| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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| GCF_000003225.4 | NC_011129 | NC_011129.2 | Theileria annulata chromosome 1; complete sequence; *** SEQUENCING IN PROGRESS ***. | 869273 | 870643 | 426215 | 426388 | 1 | 2592520 | 0.34 | 0.34 | 0.16 | 0.16 | 0 | 0.33 | 0.9399 | 0.001 | 0.999 | 1.9138 | 565 | 590 | 1155 | 749281 | 645418 | 351795 | 388518 | 1 | 2135013 | 0.35 | 0.3 | 0.17 | 0.18 | 0 | 0.35 | 0.8969 | 0.1714 | 0.8486 | 1.9149 | 0 | 565 | 589 | 1154 | 665239 | 547747 | 325097 | 359857 | 1 | 1897941 | 0.35 | 0.29 | 0.17 | 0.19 | 0 | 0.36 | 0.8664 | 0.2964 | 0.7606 | 1.9013 | 0 | 83814 | 97504 | 26511 | 28539 | 0 | 236368 | 0.36 | 0.42 | 0.1 | 0.12 | 0 | 0.22 | 0.7659 | 0.4599 | 0.6676 | 1.7008 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 13988 | 18311 | 10181 | 13520 | 7144 | 11701 | 6609 | 19343 | 5948 | 7506 | 26524 | 23220 | 15913 | 4603 | 11168 | 15345 | 10252 | 7081 | 11008 | 18869 | 7563 | 8099 | 6392 | 19788 | 8141 | 6871 | 9063 | 13175 | 15818 | 11073 | 8251 | 10129 | 4837 | 18316 | 13895 | 9091 | 6252 | 3134 | 10080 | 4044 | 4907 | 1604 | 29349 | 3517 | 3905 | 12972 | 3231 | 13074 | 8215 | 8179 | 4276 | 1886 | 16957 | 7048 | 7544 | 9940 | 3496 | 1581 | 2435 | 2880 | 14740 | 8171 | 6164 | 3056 |
| GCF_000003225.4 | NC_011099 | NC_011099.1 | Theileria annulata chromosome 2; complete sequence; *** SEQUENCING IN PROGRESS ***. | 663977 | 660233 | 326149 | 328811 | 0 | 1979170 | 0.34 | 0.33 | 0.16 | 0.17 | 0 | 0.33 | 0.9396 | 0.0069 | 0.9931 | 1.9159 | 477 | 468 | 945 | 570239 | 486761 | 275849 | 294414 | 0 | 1627263 | 0.35 | 0.3 | 0.17 | 0.18 | 0 | 0.35 | 0.8961 | 0.1807 | 0.8413 | 1.9139 | 23 | 477 | 468 | 945 | 515597 | 422937 | 258613 | 276099 | 0 | 1473246 | 0.35 | 0.29 | 0.17 | 0.19 | 0 | 0.36 | 0.8687 | 0.295 | 0.7615 | 1.9046 | 23 | 54642 | 63824 | 17236 | 18315 | 0 | 154017 | 0.36 | 0.42 | 0.1 | 0.12 | 0 | 0.22 | 0.7641 | 0.4603 | 0.6661 | 1.7015 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10268 | 14501 | 7862 | 10977 | 5552 | 8637 | 4884 | 14426 | 4812 | 5582 | 20542 | 18089 | 12434 | 3547 | 8265 | 12266 | 8182 | 5237 | 9030 | 14744 | 6065 | 6041 | 5190 | 15701 | 6039 | 5732 | 6983 | 9925 | 12221 | 9003 | 6745 | 8060 | 4016 | 13490 | 10939 | 7276 | 4927 | 2681 | 7900 | 3173 | 3869 | 1286 | 23040 | 2719 | 2994 | 10217 | 2516 | 9810 | 6067 | 6421 | 3482 | 1407 | 12573 | 5597 | 5601 | 7984 | 2521 | 1176 | 1830 | 2265 | 11548 | 6020 | 4700 | 2558 |
| GCF_000003225.4 | NC_011100 | NC_011100.1 | Theileria annulata chromosome 3; complete sequence; *** SEQUENCING IN PROGRESS ***. | 645931 | 648013 | 302987 | 301811 | 200 | 1898942 | 0.34 | 0.34 | 0.16 | 0.16 | 0 | 0.32 | 0.9357 | 0.0036 | 0.9965 | 1.9027 | 417 | 417 | 834 | 545701 | 474299 | 247260 | 269199 | 0 | 1536459 | 0.35 | 0.31 | 0.16 | 0.18 | 0 | 0.34 | 0.893 | 0.1762 | 0.8446 | 1.9035 | 0 | 417 | 417 | 834 | 478413 | 395410 | 222683 | 245442 | 0 | 1341948 | 0.36 | 0.29 | 0.16 | 0.18 | 0 | 0.35 | 0.861 | 0.2956 | 0.7615 | 1.8862 | 0 | 67288 | 78889 | 24577 | 23757 | 0 | 194511 | 0.36 | 0.42 | 0.11 | 0.12 | 0 | 0.22 | 0.7697 | 0.4419 | 0.6775 | 1.7015 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 2 | 0 | 2 | 23 | 33 | 42 | 48 | 0 | 146 | 0.16 | 0.23 | 0.29 | 0.33 | 0 | 0.62 | 0.8929 | 0.245 | 0.7866 | 1.9489 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 9780 | 12531 | 7331 | 9722 | 4467 | 7483 | 4355 | 15084 | 4213 | 5305 | 20032 | 16149 | 10834 | 3116 | 7788 | 10390 | 6993 | 4751 | 7709 | 13712 | 5279 | 5827 | 4174 | 13697 | 5335 | 4966 | 6624 | 9250 | 12071 | 7691 | 6172 | 6881 | 3383 | 14414 | 9836 | 5732 | 4187 | 2171 | 6985 | 2495 | 3365 | 990 | 21617 | 2191 | 2457 | 8955 | 2170 | 8951 | 5685 | 6055 | 2825 | 1167 | 12731 | 4745 | 4950 | 6865 | 2713 | 1004 | 1553 | 1954 | 10555 | 6827 | 4986 | 2218 |
| GCF_000003225.4 | NC_011098 | NC_011098.1 | Theileria annulata chromosome 4; complete sequence; *** SEQUENCING IN PROGRESS ***. | 622852 | 627147 | 296310 | 295962 | 0 | 1842271 | 0.34 | 0.34 | 0.16 | 0.16 | 0 | 0.32 | 0.9367 | 0.004 | 0.996 | 1.906 | 421 | 427 | 848 | 537256 | 460440 | 245175 | 269274 | 0 | 1512145 | 0.35 | 0.31 | 0.16 | 0.18 | 0 | 0.34 | 0.8947 | 0.1807 | 0.8414 | 1.9091 | 0 | 421 | 427 | 848 | 478409 | 392152 | 226861 | 249911 | 0 | 1347333 | 0.35 | 0.29 | 0.17 | 0.19 | 0 | 0.35 | 0.8652 | 0.2953 | 0.7608 | 1.8979 | 0 | 58847 | 68288 | 18314 | 19363 | 0 | 164812 | 0.36 | 0.42 | 0.09 | 0.12 | 0 | 0.22 | 0.7593 | 0.481 | 0.6573 | 1.6814 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 1 | 1 | 13 | 15 | 19 | 26 | 0 | 73 | 0.18 | 0.21 | 0.26 | 0.36 | 0 | 0.62 | 0.8747 | 0.227 | 0.7987 | 1.9483 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10023 | 13273 | 7374 | 9677 | 5103 | 8119 | 4100 | 13949 | 4134 | 5153 | 19816 | 16697 | 11721 | 3252 | 7608 | 10825 | 7670 | 4787 | 8106 | 13495 | 5138 | 5367 | 4360 | 14150 | 5559 | 4698 | 6414 | 9301 | 11870 | 8050 | 6075 | 7145 | 3279 | 13498 | 10194 | 6269 | 4379 | 2136 | 7180 | 2494 | 3343 | 1047 | 21101 | 2139 | 2540 | 9064 | 2231 | 9376 | 5671 | 6164 | 3026 | 1182 | 12477 | 4829 | 5183 | 6810 | 2527 | 992 | 1613 | 1950 | 10370 | 5612 | 4322 | 2132 |
| GCF_000003225.4 | NT_167255 | NT_167255.1 | Theileria annulata strain Ankara isolate clone C9 mitochondrion; *** SEQUENCING IN PROGRESS ***. | 2057 | 2110 | 883 | 855 | 0 | 5905 | 0.35 | 0.36 | 0.15 | 0.14 | 0 | 0.29 | 0.9079 | 0.0288 | 0.9716 | 1.8741 | 1 | 2 | 3 | 991 | 1406 | 409 | 604 | 0 | 3410 | 0.3 | 0.41 | 0.12 | 0.17 | 0 | 0.29 | 0.8796 | 0.3441 | 0.711 | 1.8487 | 0 | 0 | 2 | 2 | 551 | 755 | 229 | 325 | 0 | 1860 | 0.31 | 0.38 | 0.08 | 0.23 | 0 | 0.31 | 0.9179 | 0.5399 | 0.6579 | 1.7613 | 0 | 12 | 11 | 4 | 4 | 0 | 31 | 0.39 | 0.35 | 0.13 | 0.13 | 0 | 0.26 | 0.8305 | 0.0435 | 0.9583 | 1.8228 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 26 | 3 | 19 | 10 | 11 | 2 | 13 | 28 | 4 | 12 | 21 | 19 | 13 | 0 | 10 | 7 | 15 | 6 | 15 | 43 | 2 | 14 | 2 | 13 | 1 | 1 | 6 | 19 | 26 | 22 | 1 | 14 | 2 | 33 | 15 | 4 | 3 | 0 | 4 | 3 | 2 | 0 | 12 | 2 | 0 | 30 | 3 | 11 | 4 | 14 | 4 | 0 | 42 | 6 | 0 | 10 | 0 | 0 | 0 | 3 | 12 | 2 | 0 | 1 |