| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| GCF_000165365.1 | NC_007344 | NC_007344.1 | Theileria parva strain Muguga chromosome 1; complete sequence; whole genome shotgun sequence. | 837214 | 835026 | 434977 | 432812 | 0 | 2540029 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.34 | 0.8532 | 0.0038 | 0.9962 | 1.9264 | 628 | 586 | 1214 | 793182 | 725135 | 397070 | 420008 | 0 | 2335395 | 0.34 | 0.32 | 0.17 | 0.18 | 0 | 0.34 | 0.8964 | 0.1424 | 0.8722 | 1.9155 | 2050 | 620 | 576 | 1196 | 618160 | 514644 | 329738 | 359750 | 0 | 1822292 | 0.34 | 0.28 | 0.18 | 0.2 | 0 | 0.37 | 0.8682 | 0.2961 | 0.761 | 1.9168 | 58 | 99997 | 122920 | 38257 | 33839 | 0 | 295013 | 0.34 | 0.43 | 0.11 | 0.12 | 0 | 0.23 | 0.7696 | 0.4498 | 0.6698 | 1.7202 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 7 | 8 | 15 | 192 | 258 | 292 | 372 | 0 | 1114 | 0.17 | 0.23 | 0.26 | 0.33 | 0 | 0.6 | 0.8805 | 0.2768 | 0.7668 | 1.9502 | 0 | 0 | 2 | 2 | 1993 | 2135 | 1490 | 1823 | 0 | 7441 | 0.27 | 0.29 | 0.2 | 0.25 | 0 | 0.45 | 0.9365 | 0.1545 | 0.8604 | 1.9867 | 0 | 13212 | 18091 | 8874 | 12883 | 6326 | 12667 | 5951 | 17019 | 6594 | 7200 | 22945 | 20158 | 15107 | 5166 | 11277 | 16074 | 10018 | 8041 | 10405 | 17816 | 8475 | 6878 | 6837 | 17809 | 8673 | 7358 | 8213 | 13284 | 12832 | 9901 | 8311 | 9445 | 4851 | 15042 | 13184 | 9991 | 6962 | 3803 | 10273 | 4054 | 4905 | 1916 | 26009 | 4166 | 3918 | 12762 | 3852 | 12466 | 8249 | 7361 | 4522 | 2319 | 15376 | 7253 | 8481 | 9217 | 3260 | 1821 | 2958 | 3113 | 13189 | 7533 | 6297 | 3028 |
| GCF_000165365.1 | NC_007345 | NC_007345.1 | Theileria parva strain Muguga chromosome 2; complete sequence; whole genome shotgun sequence. | 645630 | 648238 | 339231 | 338783 | 0 | 1971882 | 0.33 | 0.33 | 0.17 | 0.17 | 0 | 0.34 | 0.7729 | 0.0027 | 0.9973 | 1.9284 | 479 | 502 | 981 | 604157 | 557854 | 311176 | 321313 | 0 | 1794500 | 0.34 | 0.32 | 0.17 | 0.18 | 0 | 0.35 | 0.8958 | 0.1457 | 0.8694 | 1.9174 | 1528 | 473 | 494 | 967 | 472488 | 400325 | 260736 | 277061 | 0 | 1410610 | 0.34 | 0.29 | 0.18 | 0.2 | 0 | 0.38 | 0.8703 | 0.2905 | 0.7647 | 1.9199 | 132 | 68065 | 84015 | 26454 | 23181 | 0 | 201715 | 0.34 | 0.43 | 0.11 | 0.12 | 0 | 0.23 | 0.7706 | 0.4502 | 0.6695 | 1.7188 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5 | 4 | 9 | 127 | 157 | 160 | 210 | 0 | 654 | 0.19 | 0.24 | 0.24 | 0.32 | 0 | 0.57 | 0.8894 | 0.2901 | 0.7529 | 1.9623 | 0 | 0 | 3 | 3 | 78 | 66 | 102 | 108 | 0 | 354 | 0.22 | 0.19 | 0.29 | 0.31 | 0 | 0.59 | 0.8809 | 0.1119 | 0.8953 | 1.9724 | 0 | 9621 | 13739 | 7009 | 10306 | 4882 | 9682 | 4651 | 12933 | 5354 | 5626 | 17086 | 15377 | 11627 | 3898 | 8464 | 12730 | 7995 | 6163 | 8655 | 14266 | 6347 | 5533 | 5636 | 14064 | 6153 | 5852 | 6377 | 9825 | 10059 | 7953 | 6645 | 7578 | 4094 | 10972 | 10145 | 8036 | 5499 | 3107 | 8431 | 3235 | 3805 | 1447 | 20087 | 3441 | 3092 | 10298 | 2968 | 9226 | 6273 | 5753 | 3616 | 1719 | 11619 | 5670 | 6239 | 7265 | 2163 | 1545 | 2335 | 2483 | 10086 | 5322 | 4626 | 2502 |
| NA | NC_007758 | NC_007758.1 | Theileria parva strain Muguga apicoplast; complete sequence. | 16996 | 14871 | 3456 | 4254 | 0 | 39577 | 0.43 | 0.38 | 0.09 | 0.11 | 0 | 0.19 | 0.8159 | 0.1702 | 0.8437 | 1.7073 | 69 | 1 | 70 | 14170 | 12041 | 2998 | 3745 | 0 | 32954 | 0.42 | 0.37 | 0.1 | 0.12 | 0 | 0.22 | 0.8263 | 0.2481 | 0.7917 | 1.7213 | 197 | 44 | 0 | 44 | 11753 | 9680 | 2357 | 2779 | 0 | 26569 | 0.45 | 0.36 | 0.09 | 0.1 | 0 | 0.19 | 0.8173 | 0.2412 | 0.7951 | 1.67 | 197 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 23 | 1 | 24 | 781 | 788 | 224 | 308 | 0 | 2101 | 0.36 | 0.37 | 0.11 | 0.16 | 0 | 0.27 | 0.8392 | 0.261 | 0.7851 | 1.808 | 0 | 2 | 0 | 2 | 1636 | 1573 | 417 | 658 | 0 | 4284 | 0.38 | 0.37 | 0.1 | 0.16 | 0 | 0.26 | 0.8686 | 0.2464 | 0.7967 | 1.8099 | 0 | 165 | 78 | 161 | 170 | 37 | 30 | 67 | 383 | 19 | 29 | 827 | 257 | 160 | 20 | 146 | 182 | 167 | 25 | 59 | 540 | 18 | 137 | 5 | 242 | 5 | 21 | 77 | 83 | 548 | 113 | 55 | 127 | 22 | 709 | 194 | 55 | 26 | 4 | 108 | 12 | 29 | 2 | 1046 | 16 | 23 | 162 | 18 | 202 | 119 | 109 | 26 | 6 | 654 | 73 | 14 | 61 | 1 | 1 | 7 | 37 | 118 | 41 | 2 | 5 |