Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_028751815.1 | NC_080387 | NC_080387.1 | Salvia miltiorrhiza cultivar Shanhuang (shh) chromosome 1; IMPLAD_Smil_shh; whole genome shotgun sequence. | 24303756 | 24291607 | 14399628 | 14373483 | 359586 | 77728060 | 0.31 | 0.31 | 0.19 | 0.18 | 0 | 0.37 | 0.9401 | 0.0012 | 0.9988 | 1.9497 | 3139 | 3052 | 6191 | 6827058 | 7584184 | 4378594 | 4753077 | 49475 | 23592388 | 0.28 | 0.31 | 0.19 | 0.22 | 0 | 0.41 | 0.909 | 0.1733 | 0.8469 | 1.9574 | 13489 | 2456 | 2400 | 4856 | 1689007 | 1609184 | 1378188 | 1599364 | 0 | 6275743 | 0.28 | 0.26 | 0.21 | 0.25 | 0 | 0.46 | 0.8746 | 0.2968 | 0.7602 | 1.9543 | 5 | 2122149 | 2675623 | 1179067 | 1269892 | 7684 | 7254415 | 0.28 | 0.39 | 0.16 | 0.17 | 0 | 0.33 | 0.8587 | 0.3419 | 0.7271 | 1.8716 | 0 | 569 | 559 | 1128 | 278303 | 314853 | 198072 | 193705 | 0 | 984933 | 0.29 | 0.31 | 0.2 | 0.2 | 0 | 0.41 | 0.8669 | 0.3383 | 0.7313 | 1.9261 | 0 | 431805 | 508295 | 231961 | 303691 | 7613 | 1483365 | 0.28 | 0.37 | 0.16 | 0.19 | 0 | 0.35 | 0.8652 | 0.3413 | 0.7276 | 1.8862 | 0 | 43 | 38 | 81 | 1168 | 1433 | 1515 | 1847 | 0 | 5963 | 0.2 | 0.24 | 0.25 | 0.31 | 0 | 0.56 | 0.8862 | 0.2365 | 0.7983 | 1.969 | 0 | 0 | 2 | 2 | 844 | 694 | 856 | 1071 | 0 | 3465 | 0.24 | 0.21 | 0.25 | 0.29 | 0 | 0.54 | 0.8966 | 0.1463 | 0.8657 | 1.989 | 0 | 52299 | 62858 | 16752 | 29110 | 35622 | 61896 | 42711 | 43148 | 31098 | 36484 | 45797 | 55680 | 35366 | 18752 | 26697 | 34907 | 38415 | 42610 | 44818 | 41525 | 35781 | 29128 | 38423 | 59935 | 36480 | 23337 | 20269 | 50157 | 29146 | 39996 | 37188 | 38079 | 25575 | 26048 | 28571 | 33268 | 24549 | 20441 | 25530 | 33152 | 30519 | 16154 | 50781 | 31893 | 28124 | 39980 | 29182 | 40154 | 24069 | 30443 | 24717 | 23638 | 22007 | 29136 | 31773 | 29631 | 8137 | 16937 | 22192 | 14945 | 41328 | 9377 | 21657 | 17783 |
GCF_028751815.1 | NC_080388 | NC_080388.1 | Salvia miltiorrhiza cultivar Shanhuang (shh) chromosome 2; IMPLAD_Smil_shh; whole genome shotgun sequence. | 23607304 | 23586703 | 14071025 | 14084628 | 415958 | 75765618 | 0.31 | 0.31 | 0.19 | 0.19 | 0.01 | 0.37 | 0.9392 | 0.0009 | 0.9991 | 1.9506 | 2715 | 2886 | 5601 | 6043310 | 6687465 | 3837144 | 4180047 | 36916 | 20784882 | 0.28 | 0.31 | 0.19 | 0.22 | 0 | 0.41 | 0.9086 | 0.1754 | 0.8453 | 1.9559 | 30596 | 2112 | 2280 | 4392 | 1547228 | 1461226 | 1240619 | 1448430 | 0 | 5697503 | 0.28 | 0.26 | 0.21 | 0.25 | 0 | 0.46 | 0.8752 | 0.2984 | 0.7589 | 1.9543 | 4 | 1966377 | 2434543 | 1091923 | 1165703 | 14627 | 6673173 | 0.28 | 0.39 | 0.16 | 0.17 | 0 | 0.33 | 0.8577 | 0.3406 | 0.7282 | 1.8704 | 0 | 506 | 524 | 1030 | 265216 | 303115 | 188195 | 190100 | 0 | 946626 | 0.29 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.8666 | 0.3443 | 0.7265 | 1.9269 | 3 | 367082 | 442911 | 197930 | 258253 | 100 | 1266276 | 0.28 | 0.38 | 0.16 | 0.19 | 0 | 0.34 | 0.8645 | 0.348 | 0.7223 | 1.8817 | 0 | 46 | 34 | 80 | 1169 | 1382 | 1496 | 1875 | 0 | 5922 | 0.2 | 0.23 | 0.25 | 0.32 | 0 | 0.57 | 0.8805 | 0.2446 | 0.7916 | 1.965 | 0 | 6 | 0 | 6 | 1803 | 1676 | 1769 | 2189 | 0 | 7437 | 0.24 | 0.22 | 0.24 | 0.29 | 0 | 0.53 | 0.9059 | 0.1348 | 0.8756 | 1.9905 | 0 | 48812 | 56758 | 15602 | 26584 | 33182 | 56448 | 38834 | 39961 | 27225 | 32747 | 42573 | 52011 | 31091 | 16715 | 24174 | 31764 | 34044 | 38579 | 40772 | 38427 | 31952 | 26086 | 35099 | 54678 | 32616 | 21170 | 18658 | 45853 | 26877 | 36927 | 34675 | 33925 | 23186 | 24211 | 26199 | 30549 | 21734 | 18440 | 23390 | 29762 | 27693 | 14352 | 47774 | 28508 | 25048 | 36328 | 26838 | 36441 | 21466 | 27582 | 22259 | 21130 | 20196 | 25678 | 28936 | 26657 | 7552 | 14645 | 19687 | 13188 | 38152 | 8408 | 17755 | 15571 |
GCF_028751815.1 | NC_080389 | NC_080389.1 | Salvia miltiorrhiza cultivar Shanhuang (shh) chromosome 3; IMPLAD_Smil_shh; whole genome shotgun sequence. | 20078878 | 20043916 | 12173193 | 12172751 | 235023 | 64703761 | 0.31 | 0.31 | 0.19 | 0.19 | 0 | 0.38 | 0.9351 | 0.0009 | 0.9991 | 1.9545 | 2359 | 2390 | 4749 | 5581868 | 6101967 | 3476324 | 3786471 | 10875 | 18957505 | 0.28 | 0.31 | 0.19 | 0.21 | 0 | 0.41 | 0.9084 | 0.1804 | 0.8416 | 1.9551 | 31830 | 1738 | 1753 | 3491 | 1358022 | 1279838 | 1030078 | 1221215 | 0 | 4889153 | 0.28 | 0.26 | 0.2 | 0.25 | 0 | 0.45 | 0.8759 | 0.2979 | 0.7596 | 1.9533 | 0 | 1531612 | 1873053 | 844790 | 897863 | 7308 | 5154626 | 0.28 | 0.39 | 0.16 | 0.17 | 0 | 0.33 | 0.8571 | 0.343 | 0.7266 | 1.8668 | 0 | 543 | 565 | 1108 | 283056 | 316869 | 200042 | 196559 | 0 | 996526 | 0.29 | 0.31 | 0.2 | 0.2 | 0 | 0.41 | 0.8681 | 0.3383 | 0.731 | 1.9263 | 84 | 408430 | 486553 | 223304 | 288186 | 0 | 1406473 | 0.28 | 0.38 | 0.16 | 0.18 | 0 | 0.34 | 0.8647 | 0.3398 | 0.7279 | 1.8817 | 0 | 28 | 23 | 51 | 707 | 874 | 981 | 1185 | 0 | 3747 | 0.19 | 0.23 | 0.26 | 0.32 | 0 | 0.58 | 0.8845 | 0.241 | 0.7931 | 1.9655 | 0 | 3 | 1 | 4 | 124 | 118 | 128 | 147 | 0 | 517 | 0.24 | 0.23 | 0.25 | 0.29 | 0 | 0.53 | 0.9013 | 0.0935 | 0.9119 | 1.994 | 0 | 43280 | 49077 | 13900 | 23185 | 27922 | 48392 | 31771 | 36332 | 22788 | 29810 | 36330 | 46955 | 27838 | 13367 | 22088 | 27171 | 29318 | 32376 | 33682 | 33098 | 26871 | 21441 | 28467 | 46055 | 27113 | 17099 | 17055 | 41533 | 24194 | 30196 | 30121 | 31417 | 19053 | 23286 | 23306 | 24172 | 17828 | 14260 | 19516 | 23076 | 22695 | 11269 | 42968 | 21653 | 21290 | 31474 | 21258 | 32375 | 19520 | 24708 | 18298 | 16409 | 18992 | 20849 | 24716 | 23083 | 8000 | 11671 | 14782 | 11699 | 33829 | 9052 | 17368 | 13185 |
GCF_028751815.1 | NC_080390 | NC_080390.1 | Salvia miltiorrhiza cultivar Shanhuang (shh) chromosome 4; IMPLAD_Smil_shh; whole genome shotgun sequence. | 17513867 | 17556110 | 10592544 | 10574471 | 195345 | 56432337 | 0.31 | 0.31 | 0.19 | 0.19 | 0 | 0.38 | 0.9412 | 0.0021 | 0.9979 | 1.9537 | 2081 | 2095 | 4176 | 3991721 | 4515882 | 2606961 | 2879236 | 24484 | 14018284 | 0.28 | 0.31 | 0.2 | 0.22 | 0 | 0.41 | 0.9097 | 0.1713 | 0.8485 | 1.9585 | 5204 | 1681 | 1630 | 3311 | 1139227 | 1071083 | 940473 | 1096147 | 0 | 4246930 | 0.28 | 0.26 | 0.21 | 0.25 | 0 | 0.46 | 0.8742 | 0.3017 | 0.7568 | 1.9531 | 1 | 1532728 | 1929335 | 852317 | 920046 | 16542 | 5250968 | 0.28 | 0.39 | 0.16 | 0.17 | 0 | 0.33 | 0.8589 | 0.3417 | 0.7273 | 1.8725 | 0 | 314 | 387 | 701 | 170608 | 188745 | 118895 | 120236 | 0 | 598484 | 0.29 | 0.3 | 0.2 | 0.21 | 0 | 0.41 | 0.8682 | 0.3393 | 0.7309 | 1.9264 | 90 | 257117 | 303620 | 140217 | 181159 | 0 | 882113 | 0.28 | 0.38 | 0.16 | 0.19 | 0 | 0.34 | 0.8631 | 0.3383 | 0.7297 | 1.8829 | 0 | 40 | 37 | 77 | 1114 | 1372 | 1421 | 1795 | 0 | 5702 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8779 | 0.2714 | 0.7723 | 1.9635 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 35697 | 42600 | 11733 | 19575 | 25231 | 43148 | 29589 | 28351 | 21206 | 24635 | 29448 | 38203 | 23179 | 12840 | 17773 | 23315 | 25017 | 28766 | 29400 | 27609 | 24547 | 19335 | 26348 | 40100 | 25280 | 16110 | 13546 | 32668 | 19102 | 26865 | 25360 | 24673 | 17431 | 17026 | 19343 | 23142 | 16576 | 14235 | 16777 | 23456 | 20684 | 11662 | 34915 | 22375 | 19234 | 26999 | 20267 | 26965 | 16100 | 20528 | 16616 | 17226 | 14265 | 19807 | 22460 | 19832 | 5386 | 11904 | 15273 | 10292 | 27445 | 6112 | 13814 | 12156 |
GCF_028751815.1 | NC_080391 | NC_080391.1 | Salvia miltiorrhiza cultivar Shanhuang (shh) chromosome 5; IMPLAD_Smil_shh; whole genome shotgun sequence. | 17862216 | 17866307 | 10728782 | 10720620 | 240892 | 57418817 | 0.31 | 0.31 | 0.19 | 0.19 | 0 | 0.37 | 0.9436 | 0.0005 | 0.9995 | 1.9524 | 2261 | 2133 | 4394 | 4765359 | 5279789 | 3052561 | 3316774 | 19145 | 16433628 | 0.28 | 0.31 | 0.2 | 0.22 | 0 | 0.41 | 0.9096 | 0.1686 | 0.8505 | 1.9587 | 33594 | 1787 | 1683 | 3470 | 1227850 | 1154420 | 989457 | 1148514 | 0 | 4520241 | 0.28 | 0.26 | 0.21 | 0.25 | 0 | 0.46 | 0.8754 | 0.2968 | 0.7598 | 1.9544 | 7 | 1472122 | 1857572 | 826987 | 889555 | 100 | 5046336 | 0.27 | 0.39 | 0.16 | 0.17 | 0 | 0.33 | 0.8585 | 0.3456 | 0.7245 | 1.8735 | 0 | 402 | 378 | 780 | 196198 | 220675 | 134783 | 134298 | 0 | 685954 | 0.29 | 0.31 | 0.2 | 0.2 | 0 | 0.4 | 0.869 | 0.3384 | 0.7305 | 1.9252 | 125 | 278052 | 328156 | 150669 | 193584 | 0 | 950461 | 0.28 | 0.37 | 0.16 | 0.19 | 0 | 0.35 | 0.8678 | 0.3281 | 0.7364 | 1.8884 | 0 | 33 | 27 | 60 | 865 | 1045 | 1147 | 1418 | 0 | 4475 | 0.19 | 0.23 | 0.26 | 0.32 | 0 | 0.57 | 0.8886 | 0.242 | 0.7912 | 1.9665 | 0 | 1 | 0 | 1 | 30 | 24 | 32 | 33 | 0 | 119 | 0.25 | 0.2 | 0.27 | 0.28 | 0 | 0.55 | 0.8809 | 0.1265 | 0.8848 | 1.9897 | 0 | 37776 | 44720 | 12438 | 20810 | 26422 | 44752 | 31000 | 32084 | 21950 | 26796 | 32530 | 42267 | 24983 | 12994 | 19131 | 25362 | 27108 | 29491 | 32088 | 30039 | 25161 | 20614 | 27474 | 43772 | 26274 | 16930 | 14839 | 34912 | 21459 | 28902 | 27167 | 27215 | 18647 | 18974 | 20208 | 24744 | 17204 | 15057 | 18635 | 23965 | 22589 | 11660 | 37903 | 23302 | 20004 | 28912 | 20507 | 29217 | 17043 | 21874 | 17027 | 17038 | 15714 | 20900 | 22792 | 20877 | 5880 | 11527 | 15281 | 10754 | 30849 | 6561 | 14870 | 12652 |
GCF_028751815.1 | NC_080392 | NC_080392.1 | Salvia miltiorrhiza cultivar Shanhuang (shh) chromosome 6; IMPLAD_Smil_shh; whole genome shotgun sequence. | 14153928 | 14130258 | 8581158 | 8581382 | 191912 | 45638638 | 0.31 | 0.31 | 0.19 | 0.19 | 0 | 0.38 | 0.9429 | 0.0008 | 0.9992 | 1.9542 | 1646 | 1647 | 3293 | 3330093 | 3751707 | 2126391 | 2342754 | 11919 | 11562864 | 0.28 | 0.31 | 0.19 | 0.21 | 0 | 0.41 | 0.9088 | 0.1767 | 0.8439 | 1.9552 | 10316 | 1232 | 1244 | 2476 | 866333 | 815317 | 700085 | 821784 | 0 | 3203519 | 0.28 | 0.26 | 0.21 | 0.25 | 0 | 0.46 | 0.8744 | 0.303 | 0.7556 | 1.9537 | 0 | 1190720 | 1484317 | 659002 | 706087 | 7319 | 4047445 | 0.28 | 0.39 | 0.16 | 0.17 | 0 | 0.33 | 0.8588 | 0.3399 | 0.7289 | 1.8718 | 0 | 369 | 356 | 725 | 168843 | 193352 | 122647 | 120187 | 0 | 605029 | 0.29 | 0.31 | 0.2 | 0.21 | 0 | 0.41 | 0.8681 | 0.3416 | 0.7294 | 1.9264 | 0 | 276386 | 330672 | 148491 | 192837 | 0 | 948386 | 0.28 | 0.38 | 0.16 | 0.19 | 0 | 0.34 | 0.8643 | 0.3441 | 0.7251 | 1.8802 | 0 | 23 | 13 | 36 | 512 | 624 | 674 | 852 | 0 | 2662 | 0.19 | 0.23 | 0.25 | 0.32 | 0 | 0.57 | 0.8913 | 0.2295 | 0.8013 | 1.9688 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 26695 | 32400 | 8885 | 14565 | 18888 | 33058 | 22637 | 22203 | 15353 | 18207 | 22912 | 28942 | 17484 | 9330 | 13316 | 17856 | 19214 | 21267 | 22691 | 21138 | 18416 | 14939 | 19296 | 31359 | 19056 | 11807 | 10155 | 24912 | 15132 | 20473 | 19041 | 18608 | 13227 | 13053 | 14569 | 17478 | 12527 | 10453 | 12961 | 17008 | 15625 | 8557 | 26849 | 16060 | 14403 | 20873 | 14937 | 20467 | 12028 | 15403 | 12459 | 12347 | 10985 | 14652 | 16632 | 14391 | 4108 | 8419 | 11103 | 7925 | 21103 | 4648 | 10388 | 9019 |
GCF_028751815.1 | NC_080393 | NC_080393.1 | Salvia miltiorrhiza cultivar Shanhuang (shh) chromosome 7; IMPLAD_Smil_shh; whole genome shotgun sequence. | 18842044 | 18798899 | 11181244 | 11175637 | 281766 | 60279590 | 0.31 | 0.31 | 0.19 | 0.19 | 0 | 0.37 | 0.9441 | 0.0014 | 0.9986 | 1.9503 | 2288 | 2434 | 4722 | 5203491 | 5806449 | 3281995 | 3600065 | 27829 | 17919829 | 0.28 | 0.31 | 0.19 | 0.21 | 0 | 0.41 | 0.9094 | 0.173 | 0.8471 | 1.9562 | 47346 | 1774 | 1895 | 3669 | 1329590 | 1254556 | 1046877 | 1241053 | 0 | 4872076 | 0.28 | 0.26 | 0.21 | 0.25 | 0 | 0.46 | 0.8746 | 0.3007 | 0.7579 | 1.9528 | 5 | 1685867 | 2127514 | 933993 | 1010185 | 20640 | 5778199 | 0.27 | 0.4 | 0.16 | 0.17 | 0 | 0.33 | 0.8583 | 0.3441 | 0.7256 | 1.8694 | 0 | 425 | 468 | 893 | 210465 | 239513 | 149265 | 145948 | 0 | 745191 | 0.28 | 0.31 | 0.2 | 0.2 | 0 | 0.41 | 0.8675 | 0.3363 | 0.7318 | 1.9267 | 0 | 300809 | 359189 | 168913 | 214346 | 0 | 1043257 | 0.27 | 0.38 | 0.16 | 0.18 | 0 | 0.35 | 0.8618 | 0.3566 | 0.7179 | 1.8796 | 0 | 28 | 27 | 55 | 788 | 985 | 1014 | 1291 | 0 | 4078 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8772 | 0.2852 | 0.7607 | 1.9609 | 0 | 0 | 1 | 1 | 30 | 23 | 33 | 33 | 0 | 119 | 0.25 | 0.19 | 0.28 | 0.28 | 0 | 0.55 | 0.9099 | 0.1321 | 0.8833 | 1.9858 | 0 | 41242 | 49293 | 13846 | 22709 | 28665 | 50226 | 34176 | 34929 | 22823 | 27928 | 36066 | 46104 | 27040 | 14033 | 21512 | 26322 | 28810 | 33254 | 33318 | 32614 | 27689 | 22425 | 28707 | 49775 | 28633 | 17452 | 16126 | 39739 | 23734 | 30399 | 29062 | 30074 | 19365 | 20724 | 22304 | 25904 | 18443 | 15393 | 19033 | 24692 | 23661 | 11882 | 41474 | 23618 | 21353 | 32264 | 22380 | 30974 | 18452 | 24338 | 18059 | 17541 | 17472 | 22151 | 24906 | 22076 | 5717 | 12037 | 15987 | 11790 | 32768 | 6526 | 14420 | 13243 |
GCF_028751815.1 | NC_080394 | NC_080394.1 | Salvia miltiorrhiza cultivar Shanhuang (shh) chromosome 8; IMPLAD_Smil_shh; whole genome shotgun sequence. | 18304386 | 18333736 | 10838729 | 10834242 | 221216 | 58532309 | 0.31 | 0.31 | 0.19 | 0.19 | 0 | 0.37 | 0.9431 | 0.001 | 0.999 | 1.95 | 2483 | 2479 | 4962 | 4905602 | 5496332 | 3153941 | 3487808 | 43816 | 17087499 | 0.28 | 0.31 | 0.19 | 0.22 | 0 | 0.41 | 0.9094 | 0.1726 | 0.8476 | 1.9582 | 133387 | 2014 | 1995 | 4009 | 1450024 | 1362418 | 1154267 | 1360083 | 0 | 5326792 | 0.28 | 0.26 | 0.21 | 0.25 | 0 | 0.46 | 0.8749 | 0.2967 | 0.7601 | 1.9548 | 13 | 1527151 | 1975518 | 850757 | 925229 | 22207 | 5300862 | 0.27 | 0.39 | 0.16 | 0.17 | 0 | 0.33 | 0.8577 | 0.3518 | 0.7204 | 1.871 | 0 | 366 | 395 | 761 | 188041 | 211129 | 128185 | 130471 | 0 | 657826 | 0.29 | 0.31 | 0.2 | 0.21 | 0 | 0.4 | 0.8676 | 0.3456 | 0.7255 | 1.9248 | 0 | 291271 | 344005 | 159583 | 204881 | 0 | 999740 | 0.28 | 0.38 | 0.16 | 0.19 | 0 | 0.35 | 0.8644 | 0.3397 | 0.7287 | 1.8837 | 0 | 55 | 38 | 93 | 1322 | 1741 | 1681 | 2163 | 0 | 6907 | 0.19 | 0.25 | 0.24 | 0.31 | 0 | 0.56 | 0.8865 | 0.2974 | 0.7541 | 1.9641 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 45297 | 55127 | 14692 | 24771 | 30975 | 53878 | 36899 | 38218 | 25716 | 30443 | 39175 | 49980 | 29235 | 15407 | 22875 | 29313 | 31769 | 35718 | 36936 | 34652 | 30498 | 24138 | 32519 | 52319 | 30392 | 19182 | 17150 | 43027 | 24006 | 34232 | 32575 | 31830 | 21921 | 21997 | 23940 | 28916 | 19832 | 17113 | 21389 | 28047 | 25545 | 13649 | 46382 | 26651 | 24610 | 34771 | 24433 | 34076 | 20420 | 25857 | 20226 | 19823 | 18651 | 24156 | 27236 | 24401 | 6743 | 13408 | 17833 | 12586 | 34290 | 7625 | 16650 | 14728 |
NA | NC_023209 | NC_023209.1 | Salvia miltiorrhiza mitochondrion; complete genome. | 139131 | 138506 | 111146 | 110453 | 0 | 499236 | 0.28 | 0.28 | 0.22 | 0.22 | 0 | 0.44 | 0.9518 | 0.0054 | 0.9946 | 1.9909 | 65 | 100 | 165 | 28218 | 28820 | 23126 | 24698 | 0 | 104862 | 0.27 | 0.28 | 0.22 | 0.23 | 0 | 0.45 | 0.9006 | 0.204 | 0.8232 | 1.9718 | 78 | 51 | 81 | 132 | 19540 | 20954 | 15494 | 15856 | 0 | 71844 | 0.27 | 0.29 | 0.22 | 0.22 | 0 | 0.44 | 0.8993 | 0.2036 | 0.8238 | 1.969 | 78 | 49825 | 49059 | 40076 | 40854 | 0 | 179814 | 0.27 | 0.25 | 0.23 | 0.26 | 0 | 0.49 | 0.9214 | 0.1055 | 0.812 | 1.9843 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11 | 11 | 22 | 388 | 446 | 366 | 470 | 0 | 1670 | 0.23 | 0.27 | 0.22 | 0.28 | 0 | 0.5 | 0.8921 | 0.2108 | 0.8172 | 1.9805 | 0 | 2 | 3 | 5 | 2229 | 1808 | 1950 | 2506 | 0 | 8493 | 0.24 | 0.23 | 0.25 | 0.28 | 0 | 0.52 | 0.912 | 0.2537 | 0.7822 | 1.9812 | 0 | 590 | 507 | 394 | 423 | 356 | 401 | 562 | 657 | 349 | 371 | 555 | 687 | 393 | 171 | 369 | 305 | 535 | 312 | 548 | 746 | 265 | 442 | 340 | 588 | 255 | 311 | 412 | 473 | 538 | 504 | 445 | 648 | 245 | 451 | 313 | 286 | 202 | 264 | 263 | 309 | 289 | 183 | 668 | 225 | 178 | 436 | 311 | 468 | 247 | 407 | 255 | 182 | 527 | 453 | 300 | 367 | 58 | 216 | 225 | 256 | 480 | 66 | 53 | 309 |
NA | NC_020431 | NC_020431.1 | Salvia miltiorrhiza chloroplast; complete genome. | 46368 | 47424 | 29244 | 28292 | 0 | 151328 | 0.31 | 0.31 | 0.19 | 0.19 | 0 | 0.38 | 0.9371 | 0.0278 | 0.9726 | 1.9581 | 51 | 81 | 132 | 32830 | 32447 | 19934 | 23395 | 0 | 108606 | 0.28 | 0.29 | 0.19 | 0.23 | 0 | 0.43 | 0.8966 | 0.2154 | 0.8136 | 1.9518 | 73 | 30 | 55 | 85 | 23500 | 24183 | 13718 | 15600 | 0 | 77001 | 0.3 | 0.31 | 0.17 | 0.21 | 0 | 0.38 | 0.8878 | 0.2611 | 0.7857 | 1.929 | 73 | 2275 | 2091 | 1074 | 1295 | 0 | 6735 | 0.34 | 0.31 | 0.16 | 0.19 | 0 | 0.35 | 0.899 | 0.1369 | 0.7761 | 1.9294 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17 | 20 | 37 | 614 | 694 | 663 | 820 | 0 | 2791 | 0.22 | 0.25 | 0.24 | 0.3 | 0 | 0.53 | 0.8783 | 0.247 | 0.7939 | 1.966 | 0 | 4 | 4 | 8 | 2354 | 1704 | 2136 | 2858 | 0 | 9052 | 0.26 | 0.2 | 0.23 | 0.31 | 0 | 0.53 | 0.9106 | 0.2798 | 0.7577 | 1.9791 | 0 | 616 | 367 | 517 | 530 | 373 | 328 | 583 | 1063 | 340 | 461 | 945 | 980 | 391 | 145 | 414 | 286 | 572 | 193 | 495 | 980 | 198 | 506 | 178 | 833 | 217 | 249 | 373 | 562 | 748 | 693 | 456 | 585 | 174 | 649 | 365 | 218 | 147 | 224 | 182 | 222 | 118 | 114 | 1012 | 186 | 72 | 505 | 316 | 465 | 216 | 465 | 199 | 154 | 816 | 376 | 167 | 317 | 42 | 133 | 160 | 322 | 708 | 65 | 36 | 339 |