GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_N Number of 'N' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	fr_tRNA_N Frequency of 'N' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_000691945.2	NC_027205	NC_027205.1	Babesia microti strain RI chromosome I; complete genome.	412661	418784	235914	236922	0	1304281	0.32	0.32	0.18	0.18	0.36	0.9473	0.0095	0.9906	1.9447	337	363	700	354590	316287	192633	213146	0	1076656	0.33	0.29	0.18	0.2	0.38	0.9058	0.1715	0.8483	1.94	89	329	355	684	316955	274750	178930	197255	0	967890	0.33	0.28	0.18	0.21	0.39	0.8761	0.2685	0.7792	1.931	89	36886	40676	13087	15147	105796	0.34	0.37	0.11	0.17	0	0.29	0.7916	0.4935	0.6525	1.7774	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	5	8	13	175	210	259	331	975	0.18	0.22	0.27	0.34	0	0.6	0.8886	0.2685	0.7713	1.9505	2	0	2	45	45	73	73	236	0.19	0.19	0.31	0.31	0	0.62	0.8839	0.0359	0.9647	1.9588	7854	8090	4679	5485	4980	5124	3984	10808	3560	4385	12468	9663	6505	2503	4504	6196	4990	4068	4804	9228	3907	3729	2728	10287	4157	3305	5177	8276	7731	4899	5224	4492	2385	9186	6434	4600	3589	2760	5212	3534	3231	1870	13513	3523	3521	5331	3018	5238	4397	4979	2651	2118	7301	3305	4282	4944	2120	1330	1527	1886	7638	3524	3225	1873
GCF_000691945.2	NC_027206	NC_027206.1	Babesia microti strain RI chromosome II; complete genome.	484014	481859	271786	270624	102	1508385	0.32	0.32	0.18	0.18	0.36	0.9479	0.0044	0.9956	1.9423	424	430	854	416292	372055	223573	247199	2	1259121	0.34	0.29	0.18	0.2	0.37	0.9053	0.1676	0.8514	1.9377	141	420	424	844	368445	319418	206573	227778	2	1122216	0.33	0.28	0.18	0.2	0.38	0.8745	0.274	0.7758	1.9269	141	47636	52413	16790	19170	136009	0.35	0.37	0.11	0.17	0	0.28	0.7909	0.4814	0.6599	1.7749	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	5	9	122	159	168	211	660	0.19	0.24	0.25	0.32	0	0.57	0.9001	0.2465	0.7822	1.969	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	8651	9382	5435	6563	5902	6149	4669	12767	4223	5016	14976	11175	7802	3011	5317	7169	5927	4804	5300	10809	4697	4318	3030	12043	4549	3909	6309	9851	8800	5594	5868	5166	2803	11118	7637	5276	4007	3066	6184	4018	3717	2094	15694	4069	3951	6224	3439	6078	4897	5772	2828	2516	8633	3892	5179	5672	2095	1549	1761	2156	8573	3738	3255	2053
GCF_000691945.2	NC_027207	NC_027207.2	Babesia microti strain RI chromosome III; complete genome.	561201	561583	325814	317811	0	1766409	0.32	0.32	0.18	0.18	0.36	0.9491	0.0128	0.9874	1.9462	512	512	1024	469470	420799	262695	285877	0	1438841	0.33	0.29	0.18	0.2	0.38	0.9059	0.1615	0.8566	1.9424	855	504	505	1009	417234	364146	241813	262934	0	1286127	0.33	0.28	0.18	0.21	0.39	0.8774	0.2626	0.7842	1.9316	418	47757	52182	17401	19373	136713	0.34	0.37	0.12	0.17	0	0.29	0.7927	0.4772	0.6601	1.7859	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	6	10	121	178	188	254	741	0.16	0.24	0.25	0.34	0	0.6	0.8722	0.3556	0.7081	1.9412	4	0	4	4008	4024	3179	3174	14385	0.28	0.28	0.22	0.22	0	0.45	0.9339	0.1332	0.8789	1.9868	9991	10529	6146	7403	6954	6966	5508	14408	4821	5740	16836	12731	8803	3301	6165	8201	7006	5483	6160	12197	5633	5102	3840	13704	5540	4645	7123	10975	9776	6437	7010	5867	3487	12361	8534	6270	4654	3689	6934	4918	4375	2558	17417	4873	4701	7042	4033	6556	5795	6547	3403	2893	9511	4474	5560	6472	2383	1872	2144	2506	10154	4217	3854	2499
GCF_000691945.2	NC_034969	NC_034969.1	Babesia microti strain RI chromosome IV; complete genome.	579118	576635	330700	329753	0	1816206	0.32	0.32	0.18	0.18	0.36	0.9475	0.0036	0.9964	1.9457	530	509	1039	489797	439071	271408	296131	0	1496407	0.33	0.29	0.18	0.2	0.37	0.9039	0.1652	0.8535	1.936	234	522	504	1026	441252	386059	254410	276160	0	1357881	0.33	0.29	0.18	0.2	0.38	0.8752	0.2696	0.7796	1.9248	234	48108	52659	16669	19579	137015	0.35	0.37	0.11	0.17	0	0.28	0.7865	0.4859	0.6581	1.7695	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	7	5	12	184	207	232	285	908	0.2	0.23	0.26	0.31	0	0.57	0.8835	0.2293	0.7994	1.9435	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10349	10883	6385	7605	7038	7256	5734	15396	5218	5959	18054	13567	9222	3517	6320	8705	7482	5498	6687	13095	5979	5198	4064	14254	5519	4894	7577	11354	10516	6920	7489	6240	3593	12696	8819	6461	4886	3852	7304	5194	4523	2823	19051	5089	5247	7541	4400	7165	6155	7007	3684	3291	10363	4627	5897	6606	2451	1951	2305	2556	10562	4638	4278	2583
NA	NC_034637	NC_034637.1	Babesia microti strain RI mitochondrion; isoform 3 complete genome.	3460	3377	1884	1826	0	10547	0.33	0.32	0.18	0.17	0.35	0.9112	0.0278	0.9726	1.9355	5	6	11	1190	1317	694	702	0	3903	0.31	0.3	0.2	0.19	0.39	0.858	0.2331	0.8155	1.9275	3	0	1	1	415	496	257	278	0	1446	0.29	0.34	0.18	0.19	0.37	0.9003	0.1282	0.8806	1.9467	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	4	4	8	220	207	128	129	684	0.32	0.28	0.2	0.2	0	0.4	0.8453	0.2858	0.7792	1.9259	15	4	17	16	16	3	9	15	4	8	5	5	5	1	12	11	7	7	14	16	4	18	0	10	4	3	20	15	13	12	12	10	9	30	19	3	6	2	5	3	5	0	2	5	1	9	0	9	9	5	0	3	23	4	2	12	1	0	0	0	3	0	1	0
NA	NC_034636	NC_034636.1	Babesia microti strain RI apicoplast complete genome.	13355	11272	1635	2395	0	28657	0.47	0.39	0.06	0.08	0.14	0.8611	0.2732	0.7634	1.5778	57	0	57	12423	10550	1578	2331	0	26882	0.44	0.39	0.07	0.1	0.17	0.7921	0.3439	0.7267	1.5903	45	17	0	17	5954	5145	570	916	0	12585	0.48	0.4	0.04	0.08	0.12	0.7602	0.4963	0.6413	1.4781	32	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	24	0	24	648	673	171	241	1733	0.38	0.39	0.1	0.14	0	0.23	0.8268	0.2197	0.7973	1.7261	2	0	2	1788	1467	391	575	4221	0.42	0.34	0.09	0.14	0	0.23	0.8634	0.2913	0.7485	1.7723	42	25	42	62	10	11	13	291	3	10	686	78	86	1	87	11	95	1	1	331	1	88	0	98	0	0	7	10	327	35	1	16	0	378	58	4	2	1	8	0	1	0	558	1	4	52	2	71	51	26	1	2	388	26	6	26	0	0	1	3	39	10	7	0