Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_020283565.1 | NC_060059 | NC_060059.1 | Trifolium pratense cultivar HEN17-A07 linkage group LG1; ARS_RC_1.1; whole genome shotgun sequence. | 17805227 | 17816929 | 9010047 | 8988232 | 15800 | 53636235 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.34 | 0.9414 | 0.0015 | 0.9985 | 1.9205 | 2601 | 2651 | 5252 | 6410054 | 7212547 | 3486161 | 3839639 | 1000 | 20949401 | 0.3 | 0.34 | 0.17 | 0.19 | 0 | 0.36 | 0.9033 | 0.1579 | 0.8595 | 1.927 | 33817 | 2257 | 2205 | 4462 | 1868102 | 1760813 | 1138808 | 1356229 | 0 | 6123952 | 0.3 | 0.29 | 0.18 | 0.23 | 0 | 0.41 | 0.8704 | 0.3077 | 0.753 | 1.9406 | 18 | 2867752 | 3523588 | 1437405 | 1541445 | 1000 | 9371190 | 0.29 | 0.41 | 0.14 | 0.15 | 0 | 0.3 | 0.8517 | 0.3223 | 0.7414 | 1.8389 | 19659 | 231 | 273 | 504 | 149992 | 175089 | 84255 | 93417 | 0 | 502753 | 0.3 | 0.33 | 0.17 | 0.2 | 0 | 0.37 | 0.864 | 0.3393 | 0.7309 | 1.9048 | 53 | 219515 | 267544 | 111593 | 121959 | 0 | 720611 | 0.28 | 0.43 | 0.14 | 0.15 | 0 | 0.29 | 0.8461 | 0.3734 | 0.7061 | 1.824 | 0 | 44 | 60 | 104 | 1504 | 1859 | 1895 | 2457 | 0 | 7715 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.56 | 0.8822 | 0.2828 | 0.7644 | 1.9632 | 0 | 41 | 97 | 138 | 57500 | 54701 | 55409 | 72142 | 0 | 239752 | 0.24 | 0.24 | 0.23 | 0.29 | 0 | 0.52 | 0.9117 | 0.1489 | 0.8653 | 1.991 | 0 | 53864 | 60082 | 21556 | 34936 | 36482 | 43835 | 43038 | 55854 | 22590 | 33218 | 61141 | 70037 | 45500 | 8874 | 31478 | 35220 | 44729 | 30719 | 36632 | 54640 | 23094 | 36958 | 24205 | 64752 | 27380 | 19922 | 22363 | 54582 | 36881 | 40251 | 29361 | 47106 | 17850 | 32703 | 38639 | 24313 | 18761 | 11293 | 20890 | 15959 | 20168 | 7120 | 72883 | 16072 | 21091 | 53113 | 17689 | 42213 | 29522 | 35553 | 12355 | 8811 | 33558 | 32152 | 25604 | 33645 | 10370 | 7890 | 10060 | 12850 | 52654 | 13593 | 22976 | 11519 |
GCF_020283565.1 | NC_060060 | NC_060060.1 | Trifolium pratense cultivar HEN17-A07 linkage group LG2; ARS_RC_1.1; whole genome shotgun sequence. | 24753352 | 24797410 | 12454950 | 12456596 | 19950 | 74482258 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.33 | 0.9369 | 0.001 | 0.999 | 1.9194 | 3840 | 3860 | 7700 | 8668338 | 9765142 | 4688247 | 5138274 | 1100 | 28261101 | 0.3 | 0.33 | 0.17 | 0.19 | 0 | 0.37 | 0.9027 | 0.1517 | 0.8646 | 1.93 | 63468 | 3036 | 3046 | 6082 | 2509383 | 2399725 | 1528016 | 1816938 | 0 | 8254062 | 0.3 | 0.29 | 0.18 | 0.23 | 0 | 0.41 | 0.8706 | 0.3047 | 0.7549 | 1.9406 | 73 | 3766712 | 4568485 | 1885292 | 2000186 | 600 | 12221275 | 0.29 | 0.41 | 0.14 | 0.15 | 0 | 0.3 | 0.851 | 0.3219 | 0.742 | 1.8382 | 0 | 409 | 396 | 805 | 280329 | 326046 | 153950 | 174554 | 0 | 934879 | 0.3 | 0.33 | 0.17 | 0.2 | 0 | 0.37 | 0.862 | 0.3372 | 0.7325 | 1.9053 | 136 | 361933 | 451887 | 176547 | 198743 | 0 | 1189110 | 0.28 | 0.42 | 0.14 | 0.16 | 0 | 0.3 | 0.8483 | 0.3735 | 0.7052 | 1.8267 | 0 | 63 | 61 | 124 | 1751 | 2220 | 2294 | 2904 | 0 | 9169 | 0.19 | 0.24 | 0.25 | 0.32 | 0 | 0.57 | 0.8788 | 0.2775 | 0.767 | 1.9619 | 0 | 281 | 334 | 615 | 16769 | 17140 | 18705 | 20571 | 0 | 73185 | 0.23 | 0.23 | 0.26 | 0.28 | 0 | 0.54 | 0.904 | 0.0675 | 0.9359 | 1.9944 | 0 | 72855 | 78447 | 28686 | 47872 | 48377 | 58023 | 58168 | 77828 | 30349 | 44895 | 83678 | 92912 | 59968 | 11767 | 42501 | 48281 | 61091 | 41067 | 49248 | 75737 | 30428 | 50605 | 32445 | 87592 | 35858 | 27297 | 30634 | 74723 | 50168 | 54676 | 39856 | 64945 | 24236 | 44900 | 51299 | 32649 | 24922 | 14489 | 28316 | 21552 | 27057 | 9078 | 97884 | 21443 | 29080 | 71641 | 23643 | 55141 | 40968 | 48428 | 16327 | 11668 | 47307 | 42855 | 34052 | 43632 | 13326 | 10623 | 13573 | 17525 | 71499 | 18205 | 29661 | 15562 |
GCF_020283565.1 | NC_060061 | NC_060061.1 | Trifolium pratense cultivar HEN17-A07 linkage group LG3; ARS_RC_1.1; whole genome shotgun sequence. | 18122634 | 18153715 | 9056055 | 9054953 | 13900 | 54401257 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.33 | 0.9415 | 0.0009 | 0.9991 | 1.9178 | 2903 | 2853 | 5756 | 6853940 | 7712824 | 3708290 | 4063584 | 1100 | 22339738 | 0.3 | 0.34 | 0.17 | 0.19 | 0 | 0.36 | 0.9027 | 0.1583 | 0.8594 | 1.9261 | 97776 | 2460 | 2457 | 4917 | 2100325 | 2010681 | 1280523 | 1520564 | 0 | 6912093 | 0.3 | 0.29 | 0.19 | 0.22 | 0 | 0.41 | 0.8702 | 0.3047 | 0.7553 | 1.9404 | 2 | 2905762 | 3558211 | 1446824 | 1544034 | 1100 | 9455931 | 0.29 | 0.41 | 0.14 | 0.15 | 0 | 0.3 | 0.8516 | 0.3212 | 0.7422 | 1.8392 | 0 | 338 | 314 | 652 | 177812 | 205115 | 99631 | 110332 | 0 | 592890 | 0.3 | 0.33 | 0.17 | 0.19 | 0 | 0.37 | 0.863 | 0.3238 | 0.7412 | 1.9074 | 247 | 243403 | 299669 | 126411 | 136394 | 0 | 805877 | 0.28 | 0.42 | 0.14 | 0.15 | 0 | 0.29 | 0.8472 | 0.3728 | 0.7074 | 1.8241 | 0 | 65 | 59 | 124 | 1865 | 2196 | 2317 | 2895 | 0 | 9273 | 0.2 | 0.24 | 0.25 | 0.31 | 0 | 0.56 | 0.8831 | 0.2473 | 0.7896 | 1.9677 | 0 | 1 | 0 | 1 | 29 | 29 | 29 | 32 | 0 | 119 | 0.24 | 0.24 | 0.24 | 0.27 | 0 | 0.51 | 0.9044 | 0.0492 | 0.9531 | 1.9986 | 0 | 60047 | 65958 | 24227 | 39938 | 40675 | 49792 | 48316 | 64767 | 25621 | 36572 | 69214 | 79608 | 50777 | 9746 | 35610 | 40207 | 51222 | 34585 | 41054 | 64297 | 25670 | 42006 | 27685 | 73890 | 28976 | 22241 | 25688 | 63710 | 42403 | 46079 | 33227 | 55636 | 19815 | 37953 | 42796 | 27865 | 20973 | 12565 | 23445 | 17916 | 22710 | 8006 | 82609 | 17731 | 23175 | 60479 | 19919 | 46374 | 33971 | 40246 | 13384 | 9635 | 39050 | 36965 | 28972 | 36931 | 10366 | 8608 | 10893 | 14982 | 59319 | 13967 | 23940 | 12774 |
GCF_020283565.1 | NC_060062 | NC_060062.1 | Trifolium pratense cultivar HEN17-A07 linkage group LG4; ARS_RC_1.1; whole genome shotgun sequence. | 20183119 | 20169430 | 10056928 | 10072794 | 14800 | 60497071 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.33 | 0.9384 | 0.0011 | 0.9989 | 1.9177 | 2795 | 2987 | 5782 | 6805176 | 7681356 | 3643627 | 4014528 | 3100 | 22147787 | 0.3 | 0.34 | 0.17 | 0.19 | 0 | 0.35 | 0.9013 | 0.1629 | 0.8552 | 1.923 | 51136 | 2408 | 2497 | 4905 | 2012752 | 1925440 | 1211090 | 1442367 | 0 | 6591649 | 0.3 | 0.29 | 0.18 | 0.22 | 0 | 0.41 | 0.8704 | 0.2994 | 0.7585 | 1.9402 | 0 | 2964241 | 3610811 | 1469869 | 1581021 | 2600 | 9628542 | 0.29 | 0.41 | 0.14 | 0.15 | 0 | 0.3 | 0.8522 | 0.3168 | 0.7455 | 1.8383 | 0 | 305 | 375 | 680 | 209341 | 245840 | 115320 | 128782 | 0 | 699283 | 0.3 | 0.33 | 0.17 | 0.19 | 0 | 0.36 | 0.8603 | 0.3472 | 0.7259 | 1.9008 | 403 | 265329 | 338312 | 129473 | 149545 | 0 | 882659 | 0.28 | 0.43 | 0.14 | 0.15 | 0 | 0.29 | 0.8448 | 0.39 | 0.6939 | 1.8183 | 0 | 45 | 81 | 126 | 1876 | 2201 | 2339 | 2935 | 0 | 9351 | 0.2 | 0.24 | 0.25 | 0.31 | 0 | 0.56 | 0.8882 | 0.2304 | 0.8009 | 1.9707 | 0 | 1 | 10 | 11 | 3154 | 3066 | 2991 | 3866 | 0 | 13077 | 0.24 | 0.24 | 0.23 | 0.28 | 0 | 0.51 | 0.9083 | 0.1348 | 0.8772 | 1.9929 | 0 | 56582 | 62410 | 23039 | 38071 | 37762 | 45961 | 45296 | 62363 | 23710 | 35339 | 68627 | 74977 | 49151 | 9763 | 34633 | 39392 | 48924 | 33102 | 39873 | 62288 | 23441 | 40188 | 25882 | 70346 | 27718 | 20941 | 24607 | 59541 | 41470 | 44690 | 31763 | 52295 | 18730 | 36049 | 41036 | 26462 | 19387 | 11304 | 22499 | 16371 | 21425 | 7242 | 78779 | 16640 | 22035 | 57254 | 18580 | 44518 | 33002 | 38482 | 13376 | 9303 | 38073 | 33747 | 26473 | 34945 | 10431 | 8130 | 11117 | 13970 | 57402 | 14086 | 23980 | 12190 |
GCF_020283565.1 | NC_060063 | NC_060063.1 | Trifolium pratense cultivar HEN17-A07 linkage group LG5; ARS_RC_1.1; whole genome shotgun sequence. | 19013010 | 19004486 | 9964977 | 9900881 | 24250 | 57907604 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.34 | 0.9322 | 0.0035 | 0.9966 | 1.9276 | 2190 | 2209 | 4399 | 5091325 | 5661880 | 2738048 | 3036984 | 550 | 16528787 | 0.3 | 0.33 | 0.17 | 0.19 | 0 | 0.36 | 0.902 | 0.166 | 0.8533 | 1.9271 | 24964 | 1757 | 1695 | 3452 | 1443478 | 1355676 | 857119 | 1030840 | 0 | 4687113 | 0.31 | 0.29 | 0.18 | 0.22 | 0 | 0.41 | 0.8701 | 0.3055 | 0.7546 | 1.9383 | 1 | 2189827 | 2615975 | 1094687 | 1169431 | 550 | 7070470 | 0.29 | 0.41 | 0.14 | 0.15 | 0 | 0.3 | 0.8515 | 0.3174 | 0.7451 | 1.8373 | 0 | 308 | 317 | 625 | 177284 | 200840 | 99772 | 110281 | 0 | 588177 | 0.3 | 0.33 | 0.17 | 0.2 | 0 | 0.37 | 0.8606 | 0.3531 | 0.7214 | 1.9065 | 5 | 292915 | 358794 | 149411 | 171775 | 0 | 972895 | 0.28 | 0.42 | 0.14 | 0.16 | 0 | 0.3 | 0.8502 | 0.3718 | 0.7058 | 1.8296 | 0 | 23 | 28 | 51 | 731 | 858 | 969 | 1185 | 0 | 3743 | 0.19 | 0.23 | 0.26 | 0.32 | 0 | 0.58 | 0.8855 | 0.2396 | 0.797 | 1.9645 | 0 | 78 | 148 | 226 | 30309 | 29200 | 29795 | 37769 | 0 | 127073 | 0.23 | 0.24 | 0.25 | 0.28 | 0 | 0.53 | 0.9074 | 0.0829 | 0.923 | 1.994 | 0 | 41350 | 45258 | 16751 | 27156 | 27758 | 32427 | 32102 | 43918 | 16159 | 25395 | 48244 | 54870 | 34294 | 6814 | 24367 | 26955 | 33889 | 23818 | 27437 | 43494 | 17119 | 28274 | 17230 | 50238 | 19989 | 15088 | 17315 | 41459 | 29292 | 30772 | 22557 | 35022 | 13356 | 25857 | 29474 | 18941 | 13794 | 8164 | 15766 | 11992 | 15030 | 5013 | 57918 | 11828 | 15332 | 40666 | 13012 | 32172 | 23380 | 27383 | 9578 | 6859 | 26637 | 25093 | 19706 | 24975 | 7367 | 5879 | 7917 | 9912 | 40963 | 10660 | 17881 | 8874 |
GCF_020283565.1 | NC_060064 | NC_060064.1 | Trifolium pratense cultivar HEN17-A07 linkage group LG6; ARS_RC_1.1; whole genome shotgun sequence. | 15428411 | 15430909 | 7631955 | 7635590 | 10750 | 46137615 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.33 | 0.9399 | 0.0003 | 0.9997 | 1.9158 | 2382 | 2327 | 4709 | 5646276 | 6418707 | 3036628 | 3337655 | 1050 | 18440316 | 0.3 | 0.34 | 0.17 | 0.19 | 0 | 0.35 | 0.9023 | 0.1613 | 0.8565 | 1.9225 | 53211 | 2040 | 1971 | 4011 | 1654603 | 1589702 | 1000531 | 1201230 | 0 | 5446066 | 0.3 | 0.29 | 0.18 | 0.23 | 0 | 0.41 | 0.8697 | 0.3067 | 0.7537 | 1.9394 | 12 | 2497432 | 3050642 | 1245361 | 1320661 | 1050 | 8115146 | 0.29 | 0.41 | 0.14 | 0.15 | 0 | 0.3 | 0.8521 | 0.3168 | 0.7453 | 1.8399 | 0 | 268 | 272 | 540 | 184883 | 220737 | 102432 | 115311 | 0 | 623363 | 0.3 | 0.33 | 0.17 | 0.2 | 0 | 0.36 | 0.8625 | 0.3312 | 0.7357 | 1.9031 | 273 | 215241 | 271539 | 107850 | 117300 | 0 | 711930 | 0.28 | 0.43 | 0.14 | 0.15 | 0 | 0.29 | 0.8455 | 0.39 | 0.6956 | 1.8199 | 0 | 44 | 61 | 105 | 1523 | 1871 | 1924 | 2466 | 0 | 7784 | 0.2 | 0.24 | 0.25 | 0.32 | 0 | 0.56 | 0.8859 | 0.2525 | 0.7831 | 1.969 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 47572 | 51329 | 19134 | 31022 | 31909 | 38305 | 38014 | 51243 | 19497 | 30136 | 54941 | 61240 | 40593 | 7462 | 28766 | 31701 | 40162 | 27279 | 33001 | 50459 | 20389 | 33017 | 21338 | 58036 | 23163 | 17832 | 20300 | 49989 | 33847 | 36552 | 26193 | 43403 | 15625 | 29655 | 34119 | 21072 | 16448 | 9400 | 17895 | 13833 | 18408 | 6077 | 63979 | 14112 | 18859 | 47884 | 15455 | 37366 | 27322 | 31683 | 10808 | 7440 | 30910 | 27717 | 23020 | 28528 | 9002 | 6704 | 8565 | 11367 | 46768 | 11832 | 20530 | 9897 |
GCF_020283565.1 | NC_060065 | NC_060065.1 | Trifolium pratense cultivar HEN17-A07 linkage group LG7; ARS_RC_1.1; whole genome shotgun sequence. | 19803022 | 19804360 | 9828006 | 9792194 | 14400 | 59241982 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.33 | 0.9384 | 0.0019 | 0.9981 | 1.9161 | 3061 | 2821 | 5882 | 7061504 | 7974918 | 3788875 | 4147008 | 1050 | 22973355 | 0.3 | 0.34 | 0.17 | 0.19 | 0 | 0.36 | 0.9026 | 0.159 | 0.8584 | 1.9242 | 49507 | 2632 | 2463 | 5095 | 2060275 | 1953250 | 1250409 | 1489267 | 0 | 6753201 | 0.3 | 0.29 | 0.19 | 0.23 | 0 | 0.41 | 0.8696 | 0.3067 | 0.7537 | 1.9402 | 1 | 3155445 | 3855168 | 1570923 | 1665785 | 1050 | 10248371 | 0.29 | 0.41 | 0.14 | 0.15 | 0 | 0.3 | 0.8515 | 0.3192 | 0.7439 | 1.8397 | 0 | 315 | 271 | 586 | 201491 | 238847 | 110250 | 126386 | 0 | 676974 | 0.3 | 0.33 | 0.17 | 0.2 | 0 | 0.37 | 0.864 | 0.3348 | 0.733 | 1.9052 | 84 | 220853 | 282147 | 103841 | 118544 | 0 | 725385 | 0.28 | 0.43 | 0.14 | 0.15 | 0 | 0.29 | 0.8456 | 0.3929 | 0.6927 | 1.8184 | 0 | 81 | 66 | 147 | 2156 | 2652 | 2708 | 3492 | 0 | 11008 | 0.2 | 0.24 | 0.25 | 0.32 | 0 | 0.56 | 0.8874 | 0.2551 | 0.7812 | 1.9691 | 0 | 0 | 2 | 2 | 54 | 62 | 56 | 66 | 0 | 238 | 0.23 | 0.26 | 0.24 | 0.28 | 0 | 0.51 | 0.9126 | 0.1511 | 0.8638 | 1.9917 | 0 | 58903 | 64110 | 23737 | 39371 | 40529 | 48522 | 48006 | 62646 | 24609 | 36607 | 68465 | 78075 | 50726 | 9738 | 34740 | 39405 | 49948 | 33718 | 40553 | 61710 | 24166 | 41603 | 26127 | 71690 | 29148 | 21734 | 24721 | 59007 | 41218 | 45466 | 32029 | 53524 | 19249 | 36374 | 42459 | 26735 | 20579 | 12114 | 22418 | 17398 | 22053 | 7713 | 80234 | 17308 | 23042 | 58820 | 19267 | 46547 | 33479 | 39682 | 13453 | 9483 | 37669 | 35665 | 27800 | 35628 | 10609 | 8289 | 11017 | 14262 | 59074 | 14218 | 24140 | 12927 |
NA | NC_048499 | NC_048499.1 | Trifolium pratense mitochondrion; complete genome. | 83058 | 82329 | 67757 | 68679 | 0 | 301823 | 0.28 | 0.27 | 0.22 | 0.23 | 0 | 0.45 | 0.9529 | 0.0112 | 0.9889 | 1.9933 | 33 | 19 | 52 | 13744 | 14019 | 11706 | 12811 | 0 | 52280 | 0.25 | 0.28 | 0.22 | 0.25 | 0 | 0.46 | 0.9055 | 0.1879 | 0.8352 | 1.9755 | 152 | 20 | 8 | 28 | 6586 | 7416 | 5148 | 5243 | 0 | 24393 | 0.27 | 0.31 | 0.21 | 0.21 | 0 | 0.41 | 0.9003 | 0.1971 | 0.8292 | 1.9632 | 152 | 3023 | 2608 | 2757 | 3140 | 0 | 11528 | 0.26 | 0.22 | 0.24 | 0.28 | 0 | 0.52 | 0.9216 | 0.1351 | 0.7664 | 1.9913 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 8 | 9 | 17 | 275 | 326 | 287 | 356 | 0 | 1244 | 0.22 | 0.26 | 0.23 | 0.29 | 0 | 0.52 | 0.8918 | 0.1946 | 0.8294 | 1.9814 | 0 | 3 | 0 | 3 | 1372 | 1168 | 1181 | 1521 | 0 | 5242 | 0.26 | 0.22 | 0.23 | 0.29 | 0 | 0.52 | 0.9235 | 0.1932 | 0.8252 | 1.9914 | 0 | 194 | 143 | 144 | 116 | 122 | 103 | 155 | 257 | 114 | 127 | 175 | 240 | 130 | 62 | 119 | 106 | 159 | 103 | 218 | 312 | 82 | 169 | 92 | 163 | 64 | 103 | 134 | 172 | 197 | 185 | 179 | 161 | 85 | 196 | 112 | 95 | 68 | 94 | 77 | 93 | 82 | 62 | 211 | 75 | 52 | 166 | 102 | 139 | 89 | 160 | 102 | 60 | 213 | 160 | 76 | 133 | 30 | 73 | 79 | 105 | 163 | 21 | 26 | 125 |
NA | NC_047412 | NC_047412.1 | Trifolium pratense plastid; complete genome. | 47569 | 48655 | 25485 | 24864 | 0 | 146573 | 0.32 | 0.33 | 0.17 | 0.17 | 0 | 0.34 | 0.9298 | 0.0236 | 0.9767 | 1.928 | 56 | 54 | 110 | 26363 | 26393 | 14815 | 17519 | 0 | 85090 | 0.29 | 0.3 | 0.19 | 0.22 | 0 | 0.41 | 0.8941 | 0.2189 | 0.8103 | 1.9427 | 53 | 38 | 34 | 72 | 19690 | 20155 | 10895 | 12650 | 0 | 63390 | 0.31 | 0.32 | 0.17 | 0.21 | 0 | 0.37 | 0.8883 | 0.2574 | 0.7877 | 1.9219 | 53 | 3160 | 2818 | 1309 | 1604 | 0 | 8891 | 0.35 | 0.32 | 0.15 | 0.18 | 0 | 0.33 | 0.8898 | 0.1621 | 0.8537 | 1.9061 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15 | 16 | 31 | 525 | 592 | 557 | 673 | 0 | 2347 | 0.22 | 0.25 | 0.24 | 0.29 | 0 | 0.52 | 0.8789 | 0.2388 | 0.802 | 1.9676 | 0 | 0 | 4 | 4 | 1197 | 869 | 1047 | 1416 | 0 | 4529 | 0.27 | 0.21 | 0.22 | 0.3 | 0 | 0.52 | 0.9119 | 0.2625 | 0.7704 | 1.9815 | 0 | 456 | 286 | 445 | 424 | 310 | 275 | 514 | 916 | 230 | 367 | 759 | 831 | 286 | 121 | 318 | 251 | 461 | 158 | 380 | 876 | 142 | 462 | 138 | 641 | 163 | 205 | 312 | 459 | 626 | 571 | 332 | 467 | 144 | 588 | 310 | 181 | 119 | 166 | 151 | 181 | 95 | 86 | 943 | 132 | 64 | 459 | 221 | 364 | 178 | 363 | 138 | 127 | 717 | 336 | 157 | 236 | 37 | 80 | 118 | 291 | 595 | 62 | 40 | 264 |