Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_000981445.1 | NC_027216 | NC_027216.1 | Babesia bigemina genome assembly Bbig001; chromosome : I. | 610900 | 609329 | 659711 | 661316 | 0 | 2541256 | 0.24 | 0.24 | 0.26 | 0.26 | 0 | 0.52 | 0.9584 | 0.0025 | 0.9975 | 1.9989 | 576 | 596 | 1172 | 449242 | 394570 | 473022 | 502700 | 0 | 1819534 | 0.25 | 0.22 | 0.26 | 0.27 | 0 | 0.53 | 0.9138 | 0.1558 | 0.8629 | 1.9798 | 32 | 576 | 596 | 1172 | 417427 | 354432 | 442125 | 466043 | 0 | 1680027 | 0.25 | 0.21 | 0.26 | 0.28 | 0 | 0.54 | 0.8849 | 0.2431 | 0.7994 | 1.9624 | 32 | 31815 | 40138 | 30897 | 36657 | 0 | 139507 | 0.23 | 0.28 | 0.22 | 0.27 | 0 | 0.49 | 0.8379 | 0.3938 | 0.6961 | 1.9309 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 13190 | 16569 | 5198 | 6251 | 10328 | 17377 | 9261 | 7054 | 7878 | 7158 | 7295 | 12707 | 7374 | 10941 | 5360 | 13110 | 5701 | 14033 | 12717 | 5787 | 15504 | 7724 | 9500 | 11523 | 12049 | 9464 | 4362 | 8944 | 5073 | 7625 | 10503 | 5829 | 9226 | 7072 | 7280 | 16436 | 9170 | 6630 | 10827 | 12155 | 10809 | 11122 | 10291 | 11994 | 9970 | 7317 | 6228 | 5553 | 4887 | 6218 | 10602 | 14104 | 3543 | 5748 | 8376 | 6963 | 1214 | 6545 | 9457 | 6853 | 8560 | 1526 | 3343 | 5745 |
GCF_000981445.1 | NC_027217 | NC_027217.1 | Babesia bigemina genome assembly Bbig001; chromosome : II. | 670412 | 673918 | 740782 | 738856 | 0 | 2823968 | 0.24 | 0.24 | 0.26 | 0.26 | 0 | 0.52 | 0.9584 | 0.0039 | 0.9961 | 1.9983 | 653 | 599 | 1252 | 499385 | 435127 | 535058 | 566416 | 0 | 2035986 | 0.25 | 0.22 | 0.26 | 0.28 | 0 | 0.53 | 0.9125 | 0.1627 | 0.8574 | 1.9767 | 19 | 653 | 599 | 1252 | 466903 | 393363 | 502516 | 528487 | 0 | 1891269 | 0.25 | 0.21 | 0.26 | 0.28 | 0 | 0.54 | 0.8849 | 0.249 | 0.7959 | 1.9591 | 19 | 32482 | 41764 | 32542 | 37929 | 0 | 144717 | 0.23 | 0.27 | 0.23 | 0.27 | 0 | 0.5 | 0.8403 | 0.3829 | 0.7033 | 1.9323 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 14286 | 19488 | 5811 | 6954 | 11365 | 20612 | 10169 | 7706 | 9162 | 8069 | 8008 | 13631 | 7800 | 12333 | 5767 | 15399 | 6459 | 16266 | 14049 | 6519 | 18494 | 8393 | 10694 | 12536 | 13853 | 10968 | 4663 | 9732 | 5543 | 8313 | 12492 | 6317 | 10520 | 7403 | 7964 | 19360 | 10403 | 7764 | 12014 | 14244 | 12297 | 12650 | 11803 | 14268 | 11019 | 8127 | 7098 | 5966 | 5179 | 6492 | 12262 | 16160 | 3828 | 6240 | 9188 | 7736 | 1302 | 7304 | 11008 | 7571 | 9132 | 1594 | 3753 | 6080 |
GCF_000981445.1 | NC_027218 | NC_027218.1 | Babesia bigemina genome assembly Bbig001; chromosome : III. | 859025 | 860309 | 900292 | 899133 | 0 | 3518759 | 0.24 | 0.24 | 0.26 | 0.26 | 0 | 0.51 | 0.96 | 0.0014 | 0.9986 | 1.9996 | 13 | 10 | 23 | 17332 | 14118 | 13211 | 14103 | 0 | 58764 | 0.28 | 0.24 | 0.23 | 0.25 | 0 | 0.48 | 0.9176 | 0.1819 | 0.8387 | 1.9866 | 0 | 12 | 10 | 22 | 16248 | 12933 | 12395 | 13066 | 0 | 54642 | 0.27 | 0.22 | 0.24 | 0.27 | 0 | 0.51 | 0.8803 | 0.3048 | 0.7593 | 1.9489 | 0 | 733 | 791 | 527 | 690 | 0 | 2741 | 0.27 | 0.28 | 0.18 | 0.26 | 0 | 0.44 | 0.8423 | 0.4645 | 0.6498 | 1.9206 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 351 | 605 | 206 | 284 | 332 | 475 | 315 | 395 | 238 | 165 | 523 | 558 | 210 | 292 | 217 | 463 | 215 | 323 | 364 | 253 | 365 | 328 | 352 | 553 | 331 | 283 | 189 | 335 | 271 | 252 | 333 | 331 | 253 | 282 | 272 | 539 | 291 | 132 | 344 | 319 | 259 | 137 | 741 | 300 | 261 | 313 | 197 | 211 | 191 | 253 | 216 | 309 | 208 | 153 | 177 | 168 | 13 | 86 | 185 | 143 | 390 | 27 | 29 | 92 |
GCF_000981445.1 | NC_027219 | NC_027219.1 | Babesia bigemina genome assembly Bbig001; chromosome : IV. | 221207 | 214505 | 228268 | 229622 | 0 | 893602 | 0.25 | 0.24 | 0.26 | 0.26 | 0 | 0.51 | 0.9571 | 0.0183 | 0.9819 | 1.9995 | 209 | 197 | 406 | 161716 | 142773 | 164855 | 174912 | 0 | 644256 | 0.25 | 0.22 | 0.25 | 0.27 | 0 | 0.53 | 0.915 | 0.1497 | 0.8674 | 1.9827 | 0 | 209 | 197 | 406 | 150499 | 128691 | 153828 | 162227 | 0 | 595245 | 0.25 | 0.22 | 0.26 | 0.28 | 0 | 0.53 | 0.8867 | 0.2379 | 0.8023 | 1.9673 | 0 | 11217 | 14082 | 11027 | 12685 | 0 | 49011 | 0.23 | 0.28 | 0.22 | 0.27 | 0 | 0.49 | 0.8417 | 0.3948 | 0.6959 | 1.9316 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 4500 | 5895 | 2091 | 2331 | 3863 | 5955 | 3308 | 2834 | 2774 | 2550 | 2914 | 4796 | 2693 | 3726 | 2097 | 4672 | 2335 | 4696 | 4198 | 2260 | 4939 | 2907 | 3159 | 4440 | 4206 | 3233 | 1671 | 3424 | 1996 | 2817 | 3467 | 2364 | 3131 | 2396 | 2860 | 5564 | 3224 | 2293 | 3757 | 4051 | 3681 | 3629 | 3828 | 4221 | 3220 | 2855 | 2207 | 1889 | 1692 | 2224 | 3626 | 4698 | 1415 | 2246 | 2760 | 2762 | 418 | 2157 | 3172 | 2499 | 3096 | 495 | 1079 | 1863 |
GCF_000981445.1 | NC_027220 | NC_027220.1 | Babesia bigemina genome assembly Bbig001; chromosome : V. | 122025 | 125856 | 122384 | 123474 | 0 | 493739 | 0.25 | 0.25 | 0.25 | 0.25 | 0 | 0.5 | 0.9566 | 0.0199 | 0.9804 | 1.9999 | 110 | 105 | 215 | 93393 | 85166 | 88851 | 95756 | 0 | 363166 | 0.26 | 0.23 | 0.25 | 0.26 | 0 | 0.51 | 0.917 | 0.1534 | 0.8637 | 1.9848 | 0 | 110 | 104 | 214 | 86384 | 76328 | 82136 | 87771 | 0 | 332619 | 0.26 | 0.22 | 0.25 | 0.27 | 0 | 0.52 | 0.8914 | 0.2301 | 0.8068 | 1.9703 | 0 | 6369 | 8375 | 6355 | 7411 | 0 | 28510 | 0.24 | 0.28 | 0.22 | 0.26 | 0 | 0.48 | 0.8392 | 0.3906 | 0.6974 | 1.9319 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2459 | 3045 | 1323 | 1415 | 2296 | 2952 | 1848 | 1799 | 1353 | 1502 | 1816 | 2806 | 1579 | 2003 | 1137 | 2407 | 1343 | 2515 | 2394 | 1540 | 2597 | 1724 | 1699 | 2772 | 2054 | 1688 | 1046 | 2105 | 1322 | 1690 | 1991 | 1390 | 1728 | 1735 | 1629 | 2881 | 1710 | 1208 | 2200 | 1997 | 1818 | 1806 | 2384 | 2150 | 1774 | 1816 | 1297 | 1126 | 1115 | 1427 | 1809 | 2218 | 914 | 1242 | 1463 | 1488 | 254 | 1025 | 1542 | 1374 | 1954 | 332 | 615 | 1073 |