GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	fr_gene_N Frequency of 'N' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000188115.4	NC_015438	NC_015438.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 1; SL3.0; whole genome shotgun sequence.	29113417	29093860	14932641	14865330	10450621	98455869	0.3	0.3	0.15	0.15	0.11	0.3	0.9381	0.0026	0.9974	1.864	1864	1830	3694	5176165	5923971	2947019	3268224	97780	17413159	0.3	0.33	0.17	0.19	0	0.37	0.9075	0.157	0.8595	1.9336	30471	1614	1531	3145	1240259	1177653	795144	966005	7	4179068	0.3	0.28	0.19	0.23	0.42	0.8722	0.2987	0.7584	1.9491	0	2593814	3181046	1430797	1534742	52976	8793375	0.28	0.39	0.16	0.17	0.33	0.8664	0.3038	0.7531	1.8765	179	230	409	166363	181662	92342	99842	540209	0.31	0.32	0.18	0.19	0	0.37	0.8726	0.2791	0.7718	1.9172	1796	266363	302151	136367	143992	20020	868893	0.29	0.4	0.15	0.16	0	0.31	0.8615	0.3059	0.7531	1.8474	50	39	89	1269	1622	1632	2039	6562	0.19	0.25	0.25	0.31	0.56	0.8778	0.2854	0.7645	1.9638	0	12	12	379	343	362	378	1462	0.26	0.23	0.25	0.26	0	0.51	0.9004	0.0857	0.9208	1.9954	36447	41286	15769	24321	26347	33188	32268	35503	15971	22764	38318	45521	30613	6757	22508	21770	30458	22117	24839	34807	19145	23974	16284	43701	22184	12420	15283	35374	24543	29091	20110	31094	13525	21226	24509	17167	12460	8691	15229	12202	16072	4867	44148	12466	15283	33196	14748	28836	20008	23418	8973	6531	21188	22648	19411	23406	6638	5916	6703	8894	32770	8447	15650	8639
GCF_000188115.4	NC_015439	NC_015439.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 2; SL3.0; whole genome shotgun sequence.	16127384	16161161	8192784	8224500	7271751	55977580	0.29	0.29	0.15	0.15	0.13	0.29	0.9381	0.003	0.997	1.847	1472	1463	2935	3952544	4480101	2278952	2503300	102362	13317259	0.3	0.33	0.17	0.2	0	0.37	0.9092	0.1487	0.8666	1.9353	4127	1278	1287	2565	1019115	967681	655762	791952	0	3434510	0.3	0.28	0.19	0.23	0.42	0.873	0.2951	0.7607	1.9502	0	1850793	2253159	1034188	1085861	63673	6287674	0.28	0.39	0.16	0.17	0.33	0.8648	0.305	0.7525	1.8738	150	128	278	146766	168054	85092	92023	491935	0.3	0.32	0.17	0.2	0	0.37	0.8712	0.287	0.7684	1.9188	38	205094	236218	102727	113754	2545	660338	0.29	0.39	0.15	0.17	0	0.32	0.8675	0.3062	0.7504	1.8676	31	34	65	906	1157	1206	1500	4769	0.19	0.24	0.25	0.31	0.57	0.8905	0.2445	0.7909	1.9681	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	30004	33472	12929	19928	21918	26982	25825	29464	13155	19273	31457	37721	24582	5487	18010	18194	24990	18155	20893	28450	16538	19255	13724	35547	19237	10492	13164	29673	20139	24038	16554	26084	10915	17560	20140	14252	10401	7171	12534	9970	13364	3980	36214	10364	12564	26911	12217	23501	15859	19135	7154	5262	17742	18426	15986	19063	5476	4759	5321	7105	26955	6760	12059	6881
GCF_000188115.4	NC_015440	NC_015440.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 3; SL3.0; whole genome shotgun sequence.	20276221	20323523	10452711	10476253	10761438	72290146	0.28	0.28	0.14	0.14	0.15	0.29	0.9393	0.0023	0.9977	1.8363	1473	1458	2931	3955482	4502345	2264060	2507888	141126	13370901	0.3	0.33	0.17	0.19	0	0.37	0.9088	0.1519	0.8635	1.933	4257	1273	1261	2534	995905	949109	642979	784388	0	3372381	0.29	0.28	0.19	0.24	0.42	0.8735	0.2968	0.7593	1.95	41	1947647	2383119	1073187	1145097	87291	6636341	0.28	0.39	0.16	0.17	0.33	0.8655	0.3054	0.7523	1.873	145	143	288	109884	120946	61701	65657	358188	0.31	0.32	0.18	0.19	0	0.37	0.8685	0.2772	0.7746	1.9107	0	193044	219677	99146	105904	19880	637651	0.3	0.39	0.15	0.16	0.01	0.31	0.8677	0.2709	0.7782	1.8488	33	37	70	1026	1241	1302	1686	5255	0.19	0.24	0.25	0.32	0.57	0.8907	0.259	0.7789	1.9666	1	1	2	78	71	77	86	312	0.25	0.23	0.25	0.28	0	0.52	0.8778	0.1024	0.9035	1.9962	28991	32915	12743	19689	21282	26745	26378	29499	13218	18724	30492	36804	24015	5856	17730	17592	24395	17880	20452	27741	15714	18867	13861	34578	18547	9885	12388	28468	18905	24222	16854	25106	10883	17030	19499	13846	9962	6785	12014	9912	13120	3908	34937	10163	12948	26933	12055	23507	16054	18799	7396	5684	17059	17649	15779	18141	5439	4874	5792	7011	25977	6908	12896	7067
GCF_000188115.4	NC_015441	NC_015441.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 4; SL3.0; whole genome shotgun sequence.	20093747	20090088	10204974	10227582	5940647	66557038	0.3	0.3	0.15	0.15	0.09	0.31	0.9395	0.0012	0.9988	1.8733	1281	1203	2484	3594672	4048264	2000527	2232341	156926	12032730	0.3	0.33	0.17	0.19	0.01	0.36	0.9058	0.1586	0.8585	1.9248	16585	1058	1032	2090	845125	803967	529247	649851	0	2828190	0.3	0.28	0.19	0.23	0.42	0.8719	0.2987	0.7588	1.9467	0	1831223	2190190	990694	1067147	106218	6185472	0.28	0.39	0.16	0.17	0.32	0.8652	0.3017	0.7549	1.8689	170	126	296	100570	107021	53801	58563	319955	0.31	0.32	0.17	0.19	0	0.37	0.8697	0.2871	0.7661	1.9128	51	210371	231538	103707	110266	20624	676506	0.3	0.39	0.14	0.16	0.01	0.3	0.8649	0.2784	0.7737	1.8407	33	33	66	937	1152	1231	1548	4868	0.19	0.24	0.25	0.32	0.57	0.8818	0.2465	0.7904	1.9645	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	24935	27302	11014	16098	17627	22434	21261	24635	10537	15343	27156	31364	20761	4641	15545	14815	20561	14993	16718	23847	12815	16208	11264	30376	14912	7978	10882	24690	16627	19689	13899	21612	8704	14869	16352	11241	8238	5428	9788	7587	10709	3046	30398	7952	9816	22494	9696	19607	13265	16138	6365	4490	15312	14680	12925	15162	4645	3853	4640	6057	22466	5588	10046	5840
GCF_000188115.4	NC_015442	NC_015442.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 5; SL3.0; whole genome shotgun sequence.	20295904	20351353	10474362	10482995	5118953	66723567	0.3	0.31	0.16	0.16	0.08	0.31	0.9407	0.0018	0.9982	1.8836	1017	1012	2029	2877752	3238526	1594167	1775362	87774	9573581	0.3	0.34	0.17	0.19	0	0.36	0.9042	0.1631	0.8543	1.9251	5650	844	843	1687	665055	631405	410539	503228	0	2210227	0.3	0.28	0.19	0.23	0.42	0.8722	0.2999	0.7575	1.9458	0	1391972	1669700	753327	812589	71879	4699467	0.28	0.39	0.16	0.17	0.32	0.8647	0.3057	0.7521	1.87	130	126	256	109877	114870	60490	63361	348598	0.31	0.32	0.17	0.19	0	0.36	0.8708	0.273	0.7771	1.9126	0	208021	234706	104028	110329	4734	661818	0.3	0.4	0.15	0.15	0	0.3	0.864	0.2887	0.7658	1.8426	27	27	54	803	956	990	1269	4018	0.2	0.24	0.25	0.32	0.56	0.8898	0.2515	0.7828	1.9708	0	2	2	82	86	66	78	312	0.26	0.28	0.21	0.25	0	0.46	0.8512	0.1548	0.8593	1.9902	19392	21446	8566	12897	13403	17301	16352	19663	7956	12005	21344	24100	16435	3756	12212	11573	15966	11316	13094	19219	9647	12630	8486	23894	10857	6091	8585	18994	13437	15333	11058	16335	6789	11750	13366	8752	6268	4121	7813	5733	8111	2397	24197	6204	7580	17764	7311	15675	10599	12993	5139	3466	12056	11492	9750	11878	3557	2965	3587	4604	17756	4588	8202	4674
GCF_000188115.4	NC_015443	NC_015443.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 6; SL3.0; whole genome shotgun sequence.	14489740	14524616	7452428	7493621	5833871	49794276	0.29	0.29	0.15	0.15	0.12	0.3	0.9396	0.004	0.9961	1.858	1279	1297	2576	3279122	3741420	1864996	2063398	108316	11057252	0.3	0.33	0.17	0.2	0	0.37	0.9069	0.1586	0.8584	1.9317	6111	1073	1106	2179	814668	768563	520232	631321	0	2734784	0.3	0.28	0.19	0.24	0.42	0.8717	0.3032	0.7557	1.947	0	1626993	2002141	897884	958689	90680	5576387	0.28	0.39	0.16	0.17	0.32	0.8652	0.3055	0.7516	1.8718	141	125	266	90127	97489	49532	53801	290949	0.31	0.32	0.17	0.2	0	0.37	0.8696	0.2944	0.7607	1.9122	0	163550	184405	83233	86263	6991	524442	0.29	0.4	0.15	0.16	0	0.31	0.8655	0.2809	0.7703	1.8483	49	48	97	1365	1749	1796	2294	7204	0.19	0.24	0.25	0.32	0.57	0.891	0.2556	0.7811	1.9679	0	3	3	128	118	108	112	466	0.27	0.25	0.23	0.24	0	0.47	0.8909	0.086	0.9178	1.9958	24268	27021	10397	15882	17254	21505	20480	23427	10476	14906	25464	29691	20189	4519	14679	14077	19654	14587	16490	22546	12768	15439	10961	28352	15210	8164	10173	22708	15573	19147	13535	20179	8787	14100	16288	11264	7988	5462	9955	7827	10738	3026	28716	8101	10273	21333	9464	18795	12841	15303	5965	4342	13581	14726	12728	15129	4492	3777	4310	5792	21608	5846	10555	5600
GCF_000188115.4	NC_015444	NC_015444.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 7; SL3.0; whole genome shotgun sequence.	20588395	20538363	10684509	10642065	5722367	68175699	0.3	0.3	0.16	0.16	0.08	0.31	0.9403	0.0032	0.9968	1.8804	1141	1103	2244	3098928	3513833	1734283	1940637	90612	10378293	0.3	0.33	0.17	0.19	0	0.36	0.9055	0.1622	0.8557	1.9265	2569	927	917	1844	746163	708877	468156	574665	13	2497874	0.3	0.28	0.19	0.23	0.42	0.8727	0.2989	0.7584	1.9463	1952	1526482	1840967	832819	895814	65855	5161937	0.28	0.39	0.16	0.17	0.33	0.8657	0.3021	0.7543	1.8722	182	157	339	114589	126269	63380	68127	372365	0.31	0.33	0.18	0.19	0	0.36	0.8697	0.2761	0.7759	1.9107	116	216222	248368	107404	118723	21841	712558	0.3	0.39	0.14	0.15	0.01	0.3	0.8667	0.2887	0.764	1.838	18	18	36	548	606	663	829	2646	0.21	0.23	0.25	0.31	0.56	0.8856	0.2153	0.8121	1.9727	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21302	24057	9689	14368	15616	19614	19176	21849	9284	14013	23660	27694	18501	4144	13779	13174	18242	12929	14677	21497	10964	14644	9799	26365	12545	7094	9548	21304	14958	18215	11919	18485	7818	12887	14702	10164	7228	4709	8736	6787	9641	2652	27009	7116	8797	20170	8601	17357	11707	14092	5562	3921	13359	13279	11398	13954	3883	3296	4115	5228	19702	4990	8901	5183
GCF_000188115.4	NC_015445	NC_015445.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 8; SL3.0; whole genome shotgun sequence.	19879639	19823135	10271245	10297467	5715954	65987440	0.3	0.3	0.16	0.16	0.09	0.31	0.9401	0.0027	0.9973	1.8786	1106	1050	2156	3173832	3580184	1768423	1959807	86650	10568896	0.3	0.33	0.17	0.19	0	0.36	0.9068	0.1559	0.8602	1.9292	20545	941	873	1814	730024	692128	458228	562316	1	2442697	0.3	0.28	0.19	0.23	0.42	0.872	0.2979	0.7588	1.9474	0	1600234	1921378	869292	924430	50703	5366037	0.28	0.39	0.16	0.17	0.32	0.865	0.298	0.7578	1.8705	137	125	262	106948	115237	56502	62217	340904	0.31	0.32	0.17	0.19	0	0.37	0.8701	0.2851	0.769	1.9131	0	206589	231084	104897	110814	6911	660295	0.3	0.39	0.15	0.16	0	0.31	0.8681	0.2855	0.7662	1.8554	22	37	59	880	1032	1083	1384	4379	0.2	0.24	0.25	0.32	0.57	0.8761	0.2699	0.7725	1.9622	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	21490	23206	9544	14197	15667	18895	18710	21328	8953	13483	23504	26407	18112	4240	13615	12880	17198	13090	14421	20470	10712	14351	9220	25530	12353	6927	8965	20558	14674	17444	11829	18008	7718	12797	14792	9615	6813	4785	8750	6670	9204	2585	26448	7022	8710	19902	8397	17123	11756	13686	5602	3927	12783	13117	11161	13946	3715	3190	4129	5240	19056	4976	8986	5053
GCF_000188115.4	NC_015446	NC_015446.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 9; SL3.0; whole genome shotgun sequence.	21555493	21532137	11151081	11174310	7493324	72906345	0.3	0.3	0.15	0.15	0.1	0.31	0.9411	0.0016	0.9984	1.8685	1094	1027	2121	3122174	3534896	1745281	1934557	90666	10427574	0.3	0.34	0.17	0.19	0	0.36	0.9057	0.1653	0.8531	1.9256	22359	916	856	1772	714502	681562	445902	550482	1	2392449	0.3	0.28	0.19	0.23	0.42	0.8717	0.3035	0.7555	1.9451	0	1531871	1854983	834486	895280	50868	5167488	0.28	0.39	0.16	0.17	0.33	0.8658	0.3063	0.7519	1.8721	138	136	274	118570	126170	65417	68620	378777	0.31	0.33	0.18	0.19	0	0.36	0.8713	0.2894	0.7644	1.9092	0	258831	286002	133574	137172	22386	837965	0.3	0.4	0.14	0.16	0.01	0.3	0.8643	0.3019	0.7551	1.8399	22	18	40	568	732	736	936	2972	0.19	0.25	0.25	0.32	0.56	0.8824	0.2899	0.7569	1.9645	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	20925	23360	9161	13724	14856	18690	17762	20940	8761	13045	22702	25995	17894	4073	13075	12351	17427	12833	14015	20560	10538	13992	9305	24884	12415	6927	9097	20767	14248	16507	11495	18253	7433	12481	13853	9267	6752	4645	8091	6585	8932	2507	26052	6661	8531	19321	8422	16793	11723	13705	5387	3768	12669	12414	11179	12848	4130	3217	3810	4910	19098	4879	9249	5083
GCF_000188115.4	NC_015447	NC_015447.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 10; SL3.0; whole genome shotgun sequence.	20780471	20781927	10767689	10784657	2518649	65633393	0.32	0.32	0.16	0.16	0.04	0.33	0.9393	0.0008	0.9992	1.9066	1039	1135	2174	2823236	3163325	1549864	1727198	192360	9455983	0.3	0.33	0.17	0.19	0	0.36	0.9043	0.1638	0.8544	1.9257	5927	872	932	1804	655547	616265	407437	500432	0	2179681	0.3	0.28	0.19	0.23	0.42	0.8713	0.301	0.7571	1.9456	0	1354743	1615019	724194	777264	179286	4650506	0.28	0.39	0.16	0.17	0.32	0.8646	0.303	0.7537	1.8696	136	141	277	114938	121169	60732	65785	362624	0.32	0.32	0.17	0.19	0	0.36	0.8709	0.282	0.7697	1.9077	0	233973	259286	112902	121638	2831	730630	0.3	0.4	0.15	0.16	0	0.3	0.8672	0.2854	0.7675	1.8465	25	52	77	1115	1367	1398	1791	5671	0.2	0.24	0.25	0.32	0.56	0.8835	0.2826	0.7651	1.9639	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	19193	21021	8376	12768	13415	17056	16456	19310	7952	11748	20864	24181	15934	3844	11887	11325	15166	11353	12838	18631	9207	12730	8325	22909	10902	6394	7970	18220	13227	15272	10794	15790	6832	11541	13136	8959	6462	4212	7545	6065	8112	2392	23884	6331	7624	17570	7490	15472	10320	12716	4894	3564	11513	11387	10023	11809	3500	2965	3567	4733	17365	4591	7983	4636
GCF_000188115.4	NC_015448	NC_015448.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 11; SL3.0; whole genome shotgun sequence.	16700855	16726711	8684557	8628720	5856292	56597135	0.3	0.3	0.15	0.15	0.1	0.31	0.94	0.004	0.996	1.868	955	975	1930	2994130	3402632	1667257	1866243	154586	10084848	0.3	0.33	0.17	0.19	0.01	0.36	0.9057	0.1621	0.8554	1.9224	14033	830	810	1640	660923	623076	407866	505794	0	2197659	0.3	0.28	0.19	0.23	0.42	0.8715	0.3004	0.7572	1.9458	0	1637212	1965724	889893	963511	122824	5579164	0.28	0.39	0.16	0.17	0.33	0.8667	0.2984	0.757	1.8703	98	109	207	86275	92312	45688	49978	274253	0.32	0.32	0.17	0.19	0	0.36	0.869	0.2971	0.7598	1.9083	0	140008	161828	70183	74480	14298	460797	0.3	0.4	0.14	0.15	0.01	0.3	0.8636	0.2893	0.7648	1.8379	14	23	37	550	667	669	873	2759	0.2	0.24	0.24	0.32	0.56	0.8903	0.2526	0.7836	1.9705	0	10	10	398	368	370	424	1560	0.26	0.24	0.24	0.27	0	0.51	0.8611	0.1097	0.8976	1.9964	19566	21674	8536	12663	13706	17236	16509	19271	7985	12262	20339	24365	16344	3751	12118	11475	15593	11454	12793	18754	9828	12679	8413	22895	11233	6200	8222	18780	13059	15389	10633	16291	6845	11598	13046	8782	6407	4044	7580	5761	8180	2258	24322	5931	7676	17593	7455	15521	10650	12427	4910	3475	11826	11308	10221	11806	3663	3056	3566	4792	17725	4632	8482	4572
GCF_000188115.4	NC_015449	NC_015449.3	Solanum lycopersicum cultivar Heinz 1706 chromosome 12; SL3.0; whole genome shotgun sequence.	20410259	20429269	10604909	10682127	5999612	68126176	0.3	0.3	0.16	0.16	0.09	0.31	0.9396	0.0041	0.9959	1.8789	1109	990	2099	2917281	3284572	1603137	1787272	146683	9738945	0.3	0.34	0.17	0.19	0	0.36	0.9038	0.1675	0.8517	1.9228	3454	911	825	1736	654522	618003	403421	495216	20	2171182	0.3	0.28	0.18	0.23	0.42	0.8708	0.3049	0.7545	1.9448	0	1513677	1798478	810487	871806	100069	5094517	0.28	0.39	0.16	0.17	0.32	0.8652	0.3017	0.7546	1.8712	152	132	284	101461	109521	56706	60870	328558	0.31	0.33	0.17	0.19	0	0.36	0.8683	0.2948	0.7629	1.9088	0	188040	216820	95682	104396	22654	627592	0.29	0.4	0.15	0.16	0.01	0.3	0.8655	0.2899	0.764	1.844	28	28	56	809	994	1054	1304	4161	0.19	0.24	0.25	0.31	0.57	0.8804	0.2407	0.7955	1.966	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	19231	21472	8569	12520	13566	16698	16120	19209	7475	12069	20853	23677	16439	3634	11982	11393	15500	11240	12724	18554	9062	12713	8270	22601	10812	5919	8246	18409	13727	15409	10508	15915	6649	11579	13252	8493	6356	4015	8041	5692	7830	2253	23724	6108	7519	17603	7215	15086	10318	12459	5011	3350	11758	11514	9754	12313	3501	2700	3402	4625	17524	4534	7993	4674
NA	NC_035963	NC_035963.1	Solanum lycopersicum bio-material TGRC:LA1421 mitochondrion; complete genome.	122886	122262	100607	100502	0	446257	0.28	0.27	0.23	0.23	0	0.45	0.9473	0.0031	0.9969	1.993	41	29	70	16084	15881	13398	14972	0	60335	0.26	0.28	0.21	0.25	0	0.46	0.9029	0.2053	0.8214	1.9754	293	19	17	36	7841	8426	6051	6476	0	28794	0.28	0.3	0.2	0.22	0.42	0.902	0.198	0.8288	1.9673	293	4747	4172	4382	4889	0	18190	0.26	0.22	0.24	0.27	0.52	0.9236	0.1346	0.8761	1.9928	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	17	9	26	451	538	422	543	1954	0.23	0.27	0.22	0.28	0.49	0.8925	0.2137	0.8147	1.9804	3	2	5	1983	1682	1742	2218	7625	0.26	0.21	0.24	0.28	0	0.52	0.9172	0.1775	0.8409	1.9908	194	194	155	152	140	133	182	307	145	150	212	298	176	89	167	117	194	113	282	326	86	204	109	217	85	120	129	182	201	226	188	220	97	170	118	99	67	94	76	120	111	64	276	92	86	172	138	189	93	174	148	80	193	171	119	144	32	93	92	120	191	56	47	177
NA	NC_007898	NC_007898.3	Solanum lycopersicum chloroplast; complete genome.	47640	48961	29924	28936	0	155461	0.31	0.31	0.19	0.19	0	0.38	0.9373	0.0305	0.97	1.9569	59	81	140	31256	30850	18893	22155	0	103154	0.28	0.29	0.2	0.24	0	0.44	0.892	0.2345	0.7998	1.9511	194	30	53	83	23698	24123	13852	15850	0	77523	0.3	0.31	0.17	0.21	0.39	0.8887	0.2676	0.7801	1.9305	194	2586	2430	1209	1504	0	7729	0.33	0.31	0.16	0.2	0.35	0.899	0.1421	0.7812	1.9295	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	25	20	45	626	690	668	811	2795	0.23	0.24	0.24	0.29	0.53	0.8798	0.2392	0.8002	1.9681	4	4	8	2352	1698	2148	2870	9068	0.26	0.2	0.23	0.31	0	0.54	0.9103	0.2805	0.7571	1.9788	597	376	526	519	396	359	600	1066	323	484	953	1001	401	149	402	305	570	187	523	917	189	551	191	830	236	259	374	571	735	686	441	584	171	655	395	215	145	200	190	238	121	101	1019	200	82	514	314	474	218	455	206	128	820	414	184	319	26	112	153	336	689	45	20	377