | Raphanus sativus cultivar WK10039 chromosome 7; ASM80110v3; whole genome shotgun sequence. | 8306632 | 8294775 | 4628002 | 4624046 | 15004 | 25868459 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.36 | 0.9482 | 0.0011 | 0.9989 | 1.9406 | 2006 | 1966 | 3972 | 2683526 | 2969115 | 1786966 | 1929820 | 900 | 9370327 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.909 | 0.1599 | 0.8578 | 1.9614 | 5189 | 1698 | 1634 | 3332 | 1160462 | 1074994 | 902814 | 1032384 | 0 | 4170654 | 0.28 | 0.26 | 0.21 | 0.24 | 0 | 0.45 | 0.875 | 0.2966 | 0.7604 | 1.9585 | 4 | 710462 | 963156 | 392132 | 408847 | 800 | 2475397 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8472 | 0.3988 | 0.6899 | 1.8519 | 0 | 209 | 209 | 418 | 103964 | 113426 | 68893 | 70992 | 0 | 357275 | 0.29 | 0.31 | 0.2 | 0.21 | 0 | 0.4 | 0.8726 | 0.2978 | 0.7587 | 1.9367 | 91 | 82454 | 101003 | 45044 | 43092 | 0 | 271593 | 0.26 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8471 | 0.4165 | 0.6789 | 1.8468 | 0 | 37 | 46 | 83 | 1169 | 1484 | 1569 | 1980 | 0 | 6202 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8888 | 0.2634 | 0.7758 | 1.9652 | 0 | 1 | 28 | 29 | 775 | 745 | 991 | 967 | 0 | 3478 | 0.22 | 0.21 | 0.29 | 0.28 | 0 | 0.56 | 0.899 | 0.0629 | 0.9399 | 1.9868 | 0 | 33741 | 44899 | 12593 | 21224 | 20468 | 43596 | 30968 | 22022 | 20495 | 22588 | 22301 | 39881 | 25473 | 14126 | 18478 | 29298 | 31529 | 24907 | 30458 | 25629 | 20569 | 23413 | 27662 | 38877 | 23632 | 16536 | 14789 | 29265 | 16833 | 29315 | 26693 | 29043 | 19611 | 16686 | 21756 | 23977 | 15441 | 9366 | 18832 | 14665 | 20421 | 7789 | 35931 | 13759 | 15441 | 30597 | 15051 | 32544 | 17002 | 19355 | 14883 | 13065 | 15626 | 22371 | 20390 | 20185 | 5949 | 8930 | 12450 | 12171 | 27276 | 7386 | 14590 | 11086 |
GCF_000801105.2 | NC_079518 | NC_079518.1 | Raphanus sativus cultivar WK10039 chromosome 8; ASM80110v3; whole genome shotgun sequence. | 8835431 | 8827794 | 4774784 | 4767262 | 23500 | 27228771 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.35 | 0.9472 | 0.0012 | 0.9988 | 1.9343 | 1985 | 1961 | 3946 | 2632163 | 2923454 | 1731485 | 1881682 | 1600 | 9170384 | 0.28 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.9084 | 0.1662 | 0.853 | 1.9596 | 6565 | 1640 | 1613 | 3253 | 1119215 | 1035280 | 856743 | 986490 | 0 | 3997728 | 0.28 | 0.26 | 0.21 | 0.24 | 0 | 0.45 | 0.8745 | 0.2986 | 0.7593 | 1.9569 | 0 | 716430 | 956502 | 385784 | 402607 | 900 | 2462223 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8455 | 0.4012 | 0.6882 | 1.8474 | 0 | 227 | 246 | 473 | 129318 | 142802 | 85866 | 91394 | 0 | 449380 | 0.29 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.875 | 0.3028 | 0.755 | 1.9372 | 154 | 72972 | 95968 | 39841 | 40668 | 100 | 249549 | 0.26 | 0.41 | 0.16 | 0.16 | 0 | 0.33 | 0.8495 | 0.3909 | 0.6949 | 1.8551 | 0 | 72 | 48 | 120 | 1637 | 2160 | 2230 | 2852 | 0 | 8879 | 0.18 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.885 | 0.2851 | 0.7618 | 1.9597 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 32087 | 43641 | 12216 | 20644 | 19908 | 41949 | 30040 | 21838 | 19027 | 21908 | 22048 | 39086 | 24595 | 12935 | 18201 | 27847 | 30882 | 23676 | 28560 | 24936 | 19486 | 23281 | 25128 | 37652 | 22503 | 15558 | 14531 | 28395 | 16941 | 28629 | 24683 | 27682 | 18060 | 16382 | 21111 | 22875 | 14343 | 8814 | 17881 | 14023 | 18971 | 7040 | 34844 | 13054 | 14985 | 29467 | 14059 | 30947 | 16703 | 18534 | 13504 | 11876 | 15137 | 21818 | 18745 | 20159 | 5701 | 8085 | 11750 | 11499 | 26838 | 6770 | 13688 | 10422 |
GCF_000801105.2 | NC_079519 | NC_079519.1 | Raphanus sativus cultivar WK10039 chromosome 9; ASM80110v3; whole genome shotgun sequence. | 12060769 | 12051220 | 6569999 | 6570004 | 30302 | 37282294 | 0.32 | 0.32 | 0.18 | 0.18 | 0 | 0.35 | 0.9446 | 0.0004 | 0.9996 | 1.9361 | 2543 | 2585 | 5128 | 3514464 | 3858900 | 2312248 | 2508870 | 2701 | 12197183 | 0.28 | 0.31 | 0.19 | 0.21 | 0 | 0.41 | 0.9084 | 0.1596 | 0.8581 | 1.9597 | 7324 | 2098 | 2156 | 4254 | 1496174 | 1388817 | 1152337 | 1321304 | 0 | 5358632 | 0.28 | 0.26 | 0.21 | 0.24 | 0 | 0.45 | 0.875 | 0.2987 | 0.7586 | 1.9565 | 2 | 921418 | 1225480 | 504798 | 525784 | 1800 | 3179280 | 0.27 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8447 | 0.4021 | 0.6882 | 1.8445 | 0 | 297 | 315 | 612 | 155659 | 167703 | 102544 | 106992 | 0 | 532898 | 0.29 | 0.3 | 0.2 | 0.21 | 0 | 0.4 | 0.8743 | 0.2972 | 0.759 | 1.9376 | 1 | 105508 | 132609 | 58418 | 58491 | 100 | 355126 | 0.26 | 0.41 | 0.16 | 0.16 | 0 | 0.32 | 0.8489 | 0.4042 | 0.6872 | 1.8501 | 0 | 51 | 54 | 105 | 1513 | 1833 | 1953 | 2467 | 0 | 7766 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8881 | 0.2578 | 0.7795 | 1.9659 | 0 | 5 | 4 | 9 | 2330 | 2249 | 2195 | 2706 | 0 | 9480 | 0.23 | 0.23 | 0.25 | 0.28 | 0 | 0.53 | 0.9068 | 0.0836 | 0.9226 | 1.9921 | 0 | 43080 | 58355 | 16051 | 27354 | 26469 | 55175 | 40281 | 29320 | 25631 | 29237 | 29293 | 51756 | 32580 | 17744 | 23832 | 38056 | 40885 | 31394 | 38656 | 33993 | 26238 | 30576 | 35498 | 50224 | 30179 | 20795 | 19563 | 37914 | 22118 | 37798 | 33712 | 37725 | 24911 | 21485 | 28163 | 30675 | 19452 | 12037 | 23503 | 18469 | 25600 | 9702 | 46924 | 17713 | 19584 | 39730 | 18983 | 41757 | 22582 | 24828 | 18532 | 16791 | 20541 | 28232 | 25486 | 25574 | 7594 | 11276 | 15923 | 15437 | 35906 | 9294 | 18274 | 14502 |
NA | NC_018551 | NC_018551.1 | Raphanus sativus mitochondrion; complete genome. | 71113 | 70469 | 58539 | 58305 | 0 | 258426 | 0.28 | 0.27 | 0.23 | 0.23 | 0 | 0.45 | 0.9484 | 0.0066 | 0.9935 | 1.9934 | 25 | 31 | 56 | 13369 | 13596 | 11205 | 12482 | 0 | 50652 | 0.25 | 0.28 | 0.22 | 0.25 | 0 | 0.46 | 0.9053 | 0.2122 | 0.8169 | 1.9741 | 134 | 13 | 14 | 27 | 6021 | 6850 | 4521 | 4850 | 0 | 22242 | 0.28 | 0.31 | 0.2 | 0.22 | 0 | 0.42 | 0.9016 | 0.218 | 0.8123 | 1.9632 | 134 | 4104 | 3647 | 3785 | 4270 | 0 | 15806 | 0.26 | 0.23 | 0.24 | 0.28 | 0 | 0.52 | 0.9222 | 0.1261 | 0.8835 | 1.9933 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10 | 8 | 18 | 308 | 364 | 315 | 388 | 0 | 1375 | 0.22 | 0.26 | 0.23 | 0.28 | 0 | 0.51 | 0.8937 | 0.2149 | 0.8159 | 1.9816 | 0 | 0 | 3 | 3 | 1369 | 1131 | 1162 | 1481 | 0 | 5143 | 0.26 | 0.22 | 0.23 | 0.28 | 0 | 0.52 | 0.9163 | 0.1899 | 0.8283 | 1.9913 | 0 | 194 | 130 | 121 | 122 | 102 | 89 | 189 | 239 | 100 | 111 | 176 | 218 | 111 | 64 | 120 | 91 | 151 | 100 | 219 | 301 | 76 | 171 | 84 | 156 | 56 | 94 | 102 | 165 | 183 | 178 | 132 | 159 | 84 | 150 | 93 | 72 | 39 | 56 | 59 | 88 | 86 | 48 | 224 | 62 | 47 | 127 | 105 | 138 | 74 | 154 | 80 | 61 | 191 | 142 | 72 | 121 | 15 | 50 | 70 | 88 | 155 | 18 | 24 | 112 |
NA | NC_024469 | NC_024469.1 | Raphanus sativus chloroplast; complete genome. | 48078 | 49557 | 28366 | 27367 | 0 | 153368 | 0.31 | 0.32 | 0.18 | 0.18 | 0 | 0.36 | 0.9349 | 0.0331 | 0.9675 | 1.9453 | 52 | 80 | 132 | 33798 | 33232 | 19520 | 22973 | 0 | 109523 | 0.29 | 0.3 | 0.19 | 0.23 | 0 | 0.42 | 0.8928 | 0.2208 | 0.8096 | 1.9453 | 73 | 31 | 55 | 86 | 24752 | 25374 | 13745 | 15689 | 0 | 79560 | 0.31 | 0.32 | 0.17 | 0.21 | 0 | 0.37 | 0.8851 | 0.2597 | 0.7864 | 1.9225 | 73 | 2711 | 2445 | 1192 | 1449 | 0 | 7797 | 0.35 | 0.31 | 0.15 | 0.19 | 0 | 0.34 | 0.8993 | 0.146 | 0.7767 | 1.918 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17 | 20 | 37 | 619 | 709 | 652 | 810 | 0 | 2790 | 0.22 | 0.25 | 0.23 | 0.29 | 0 | 0.53 | 0.8783 | 0.2284 | 0.8108 | 1.968 | 0 | 4 | 4 | 8 | 2332 | 1710 | 2136 | 2872 | 0 | 9050 | 0.26 | 0.2 | 0.23 | 0.31 | 0 | 0.53 | 0.9103 | 0.2852 | 0.7527 | 1.9789 | 0 | 600 | 362 | 502 | 550 | 372 | 331 | 614 | 1132 | 300 | 452 | 1006 | 1045 | 417 | 153 | 409 | 312 | 597 | 204 | 531 | 1092 | 173 | 562 | 182 | 822 | 217 | 238 | 396 | 528 | 798 | 725 | 438 | 584 | 171 | 722 | 406 | 205 | 151 | 199 | 197 | 204 | 137 | 110 | 1152 | 170 | 79 | 530 | 290 | 464 | 251 | 459 | 208 | 147 | 924 | 417 | 169 | 297 | 33 | 131 | 134 | 334 | 729 | 72 | 25 | 353 |