Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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GCF_000165395.2 | NC_067396 | NC_067396.1 | Babesia bovis T2Bo chromosome 1; whole genome shotgun sequence. | 365337 | 355306 | 261983 | 263472 | 0 | 1246098 | 0.29 | 0.29 | 0.21 | 0.21 | 0 | 0.42 | 0.8575 | 0.0168 | 0.9834 | 1.9821 | 277 | 263 | 540 | 286731 | 264224 | 197628 | 227730 | 0 | 976313 | 0.3 | 0.28 | 0.2 | 0.23 | 0 | 0.42 | 0.9144 | 0.18 | 0.8412 | 1.9695 | 520 | 277 | 263 | 540 | 245692 | 217446 | 173432 | 199593 | 0 | 836163 | 0.3 | 0.26 | 0.2 | 0.24 | 0 | 0.44 | 0.8854 | 0.2676 | 0.7805 | 1.9571 | 124 | 19858 | 23821 | 10993 | 14629 | 0 | 69301 | 0.29 | 0.35 | 0.15 | 0.21 | 0 | 0.36 | 0.8148 | 0.4092 | 0.6873 | 1.877 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 7619 | 7847 | 5934 | 4919 | 5465 | 5618 | 4749 | 5388 | 3250 | 4495 | 6312 | 7286 | 5140 | 2955 | 4485 | 5516 | 4143 | 5864 | 4458 | 4741 | 4901 | 5042 | 2702 | 7392 | 4787 | 3945 | 4426 | 6118 | 5187 | 4461 | 3963 | 3532 | 2829 | 6915 | 5508 | 4861 | 3609 | 2423 | 4910 | 3315 | 3401 | 2089 | 6844 | 3002 | 3306 | 4834 | 2540 | 4355 | 3414 | 4371 | 2731 | 2190 | 4582 | 3323 | 4895 | 4635 | 2126 | 1727 | 2123 | 3582 | 4974 | 1931 | 2572 | 1734 |
GCF_000165395.2 | NC_010574 | NC_010574.1 | Babesia bovis T2Bo chromosome 2; whole genome shotgun sequence. | 502857 | 503657 | 361004 | 361901 | 0 | 1729419 | 0.29 | 0.29 | 0.21 | 0.21 | 0 | 0.42 | 0.9553 | 0.002 | 0.998 | 1.9805 | 416 | 427 | 843 | 447192 | 418091 | 301601 | 340952 | 0 | 1507836 | 0.3 | 0.28 | 0.2 | 0.22 | 0 | 0.42 | 0.915 | 0.1686 | 0.8507 | 1.9702 | 1455 | 416 | 425 | 841 | 372812 | 334794 | 259198 | 293265 | 0 | 1260069 | 0.3 | 0.26 | 0.2 | 0.23 | 0 | 0.44 | 0.8868 | 0.2656 | 0.7823 | 1.9571 | 46 | 28126 | 34162 | 14883 | 19356 | 0 | 96527 | 0.3 | 0.35 | 0.15 | 0.2 | 0 | 0.35 | 0.8117 | 0.4149 | 0.6843 | 1.8726 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11709 | 11465 | 8180 | 7403 | 7991 | 8666 | 7376 | 8807 | 4468 | 6289 | 9851 | 11886 | 7568 | 4424 | 6503 | 8372 | 6488 | 7498 | 6716 | 7883 | 6833 | 7714 | 3892 | 11974 | 6614 | 5282 | 6555 | 9337 | 8292 | 6567 | 6203 | 5859 | 4574 | 10291 | 8379 | 7543 | 5174 | 3208 | 7247 | 4781 | 5190 | 3458 | 10975 | 4456 | 5194 | 7781 | 3208 | 6083 | 5509 | 6810 | 4168 | 3377 | 7311 | 5266 | 5954 | 7057 | 2518 | 2359 | 2994 | 5865 | 8175 | 2832 | 3962 | 2947 |
GCF_000165395.2 | NC_010575 | NC_010575.1 | Babesia bovis T2Bo chromosome 3; whole genome shotgun sequence. | 756736 | 753070 | 542403 | 541111 | 0 | 2593320 | 0.29 | 0.29 | 0.21 | 0.21 | 0 | 0.42 | 0.9557 | 0.0036 | 0.9964 | 1.9804 | 636 | 635 | 1271 | 658300 | 618705 | 446268 | 502451 | 0 | 2225724 | 0.3 | 0.28 | 0.2 | 0.22 | 0 | 0.42 | 0.9151 | 0.1777 | 0.8437 | 1.969 | 3099 | 636 | 634 | 1270 | 551930 | 498242 | 385150 | 435287 | 0 | 1870609 | 0.3 | 0.26 | 0.2 | 0.23 | 0 | 0.44 | 0.8849 | 0.2671 | 0.7806 | 1.9566 | 116 | 40231 | 50352 | 21344 | 27515 | 0 | 139442 | 0.3 | 0.36 | 0.15 | 0.2 | 0 | 0.35 | 0.8093 | 0.4097 | 0.6877 | 1.8698 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17235 | 17453 | 12167 | 11230 | 11917 | 13025 | 11179 | 13143 | 6379 | 9098 | 14815 | 16816 | 11390 | 6755 | 9688 | 12566 | 9489 | 11311 | 10163 | 11472 | 10386 | 11624 | 5865 | 18142 | 10264 | 7974 | 9832 | 13750 | 12052 | 9245 | 8997 | 9130 | 6412 | 15703 | 12253 | 11647 | 7570 | 4476 | 10944 | 7049 | 7639 | 5348 | 15938 | 6552 | 7514 | 11771 | 4506 | 8744 | 7977 | 10132 | 6491 | 5066 | 11154 | 7565 | 8914 | 9893 | 3547 | 3610 | 4602 | 9172 | 11954 | 4054 | 5402 | 4356 |
NA | NC_009902 | NC_009902.1 | Babesia bovis T2Bo mitochondrion; complete genome. | 2106 | 2127 | 889 | 883 | 0 | 6005 | 0.35 | 0.35 | 0.15 | 0.15 | 0 | 0.3 | 0.908 | 0.0083 | 0.9917 | 1.8752 | 3 | 5 | 8 | 1098 | 1523 | 513 | 677 | 0 | 3811 | 0.31 | 0.35 | 0.13 | 0.21 | 0 | 0.34 | 0.8623 | 0.3756 | 0.7188 | 1.8625 | 0 | 1 | 1 | 2 | 686 | 1046 | 331 | 463 | 0 | 2526 | 0.27 | 0.41 | 0.13 | 0.18 | 0 | 0.32 | 0.889 | 0.3745 | 0.6853 | 1.8709 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2 | 3 | 5 | 199 | 199 | 90 | 110 | 0 | 598 | 0.33 | 0.32 | 0.13 | 0.23 | 0 | 0.36 | 0.8509 | 0.4125 | 0.7109 | 1.8611 | 0 | 43 | 8 | 21 | 23 | 15 | 2 | 26 | 32 | 3 | 19 | 22 | 12 | 20 | 1 | 18 | 6 | 22 | 3 | 26 | 44 | 0 | 29 | 0 | 18 | 1 | 0 | 12 | 25 | 31 | 36 | 4 | 23 | 7 | 51 | 20 | 1 | 4 | 0 | 8 | 1 | 2 | 0 | 1 | 0 | 0 | 37 | 1 | 14 | 15 | 15 | 3 | 0 | 62 | 17 | 5 | 15 | 0 | 0 | 0 | 4 | 12 | 2 | 0 | 0 |
NA | NC_067219 | NC_067219.1 | Babesia bovis T2Bo apicoplast; complete genome. | 11957 | 14133 | 3791 | 3470 | 0 | 33351 | 0.36 | 0.42 | 0.11 | 0.1 | 0 | 0.22 | 0.8882 | 0.1276 | 0.8807 | 1.7517 | 0 | 56 | 56 | 11255 | 9473 | 2829 | 2920 | 0 | 26477 | 0.41 | 0.36 | 0.11 | 0.12 | 0 | 0.23 | 0.8313 | 0.1961 | 0.8295 | 1.7513 | 649 | 0 | 32 | 32 | 9985 | 8394 | 2543 | 2583 | 0 | 23505 | 0.43 | 0.36 | 0.11 | 0.11 | 0 | 0.21 | 0.8358 | 0.1655 | 0.8518 | 1.7311 | 40 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 24 | 24 | 657 | 664 | 191 | 269 | 0 | 1781 | 0.37 | 0.37 | 0.11 | 0.15 | 0 | 0.26 | 0.8304 | 0.232 | 0.8037 | 1.79 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 125 | 102 | 161 | 200 | 46 | 36 | 110 | 274 | 13 | 22 | 625 | 194 | 91 | 12 | 137 | 190 | 234 | 34 | 44 | 450 | 18 | 103 | 4 | 190 | 22 | 10 | 88 | 62 | 428 | 90 | 21 | 137 | 2 | 630 | 202 | 71 | 42 | 6 | 142 | 14 | 57 | 2 | 852 | 8 | 33 | 172 | 21 | 147 | 104 | 98 | 14 | 24 | 543 | 119 | 23 | 45 | 2 | 0 | 4 | 36 | 118 | 28 | 2 | 1 |