| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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| NA | NC_015329 | NC_015329.1 | Cryptomonas paramecium strain CCAP977/2A chromosome 1; complete sequence. | 66820 | 64887 | 22831 | 22800 | 0 | 177338 | 0.38 | 0.37 | 0.13 | 0.13 | 0 | 0.26 | 0.9145 | 0.0154 | 0.9849 | 1.8225 | 85 | 101 | 186 | 61910 | 56426 | 19767 | 22255 | 0 | 160358 | 0.38 | 0.35 | 0.13 | 0.14 | 0 | 0.27 | 0.865 | 0.1857 | 0.8379 | 1.8112 | 42 | 81 | 91 | 172 | 59943 | 54265 | 18641 | 20607 | 0 | 153456 | 0.39 | 0.35 | 0.12 | 0.13 | 0 | 0.25 | 0.863 | 0.179 | 0.8432 | 1.7987 | 3 | 36 | 50 | 2 | 12 | 0 | 100 | 0.36 | 0.5 | 0.02 | 0.12 | 0 | 0.14 | 0.708 | 0.8771 | 0.4433 | 1.5106 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 3 | 6 | 9 | 154 | 201 | 128 | 181 | 0 | 664 | 0.23 | 0.3 | 0.19 | 0.27 | 0 | 0.46 | 0.8904 | 0.309 | 0.738 | 1.973 | 0 | 1 | 4 | 5 | 1777 | 1910 | 996 | 1455 | 0 | 6138 | 0.28 | 0.28 | 0.2 | 0.25 | 0 | 0.45 | 0.8893 | 0.1683 | 0.8556 | 1.9698 | 0 | 991 | 699 | 745 | 793 | 488 | 249 | 511 | 2465 | 216 | 392 | 2944 | 1961 | 905 | 268 | 648 | 993 | 1218 | 240 | 762 | 4093 | 247 | 451 | 195 | 1249 | 285 | 234 | 493 | 1073 | 1858 | 904 | 705 | 709 | 258 | 2274 | 883 | 386 | 256 | 111 | 583 | 111 | 256 | 77 | 5742 | 136 | 304 | 1002 | 184 | 908 | 821 | 669 | 426 | 149 | 2499 | 470 | 194 | 301 | 23 | 69 | 167 | 289 | 1201 | 124 | 27 | 267 |
| NA | NC_015330 | NC_015330.1 | Cryptomonas paramecium strain CCAP977/2A chromosome 2; complete sequence. | 59048 | 59343 | 21093 | 20705 | 0 | 160189 | 0.37 | 0.37 | 0.13 | 0.13 | 0 | 0.26 | 0.9174 | 0.0118 | 0.9883 | 1.8281 | 83 | 88 | 171 | 54457 | 48883 | 17496 | 20370 | 0 | 141206 | 0.38 | 0.34 | 0.13 | 0.15 | 0 | 0.27 | 0.8637 | 0.1908 | 0.8341 | 1.8165 | 4 | 75 | 80 | 155 | 52440 | 46712 | 16332 | 18691 | 0 | 134175 | 0.39 | 0.35 | 0.12 | 0.14 | 0 | 0.26 | 0.8617 | 0.1897 | 0.835 | 1.8004 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 1 | 0 | 1 | 24 | 28 | 13 | 19 | 0 | 84 | 0.29 | 0.33 | 0.15 | 0.23 | 0 | 0.38 | 0.8747 | 0.2644 | 0.7707 | 1.9463 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 6 | 4 | 10 | 183 | 216 | 147 | 199 | 0 | 745 | 0.25 | 0.29 | 0.2 | 0.26 | 0 | 0.46 | 0.8696 | 0.3127 | 0.7418 | 1.964 | 0 | 1 | 4 | 5 | 1777 | 1910 | 996 | 1455 | 0 | 6138 | 0.28 | 0.28 | 0.2 | 0.25 | 0 | 0.45 | 0.8893 | 0.1683 | 0.8556 | 1.9698 | 0 | 837 | 616 | 655 | 716 | 509 | 233 | 478 | 2235 | 201 | 346 | 2504 | 1788 | 745 | 272 | 548 | 867 | 1047 | 248 | 670 | 3320 | 190 | 414 | 162 | 1199 | 272 | 204 | 463 | 901 | 1460 | 818 | 593 | 624 | 211 | 2043 | 792 | 338 | 193 | 92 | 423 | 107 | 234 | 77 | 4960 | 138 | 289 | 939 | 190 | 805 | 733 | 587 | 358 | 148 | 2243 | 450 | 161 | 254 | 21 | 63 | 126 | 233 | 1039 | 96 | 38 | 209 |
| NA | NC_015331 | NC_015331.1 | Cryptomonas paramecium strain CCAP977/2A chromosome 3; complete sequence. | 53980 | 55418 | 20234 | 19907 | 0 | 149539 | 0.36 | 0.37 | 0.14 | 0.13 | 0 | 0.27 | 0.9155 | 0.0213 | 0.9789 | 1.8391 | 62 | 96 | 158 | 49814 | 45165 | 16815 | 19558 | 0 | 131352 | 0.38 | 0.34 | 0.13 | 0.15 | 0 | 0.29 | 0.8703 | 0.1956 | 0.8307 | 1.8322 | 28 | 53 | 86 | 139 | 46075 | 41086 | 14722 | 16461 | 0 | 118344 | 0.39 | 0.34 | 0.12 | 0.14 | 0 | 0.27 | 0.8679 | 0.1845 | 0.8392 | 1.8148 | 0 | 22 | 29 | 4 | 7 | 0 | 62 | 0.35 | 0.47 | 0.06 | 0.11 | 0 | 0.18 | 0.75 | 0.41 | 0.665 | 1.6535 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5 | 6 | 11 | 196 | 267 | 154 | 221 | 0 | 838 | 0.23 | 0.32 | 0.18 | 0.26 | 0 | 0.45 | 0.8857 | 0.3372 | 0.7199 | 1.9611 | 0 | 4 | 4 | 8 | 3521 | 3783 | 1935 | 2869 | 0 | 12108 | 0.29 | 0.29 | 0.18 | 0.24 | 0 | 0.43 | 0.8912 | 0.1972 | 0.8323 | 1.9631 | 0 | 698 | 647 | 587 | 569 | 417 | 200 | 409 | 1840 | 202 | 328 | 2167 | 1523 | 664 | 271 | 473 | 750 | 963 | 237 | 595 | 3067 | 160 | 368 | 167 | 996 | 220 | 198 | 378 | 860 | 1322 | 687 | 508 | 576 | 166 | 1653 | 774 | 279 | 193 | 88 | 464 | 93 | 226 | 66 | 4413 | 135 | 226 | 797 | 159 | 756 | 607 | 542 | 324 | 121 | 1838 | 390 | 147 | 218 | 23 | 54 | 112 | 243 | 936 | 107 | 40 | 210 |
| NA | NC_013703 | NC_013703.1 | Cryptomonas paramecium plastid; complete genome. | 22999 | 25074 | 14385 | 15256 | 2 | 77716 | 0.3 | 0.32 | 0.19 | 0.2 | 0 | 0.38 | 0.8457 | 0.0725 | 0.9301 | 1.958 | 69 | 46 | 115 | 23978 | 17403 | 12696 | 14091 | 0 | 68168 | 0.32 | 0.26 | 0.19 | 0.22 | 0 | 0.42 | 0.8892 | 0.3229 | 0.7391 | 1.9309 | 1 | 56 | 26 | 82 | 22164 | 15732 | 11216 | 12117 | 0 | 61229 | 0.36 | 0.26 | 0.18 | 0.2 | 0 | 0.38 | 0.8905 | 0.3615 | 0.7121 | 1.9151 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 13 | 16 | 29 | 492 | 565 | 529 | 623 | 0 | 2209 | 0.22 | 0.25 | 0.24 | 0.28 | 0 | 0.52 | 0.8883 | 0.2111 | 0.8161 | 1.9771 | 0 | 0 | 3 | 3 | 1195 | 1066 | 907 | 1325 | 0 | 4493 | 0.26 | 0.24 | 0.21 | 0.29 | 0 | 0.5 | 0.9145 | 0.1973 | 0.8266 | 1.9896 | 0 | 424 | 386 | 474 | 443 | 496 | 334 | 441 | 613 | 184 | 130 | 522 | 969 | 324 | 126 | 188 | 425 | 415 | 202 | 256 | 481 | 132 | 295 | 137 | 492 | 182 | 197 | 452 | 271 | 319 | 577 | 326 | 408 | 153 | 775 | 566 | 328 | 205 | 85 | 264 | 170 | 221 | 100 | 1377 | 198 | 123 | 474 | 263 | 469 | 106 | 221 | 92 | 127 | 642 | 279 | 196 | 374 | 12 | 34 | 51 | 126 | 565 | 57 | 13 | 122 |