GBRAP|Results

Assembly Assembly	Locus_ID Locus_ID	Version Version	Definition Sequence description	bp_chromo_A Total number of 'A' nucleotides in the whole sequence	bp_chromo_T Total number of 'T' nucleotides in the whole sequence	bp_chromo_C Total number of 'C' nucleotides in the whole sequence	bp_chromo_G Total number of 'G' nucleotides in the whole sequence	bp_chromo_N Total number of 'N' nucleotides in the whole sequence	bp_chromo_tot Total number of nucleotides in the whole sequence	fr_chromo_A Frequency of 'A' nucleotides in the whole sequence	fr_chromo_T Frequency of 'T' nucleotides in the whole sequence	fr_chromo_C Frequency of 'C' nucleotides in the whole sequence	fr_chromo_G Frequency of 'G' nucleotides in the whole sequence	fr_chromo_N Frequency of 'N' nucleotides in the whole sequence	GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence	topo_entropy_chromo Topological entropy of the whole sequence	chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence	chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee	shannon_chromo Shannon entropy of the whole sequence	n_gene_pos Number of genes in the positive strand	n_gene_neg Number of genes in the negative strand	n_gene_tot Total number of genes in the chromosome	bp_gene_A Number of 'A' bases in total genes	bp_gene_T Number of 'T' bases in total genes	bp_gene_C Number of 'C' bases in total genes	bp_gene_G Number of 'G' bases in total genes	bp_gene_N Number of 'N' bases in total genes	bp_gene_tot Total number of bases in total genes	fr_gene_A Frequency of 'A' bases among total gene bases	fr_gene_T Frequency of 'T' bases among total gene bases	fr_gene_C Frequency of 'C' bases among total gene bases	fr_gene_G Frequency of 'G' bases among total gene bases	GC_gene Percentage of 'G' and 'C' bases in total genes	topo_entropy_gene Topological entropy calculated from total gene sequences	chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes	chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes	shannon_gene Shannon entropy score for total genes	bp_gene_overlap_tot Number of bases overlapping between genes on two strands	n_cds_pos Number of CDS in the positive strand	n_cds_neg Number of CDS in the negative strand	n_cds_tot Total number of CDS in the chromosome	bp_cds_A Number of 'A' bases in total CDS (coding sequences)	bp_cds_T Number of 'T' bases in total CDS	bp_cds_C Number of 'C' bases in total CDS	bp_cds_G Number of 'G' bases in total CDS	bp_cds_tot Total bases in total CDS	fr_cds_A Frequency of 'A' bases among total CDS bases	fr_cds_T Frequency of 'T' bases among total CDS bases	fr_cds_C Frequency of 'C' bases among total CDS bases	fr_cds_G Frequency of 'G' bases among total CDS bases	GC_cds Percentage of 'G' and 'C' bases in total CDS	topo_entropy_cds Topological entropy calculated from total CDS sequences	chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS	chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS	shannon_cds Shannon entropy score for total CDS	bp_cds_overlap_tot Number of bases overlapping between CDS on two strands	bp_cds_intron_A Number of 'A' bases in total introns between CDS	bp_cds_intron_T Number of 'T' bases in total introns between CDS	bp_cds_intron_C Number of 'C' bases in total introns between CDS	bp_cds_intron_G Number of 'G' bases in total introns between CDS	bp_cds_intron_N Number of 'N' bases in total introns between CDS	bp_cds_intron_tot Total bases in total introns between CDS	fr_cds_intron_A Frequency of 'A' bases in total introns between CDS	fr_cds_intron_T Frequency of 'T' bases in total introns between CDS	fr_cds_intron_C Frequency of 'C' bases in total introns between CDS	fr_cds_intron_G Frequency of 'G' bases in total introns between CDS	fr_cds_intron_N Frequency of 'N' bases in total introns between CDS	GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS	topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS	chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS	chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS	shannon_cds_intron Shannon entropy score for total introns between CDS	n_ncRNA_pos Number of ncRNA in the positive strand	n_ncRNA_neg Number of ncRNA in the negative strand	n_ncRNA_tot Total number of ncRNA in the chromosome	bp_ncRNA_A Number of 'A' bases in total ncRNA	bp_ncRNA_T bp_ncRNA_T	bp_ncRNA_C Number of 'C' bases in total ncRNA	bp_ncRNA_G Number of 'G' bases in total ncRNA	bp_ncRNA_tot Total bases in total ncRNA	fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases	fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases	fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases	fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases	fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases	GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA	topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences	chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA	chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA	shannon_ncRNA Shannon entropy score for total ncRNA	bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands	bp_nc_intron_A Number of 'A' bases in total introns between ncRNA	bp_nc_intron_T Number of 'T' bases in total introns between ncRNA	bp_nc_intron_C Number of 'C' bases in total introns between ncRNA	bp_nc_intron_G Number of 'G' bases in total introns between ncRNA	bp_nc_intron_N Number of 'N' bases in total introns between ncRNA	bp_nc_intron_tot Total bases in total introns between ncRNA	fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA	fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA	fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA	fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA	fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA	GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA	topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA	chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA	chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA	shannon_nc_intron Shannon entropy score for total introns between ncRNA	bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands	n_tRNA_pos Number of tRNA in the positive strand	n_tRNA_neg Number of tRNA in the negative strand	n_tRNA_tot Total number of tRNA in the chromosome	bp_tRNA_A Number of 'A' bases in total tRNA	bp_tRNA_T Number of 'T' bases in total tRNA	bp_tRNA_C Number of 'C' bases in total tRNA	bp_tRNA_G Number of 'G' bases in total tRNA	bp_tRNA_tot Total bases in total tRNA	fr_tRNA_A Frequency of 'A' bases among total tRNA bases	fr_tRNA_T Frequency of 'T' bases among total tRNA bases	fr_tRNA_C Frequency of 'C' bases among total tRNA bases	fr_tRNA_G Frequency of 'G' bases among total tRNA bases	GC_tRNA Percentage of 'G' and 'C' bases in total tRNA	topo_entropy_tRNA Topological entropy calculated from total tRNA sequences	chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA	chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA	shannon_tRNA Shannon entropy score for total tRNA	n_rRNA_pos Number of rRNA in the positive strand	n_rRNA_neg Number of rRNA in the negative strand	n_rRNA_tot Total number of rRNA in the chromosome	bp_rRNA_A Number of 'A' bases in total rRNA	bp_rRNA_T Number of 'T' bases in total rRNA	bp_rRNA_C Number of 'C' bases in total rRNA	bp_rRNA_G Number of 'G' bases in total rRNA	bp_rRNA_tot Total bases in total rRNA	fr_rRNA_A Frequency of 'A' bases among total rRNA bases	fr_rRNA_T Frequency of 'T' bases among total rRNA bases	fr_rRNA_C Frequency of 'C' bases among total rRNA bases	fr_rRNA_G Frequency of 'G' bases among total rRNA bases	fr_rRNA_N Frequency of 'N' bases among total rRNA bases	GC_rRNA Percentage of 'G' and 'C' bases in total rRNA	topo_entropy_rRNA Topological entropy calculated from total rRNA sequences	chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA	chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA	shannon_rRNA Shannon entropy score for total rRNA	ATG ATG	AAG AAG	GTA GTA	ACT ACT	GCA GCA	GAG GAG	GCT GCT	ATT ATT	TCC TCC	TGG TGG	AAT AAT	GAA GAA	TCA TCA	ACG ACG	AGT AGT	AAC AAC	TCT TCT	GTG GTG	TTC TTC	TTT TTT	CTG CTG	GGT GGT	CTC CTC	GAT GAT	CAG CAG	ACC ACC	CTA CTA	TTG TTG	TAT TAT	GGA GGA	ATC ATC	CTT CTT	GTC GTC	ATA ATA	ACA ACA	GAC GAC	CAC CAC	CCC CCC	TAC TAC	GCC GCC	AGC AGC	CGC CGC	AAA AAA	GGC GGC	TGC TGC	GTT GTT	GGG GGG	AGA AGA	TGT TGT	CAT CAT	TCG TCG	GCG GCG	TTA TTA	CCT CCT	AGG AGG	CCA CCA	TAG TAG	CGG CGG	CCG CCG	CGT CGT	CAA CAA	TAA TAA	TGA TGA	CGA CGA
GCF_030867095.1	NC_081824	NC_081824.1	Alligator mississippiensis isolate rAllMis1 chromosome 1; rAllMis1; whole genome shotgun sequence.	135890760	135971844	107143917	107330988	257575	486595084	0.28	0.28	0.22	0.22	0	0.44	0.9493	0.0012	0.9988	1.9896	2191	2129	4320	64952309	69157768	50606548	52489920	26	237206571	0.26	0.28	0.23	0.24	0.46	0.9218	0.0945	0.9132	1.9818	57610	1432	1380	2812	1461703	1209075	1175844	1258377	5104999	0.29	0.24	0.22	0.25	0.46	0.8641	0.3117	0.7496	1.9397	0	45453371	49090348	35161132	36552072	26	166256949	0.27	0.3	0.21	0.22	0	0.43	0.9035	0.1433	0.8733	1.9572	610	664	1274	788750	776508	631354	641967	2838579	0.28	0.25	0.23	0.24	0	0.47	0.8742	0.2506	0.7936	1.9539	89	6608616	6773601	5206971	5295440	0	23884628	0.27	0.28	0.22	0.23	0	0.45	0.908	0.1299	0.8855	1.9716	0	146	70	216	3137	4134	3789	4787	15847	0.2	0.26	0.24	0.3	0.54	0.8672	0.2693	0.7749	1.9699	0	2	2	66	71	83	86	306	0.22	0.23	0.27	0.28	0	0.55	0.8839	0.0543	0.9474	1.9912	42372	48313	15866	25284	33315	42798	30947	28372	25370	32698	29782	46725	29338	9038	24125	28630	27250	34264	28936	30180	52557	15477	26497	29928	51097	25351	17817	30349	20099	32697	27986	27855	17926	21244	34888	25826	24718	23461	19785	28896	34342	11003	51301	24592	27923	21430	22461	40039	23424	25144	7215	11582	19538	27504	26564	32391	9919	11613	11025	6799	33492	13194	25139	7710
GCF_030867095.1	NC_081825	NC_081825.1	Alligator mississippiensis isolate rAllMis1 chromosome 2; rAllMis1; whole genome shotgun sequence.	85851255	85982572	67773145	67838576	190267	307635815	0.28	0.28	0.22	0.22	0	0.44	0.9492	0.0012	0.9988	1.9896	1486	1445	2931	42433464	45305996	33289419	34716305	5950	155751134	0.26	0.28	0.23	0.24	0.46	0.9241	0.0884	0.9178	1.982	36554	1074	984	2058	1061658	879235	868038	918121	3727052	0.29	0.24	0.22	0.25	0.47	0.8642	0.3121	0.7494	1.9414	0	30033818	32515599	23435194	24468252	1996	110454859	0.27	0.3	0.21	0.22	0	0.43	0.9027	0.1472	0.8702	1.9585	353	372	725	501317	493387	393303	403682	1791689	0.28	0.25	0.23	0.24	0	0.47	0.8764	0.246	0.7971	1.953	0	4016064	4094490	3123227	3193336	3954	14431071	0.27	0.28	0.22	0.23	0	0.44	0.9059	0.1437	0.8754	1.9691	0	45	83	128	1860	2169	2466	2994	9489	0.2	0.23	0.26	0.31	0.57	0.881	0.1888	0.833	1.9651	3	2	5	157	161	207	205	730	0.21	0.22	0.29	0.28	0	0.57	0.8881	0.0579	0.9455	1.9783	30419	35203	11581	19282	24728	32296	22616	20260	19048	22946	21834	34474	21561	6559	17316	20251	20069	25139	22062	21427	38947	11192	20199	22296	38120	17440	13251	21759	14524	23230	19959	19983	13383	14791	25265	19829	18599	17215	14300	21195	24022	8427	36770	17861	20128	15362	15979	28171	17598	18107	5094	8772	13670	19999	19390	25447	6864	8675	7915	5388	25123	9006	18257	5743
GCF_030867095.1	NC_081826	NC_081826.1	Alligator mississippiensis isolate rAllMis1 chromosome 3; rAllMis1; whole genome shotgun sequence.	84859761	84844532	66376271	66479963	1182685	303743212	0.28	0.28	0.22	0.22	0	0.44	0.9491	0.0009	0.9991	1.9871	1279	1203	2482	41570741	44417029	32411336	33717583	8520	152125209	0.26	0.28	0.22	0.24	0.46	0.9252	0.0834	0.9225	1.9795	7148	854	775	1629	858679	706941	684902	739586	2990108	0.29	0.24	0.22	0.25	0.46	0.8638	0.3047	0.7543	1.9382	0	28142070	30481810	21882082	22760971	7910	103274843	0.27	0.3	0.21	0.22	0	0.43	0.9022	0.1417	0.8745	1.9525	375	357	732	516709	508899	394982	402723	1823313	0.28	0.25	0.22	0.24	0	0.46	0.8757	0.2511	0.7933	1.9507	57	4225161	4354590	3310005	3366272	0	15256028	0.27	0.29	0.21	0.23	0	0.44	0.9071	0.1416	0.8776	1.9674	0	54	62	116	1879	2099	1956	2606	8540	0.22	0.25	0.23	0.31	0.53	0.8799	0.2275	0.8044	1.976	0	1	1	442	436	435	507	1820	0.24	0.24	0.24	0.28	0	0.52	0.9366	0.0833	0.9222	1.9969	24959	28165	9879	15205	19674	25563	17494	16864	14330	18602	18069	28404	16906	5646	14132	17185	15928	20074	16902	17578	30008	9066	15126	18022	29944	13655	10298	17413	12215	19065	15761	16053	10718	12537	20225	16027	13920	13182	12076	17651	19130	7011	30159	15112	15792	12919	12317	22558	13521	14492	4635	7609	11651	15625	15147	18856	5771	7198	7058	4078	19547	7939	14447	4653
GCF_030867095.1	NC_081827	NC_081827.1	Alligator mississippiensis isolate rAllMis1 chromosome 4; rAllMis1; whole genome shotgun sequence.	67411143	67746106	53993813	54202070	11725508	255078640	0.26	0.27	0.21	0.21	0.05	0.42	0.9496	0.0044	0.9956	1.9644	1362	1375	2737	38636231	41229404	30819318	32059483	447	142744883	0.25	0.27	0.23	0.24	0.48	0.9222	0.0855	0.9208	1.9791	215703	1009	939	1948	1006619	828230	864472	915052	3614373	0.28	0.23	0.23	0.25	0.48	0.8636	0.313	0.7487	1.9407	377	26987004	29180177	21491546	22345539	247	100004513	0.26	0.29	0.22	0.23	0	0.45	0.8996	0.1539	0.8653	1.956	301	284	585	425108	413204	342100	350039	1530451	0.28	0.25	0.23	0.24	0	0.47	0.8766	0.2537	0.7915	1.9527	0	3049579	3129669	2376651	2445773	200	11001872	0.26	0.29	0.22	0.23	0	0.45	0.9048	0.1548	0.8682	1.9676	0	37	142	179	2459	2826	3727	4589	13601	0.18	0.21	0.27	0.33	0.6	0.8667	0.1752	0.8463	1.947	0	1	1	32	34	43	44	153	0.21	0.22	0.28	0.29	0	0.57	0.887	0.0418	0.9592	1.986	29985	34448	10521	17517	24284	31959	22061	18426	19013	23387	19556	31277	20689	7536	16138	20133	18771	24779	20006	19048	38614	11842	19442	20413	36949	18276	12179	20667	13170	23600	19286	18081	13379	13480	24569	19425	17543	18734	14281	22258	24211	9131	32591	19241	19961	13809	17128	26355	15730	17507	5652	9366	12322	20236	19741	24832	6362	9545	9163	5446	22968	8358	17520	6017
GCF_030867095.1	NC_081828	NC_081828.1	Alligator mississippiensis isolate rAllMis1 chromosome 5; rAllMis1; whole genome shotgun sequence.	61702692	61650211	48728893	48687180	150360	220919336	0.28	0.28	0.22	0.22	0	0.44	0.9507	0.0009	0.9991	1.9896	1072	1049	2121	32722544	34929996	25791358	26924031	14722	120382651	0.26	0.27	0.23	0.24	0.47	0.925	0.0856	0.9205	1.9799	466	774	781	1555	805184	655631	692443	736831	2890089	0.28	0.23	0.23	0.25	0.48	0.8627	0.3134	0.7485	1.9378	0	23194006	25139619	18167761	18997708	14722	85513816	0.26	0.29	0.22	0.23	0	0.45	0.8984	0.1616	0.8601	1.9517	288	240	528	373838	362719	292329	296447	1325333	0.28	0.25	0.23	0.24	0	0.47	0.8756	0.2465	0.7974	1.9531	0	2858928	2913823	2233025	2273849	0	10279625	0.27	0.29	0.22	0.23	0	0.44	0.9075	0.1389	0.8801	1.9693	0	12	16	28	404	534	487	629	2054	0.2	0.26	0.24	0.31	0.54	0.8715	0.2751	0.7654	1.97	1	0	1	22	27	32	38	119	0.18	0.23	0.27	0.32	0	0.59	0.8809	0.1878	0.8285	1.9712	23494	27248	8435	14105	19690	24888	17824	14501	14913	19393	15614	25251	16151	6029	13103	15374	14423	19650	15880	15098	30440	9344	14965	15648	30127	14875	9638	15888	10496	18917	14877	14554	10356	11019	19579	14753	14279	15386	10992	18651	20060	7682	26687	15247	16423	11003	13985	21693	12371	13547	4578	7957	9849	16276	16741	19675	5203	8167	7468	4376	18245	6759	14151	4743
GCF_030867095.1	NC_081829	NC_081829.1	Alligator mississippiensis isolate rAllMis1 chromosome 6; rAllMis1; whole genome shotgun sequence.	27742986	27681556	22914380	22882691	165770	101387383	0.27	0.27	0.23	0.23	0	0.45	0.9499	0.0018	0.9982	1.9926	523	576	1099	15641144	16674978	12804044	13388819	36452	58545437	0.25	0.27	0.24	0.25	0.48	0.9248	0.0846	0.921	1.9772	19199	388	428	816	392025	315965	356129	374354	1438473	0.28	0.22	0.24	0.26	0.5	0.8623	0.3175	0.746	1.9353	0	10963935	11892717	8910161	9319247	3055	41089115	0.25	0.28	0.23	0.24	0	0.47	0.8978	0.1585	0.8612	1.9529	127	138	265	199108	194630	165662	170193	729593	0.27	0.25	0.23	0.25	0	0.48	0.8785	0.2456	0.7972	1.9527	0	1200925	1238484	996518	1025056	0	4460983	0.26	0.28	0.22	0.24	0	0.46	0.9026	0.1607	0.8637	1.9684	0	3	3	6	88	115	105	137	445	0.2	0.26	0.24	0.31	0.54	0.8966	0.2689	0.7682	1.9717	0	1	1	38	41	36	38	153	0.25	0.27	0.24	0.25	0	0.48	0.8747	0.065	0.9371	1.9984	11085	13494	3928	6573	9982	13197	8649	6746	7644	9374	7289	12256	7666	3496	6197	7722	7119	9921	7863	7003	15163	4405	7922	7924	14847	7449	4477	7510	4682	9656	7578	6763	5270	4889	9068	8027	7071	8459	5617	9972	9968	4484	12955	8679	8208	5225	7223	10432	5913	6387	2837	4778	4431	8314	7751	10016	2419	4714	4742	2251	8795	3098	6799	2677
GCF_030867095.1	NC_081830	NC_081830.1	Alligator mississippiensis isolate rAllMis1 chromosome 7; rAllMis1; whole genome shotgun sequence.	24281100	24348815	20671443	20635716	80190	90017264	0.27	0.27	0.23	0.23	0	0.46	0.949	0.0023	0.9977	1.9947	1059	935	1994	12167179	13060776	10501642	10918481	4043	46652121	0.23	0.26	0.26	0.25	0.51	0.9124	0.1446	0.8712	1.9749	24979	794	777	1571	538542	501308	608208	585191	2233249	0.25	0.22	0.26	0.27	0.53	0.8612	0.3106	0.7506	1.9341	0	7791540	8486745	6622461	6914113	0	29814859	0.23	0.26	0.25	0.26	0	0.51	0.8854	0.2148	0.8205	1.9439	160	127	287	196919	197597	179549	187418	761483	0.27	0.24	0.24	0.26	0	0.5	0.8771	0.2664	0.7835	1.953	0	1633849	1708155	1311742	1365341	0	6019087	0.25	0.28	0.22	0.25	0	0.47	0.9017	0.1896	0.8422	1.9667	0	62	13	75	949	1294	1430	1777	5450	0.17	0.24	0.26	0.33	0.59	0.8925	0.2751	0.7711	1.9541	28	0	28	643	646	979	1064	3332	0.19	0.19	0.29	0.32	0	0.61	0.8933	0.0454	0.9564	1.9619	17802	17689	5156	10459	15305	20067	15165	9938	14841	14374	8873	13291	11441	5962	8350	11943	11479	17753	15783	11404	28029	7045	15092	9605	21725	15065	6183	10904	7425	12854	15453	10393	10059	6484	13328	12546	11595	16720	9425	19175	15806	8050	13325	14358	14652	7730	13711	13029	9424	8816	4130	7271	5386	13532	12974	15685	2348	8381	7689	3507	10705	2879	8038	3771
GCF_030867095.1	NC_081831	NC_081831.1	Alligator mississippiensis isolate rAllMis1 chromosome 8; rAllMis1; whole genome shotgun sequence.	22425014	22481780	19352319	19374086	8777	83641976	0.27	0.27	0.23	0.23	0	0.46	0.9505	0.0018	0.9982	1.996	797	662	1459	12240531	13160373	10767979	11277507	8564	47454954	0.24	0.25	0.24	0.26	0.5	0.9176	0.1019	0.906	1.9789	68257	502	507	1009	440400	366956	475752	486415	1769523	0.25	0.21	0.26	0.28	0.54	0.8599	0.3162	0.7464	1.9366	0	7875943	8639701	6868839	7231935	8564	30624982	0.23	0.26	0.24	0.26	0	0.51	0.8853	0.2171	0.8187	1.9479	279	124	403	185722	186909	164295	169294	706220	0.27	0.24	0.23	0.25	0	0.49	0.8799	0.2258	0.8111	1.9612	0	1229948	1274587	985662	1025272	0	4515469	0.25	0.28	0.22	0.25	0	0.47	0.8991	0.1882	0.8444	1.965	0	8	21	29	434	556	486	637	2113	0.21	0.26	0.23	0.3	0.53	0.8863	0.2678	0.7717	1.9691	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13258	15980	3874	7569	12469	17930	12040	6287	10153	12328	6323	12505	9165	4560	6744	8905	8057	13731	9626	6996	22963	5772	10750	8586	19867	10561	4904	8122	4663	11426	9498	7651	7055	4151	10455	10646	9564	13125	6711	14804	13496	6433	11059	12366	11224	5252	11061	11344	6705	7504	3465	6279	3721	11318	10291	13711	2219	6795	6060	3041	9398	2650	8127	3465
GCF_030867095.1	NC_081832	NC_081832.1	Alligator mississippiensis isolate rAllMis1 chromosome 9; rAllMis1; whole genome shotgun sequence.	22327327	21500438	18543975	17576757	25855	79974352	0.28	0.27	0.23	0.22	0	0.45	0.9487	0.0456	0.9554	1.9927	472	542	1014	11166841	11917036	9386526	9768379	25042	42263824	0.25	0.26	0.24	0.25	0.49	0.9235	0.0842	0.9213	1.9765	6706	366	410	776	336131	271749	336871	349918	1294669	0.27	0.22	0.25	0.27	0.51	0.8615	0.3235	0.7426	1.9359	0	7028610	7643574	5892557	6133270	13	26698024	0.24	0.28	0.23	0.25	0	0.48	0.8952	0.167	0.8548	1.9535	102	127	229	176334	176733	155534	162893	671494	0.26	0.24	0.23	0.26	0	0.49	0.8788	0.2499	0.794	1.9552	0	1237630	1285050	982937	1026694	0	4532311	0.25	0.28	0.22	0.24	0	0.47	0.9019	0.1898	0.8434	1.965	0	3	0	3	33	53	65	77	228	0.14	0.23	0.28	0.34	0.62	0.8651	0.3261	0.7314	1.9331	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9371	11821	2956	5594	8719	13021	7985	5133	7601	8207	5639	10167	6534	4006	5283	7400	6220	10185	7126	5577	14972	3746	7686	6704	13537	7062	3695	6087	3677	8322	7052	5694	5260	3740	7669	8685	6397	8294	5251	10108	10013	4528	9656	8484	7587	4220	6832	8774	4757	5222	3190	5694	3138	7281	7502	8850	1663	4968	5033	2111	7351	2132	5722	2530
GCF_030867095.1	NC_081833	NC_081833.1	Alligator mississippiensis isolate rAllMis1 chromosome 10; rAllMis1; whole genome shotgun sequence.	21136571	21283759	17666923	17778720	400	77866373	0.27	0.27	0.23	0.23	0	0.46	0.9511	0.0066	0.9934	1.9942	564	579	1143	12377678	13338175	10402136	10920672	0	47038661	0.25	0.27	0.23	0.25	0.48	0.9246	0.0896	0.9165	1.983	7119	408	440	848	383344	317017	365272	381519	1447152	0.27	0.23	0.24	0.26	0.5	0.8632	0.3045	0.7544	1.9442	0	7964529	8748083	6689988	7037207	0	30439807	0.25	0.29	0.22	0.24	0	0.46	0.898	0.1657	0.8551	1.9592	145	126	271	199480	196601	164195	172609	732885	0.28	0.25	0.23	0.25	0	0.48	0.8782	0.247	0.7967	1.9536	0	1573936	1633257	1235563	1277986	0	5720742	0.26	0.29	0.22	0.24	0	0.46	0.9043	0.1713	0.8562	1.9664	0	5	10	15	198	254	297	365	1114	0.18	0.23	0.27	0.33	0.59	0.8859	0.2392	0.7895	1.9607	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	10960	13322	3758	6776	10133	14324	9190	6513	8004	9438	6518	11682	7643	3506	6134	7791	7357	10404	7979	6787	16788	4351	8528	7652	15843	7596	4386	7542	4516	9268	7638	6998	5487	4419	8910	8436	7070	8542	5568	10136	10910	4543	11157	8575	8276	5291	6946	10260	6036	6472	2782	4863	3920	8451	8253	10174	2092	4940	4802	2282	8408	2687	7050	2730
GCF_030867095.1	NC_081834	NC_081834.1	Alligator mississippiensis isolate rAllMis1 chromosome 11; rAllMis1; whole genome shotgun sequence.	20137203	20106170	17879359	17828657	65	75951454	0.27	0.26	0.24	0.23	0	0.47	0.9493	0.0022	0.9978	1.9974	861	809	1670	10042971	10757102	8703660	9057458	13	38561204	0.23	0.26	0.25	0.26	0.51	0.9136	0.1211	0.8902	1.9805	73204	560	532	1092	424247	360015	445935	452477	1682674	0.26	0.21	0.25	0.28	0.52	0.8595	0.3341	0.7358	1.9311	0	6202876	6769511	5315752	5551650	0	23839789	0.23	0.27	0.24	0.26	0	0.5	0.889	0.1999	0.8318	1.9482	159	186	345	215300	212131	192070	193131	812632	0.26	0.23	0.24	0.26	0	0.5	0.8753	0.259	0.7893	1.9507	109	1006866	1056065	838251	869394	0	3770576	0.24	0.27	0.23	0.25	0	0.48	0.8985	0.1754	0.8508	1.9662	0	134	86	220	3256	4115	3994	5056	16421	0.2	0.25	0.24	0.31	0.55	0.8811	0.2394	0.7919	1.9737	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13310	14155	3743	7918	11153	17271	11350	6679	11509	11396	6687	11452	9161	3922	6883	8329	8450	12925	9768	6987	21764	4739	10094	7919	17690	11446	4338	8011	4892	10790	10906	7145	6809	4466	10575	9808	9009	12027	6382	14134	13418	4833	11220	10249	10693	5254	10880	11531	6898	6554	3096	5241	3829	10180	11410	11598	1996	5417	5024	2440	8555	2424	7089	2788
GCF_030867095.1	NC_081835	NC_081835.1	Alligator mississippiensis isolate rAllMis1 chromosome 12; rAllMis1; whole genome shotgun sequence.	18258669	18313552	15459093	15471711	465621	67968646	0.27	0.27	0.23	0.23	0.01	0.46	0.9525	0.0019	0.9981	1.9911	456	402	858	12364762	13345095	10453208	10971825	0	47134890	0.25	0.27	0.24	0.25	0.48	0.9264	0.0866	0.9189	1.9834	5923	362	302	664	340991	279053	322376	338823	1281243	0.27	0.22	0.24	0.27	0.51	0.8635	0.3106	0.7503	1.9427	0	8781166	9600870	7406960	7785338	0	33574334	0.24	0.28	0.23	0.24	0	0.47	0.8981	0.1628	0.8577	1.9611	95	93	188	121661	121168	100358	105315	448502	0.27	0.25	0.23	0.26	0	0.48	0.8772	0.252	0.7943	1.956	0	1128993	1178708	920800	953669	0	4182170	0.25	0.29	0.22	0.24	0	0.46	0.903	0.1893	0.8437	1.9658	0	2	1	3	43	57	49	70	219	0.2	0.26	0.22	0.31	0.53	0.8313	0.3284	0.7269	1.968	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9937	11975	3205	5981	9061	11993	8206	5664	7015	8446	6010	10384	6740	3222	5349	6965	6481	9208	6944	5771	14342	4235	7174	7083	14015	7033	3802	6412	4087	8865	6955	6082	5058	3734	8030	7580	6302	7251	5003	8930	9160	3934	10089	7764	7635	4506	6710	8884	5266	5572	2406	4039	3474	7951	7315	9135	1820	4125	3991	2122	7533	2346	5985	2524
GCF_030867095.1	NC_081836	NC_081836.1	Alligator mississippiensis isolate rAllMis1 chromosome 13; rAllMis1; whole genome shotgun sequence.	15909309	15981013	13934043	14011620	8124	59844109	0.27	0.27	0.23	0.23	0	0.47	0.952	0.005	0.995	1.9968	483	446	929	9881619	10662212	8711092	9112375	7924	38375222	0.25	0.27	0.24	0.25	0.48	0.9272	0.0822	0.9227	1.9867	27962	373	344	717	348202	288710	345861	355225	1337998	0.27	0.22	0.25	0.26	0.51	0.8648	0.2982	0.7584	1.9461	0	7019401	7729749	6135045	6448274	7500	27339969	0.24	0.28	0.23	0.24	0	0.48	0.8987	0.1615	0.8581	1.9644	104	94	198	165625	162623	146816	151290	626354	0.27	0.24	0.24	0.26	0	0.49	0.8807	0.2384	0.8034	1.9579	0	770933	788213	664353	675176	0	2898675	0.25	0.28	0.23	0.24	0	0.47	0.9044	0.1678	0.8579	1.9723	66053	2	5	7	94	122	139	169	524	0.18	0.23	0.27	0.32	0.59	0.8777	0.2271	0.8026	1.9565	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	9679	11980	3057	5970	9074	12916	8512	5451	8112	9181	5690	10475	7143	3703	5551	7243	6813	9340	7618	6071	15356	4108	8036	6778	14286	7483	3820	6411	3923	8933	7430	6223	5362	3581	7940	7935	6894	8146	5261	9739	10093	4441	9777	8329	8080	4586	6796	9551	5410	5789	2813	4603	3382	8061	7527	9560	1942	4783	4629	2452	7696	2529	6712	2822
GCF_030867095.1	NC_081837	NC_081837.1	Alligator mississippiensis isolate rAllMis1 chromosome 14; rAllMis1; whole genome shotgun sequence.	12113998	11889969	11194346	10839885	54838	46093036	0.26	0.26	0.24	0.24	0	0.48	0.9539	0.0254	0.9749	1.9979	581	868	1449	6887493	7513272	6329922	6712346	0	27443033	0.22	0.24	0.26	0.28	0.54	0.9068	0.0993	0.909	1.9726	1553	360	346	706	291401	243055	304376	313476	1152308	0.26	0.21	0.25	0.27	0.53	0.8634	0.3084	0.7527	1.9429	0	4655343	5200162	4192999	4456730	0	18505234	0.23	0.27	0.24	0.25	0	0.49	0.8952	0.1774	0.8459	1.9592	105	357	462	141480	143100	139007	145002	568589	0.23	0.22	0.26	0.28	0	0.55	0.8754	0.2024	0.8324	1.9548	0	384896	410077	353279	368600	0	1516852	0.23	0.28	0.23	0.26	0	0.49	0.8962	0.22	0.817	1.9678	0	46	57	103	1553	1670	1701	2602	7526	0.2	0.23	0.22	0.35	0.58	0.8683	0.3098	0.7429	1.9562	67	105	172	48598	45058	61933	72943	228532	0.2	0.19	0.29	0.31	0	0.6	0.8957	0.0821	0.9225	1.9541	8646	10489	2667	4881	8067	11665	7509	4250	6996	7744	4309	8198	5729	3483	4655	6181	5467	8810	6479	4741	14326	3498	7242	5447	12421	6733	3213	5297	2995	7814	6737	5126	4790	2863	6840	6951	6079	7418	4406	9003	8865	4103	7401	7378	7155	3694	6316	7484	4634	4969	2585	4260	2664	6867	6983	8159	1576	4326	4104	2177	6391	1857	5489	2518
GCF_030867095.1	NC_081838	NC_081838.1	Alligator mississippiensis isolate rAllMis1 chromosome 15; rAllMis1; whole genome shotgun sequence.	8866412	8863969	10061174	10035416	910113	38737084	0.23	0.23	0.26	0.26	0.02	0.52	0.9452	0.0014	0.9986	1.9837	1055	1133	2188	3860392	4194669	4889556	5048918	0	17993535	0.19	0.22	0.29	0.3	0.59	0.9002	0.1426	0.8737	1.9523	57248	727	681	1408	443801	383374	673405	660172	2160752	0.21	0.18	0.31	0.31	0.62	0.8516	0.3124	0.7501	1.9086	0	1869767	2133175	2412919	2534882	0	8950743	0.17	0.21	0.3	0.32	0	0.62	0.8591	0.2839	0.7689	1.9058	133	137	270	129051	129430	130169	128010	516660	0.25	0.24	0.26	0.25	0	0.51	0.8743	0.2445	0.7989	1.9605	0	316573	338018	293668	306198	0	1254457	0.24	0.26	0.24	0.26	0	0.5	0.8961	0.1745	0.8494	1.97	0	180	304	484	6199	8322	10338	12717	37576	0.17	0.22	0.28	0.34	0.61	0.8648	0.3009	0.7502	1.9366	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	13425	16597	2684	7639	15678	23882	15903	4302	14416	17084	3842	8255	9681	8347	6562	8906	8476	19220	11219	4710	31135	7250	13057	7103	23747	15714	4059	6473	3255	12939	11166	6309	8506	2340	10925	14331	13166	24347	7835	26202	19829	13007	6488	21119	16934	4030	19136	10889	6914	7036	6202	12452	1891	14711	14033	17594	1450	13610	12799	4728	7903	1284	7619	4683
GCF_030867095.1	NC_081839	NC_081839.1	Alligator mississippiensis isolate rAllMis1 chromosome 16; rAllMis1; whole genome shotgun sequence.	8729911	8725916	8729770	8711075	769103	35665775	0.24	0.24	0.24	0.24	0.02	0.49	0.9459	0.0013	0.9987	1.9876	404	417	821	5388784	5827510	5431998	5674474	0	22322766	0.22	0.24	0.26	0.27	0.53	0.9181	0.1019	0.9061	1.9775	6029	304	293	597	236594	190558	286632	276973	990757	0.25	0.2	0.27	0.28	0.55	0.8608	0.3115	0.7511	1.9359	0	3346654	3693831	3337034	3497594	0	13875113	0.21	0.25	0.26	0.27	0	0.54	0.888	0.192	0.8353	1.9515	89	102	191	109395	112674	110198	118581	450848	0.24	0.23	0.25	0.28	0	0.53	0.8781	0.2401	0.8012	1.9533	0	471873	498647	471022	487770	0	1929312	0.23	0.27	0.24	0.27	0	0.51	0.8976	0.2144	0.8235	1.9665	0	14	13	27	389	530	439	592	1950	0.2	0.27	0.22	0.3	0.53	0.881	0.3075	0.7379	1.9752	0	1	1	38	41	40	35	154	0.25	0.27	0.26	0.23	0	0.49	0.887	0.1046	0.9009	1.9974	6706	8318	1766	4120	7536	10460	6709	2588	6742	6834	2804	5931	4888	3393	3480	4667	4442	6968	4832	3020	12443	2824	6963	3993	11326	6606	2598	3807	1917	6298	5262	4077	4141	1765	5950	6153	5916	8006	3570	9031	8458	4136	5187	7573	6417	2510	6205	6224	3471	4190	2537	4338	1565	6734	6409	8332	991	4662	4705	1941	5371	1088	4250	2436
NA	NC_001922	NC_001922.1	Alligator mississippiensis mitochondrion; complete genome.	5200	4283	4911	2252	0	16646	0.31	0.26	0.3	0.14	0	0.43	0.9285	0.4679	0.6411	1.9383	28	9	37	4696	4081	4431	2348	0	15556	0.3	0.27	0.25	0.19	0.43	0.8816	0.4419	0.6633	1.9269	17	4	1	5	1464	1379	1424	659	4926	0.29	0.29	0.27	0.15	0.42	0.8831	0.7121	0.5139	1.8659	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	0	0	0	0	0	0	NA	NA	NA	NA	NA	NA	NA	NA	NA	NA	0	14	8	22	480	424	341	347	1592	0.3	0.27	0.21	0.22	0.43	0.8736	0.3807	0.6932	1.9361	2	0	2	894	534	669	469	2566	0.34	0.21	0.26	0.19	0	0.45	0.9153	0.4207	0.6553	1.9554	22	4	28	27	51	6	23	83	28	10	9	23	43	6	12	46	22	16	49	48	15	8	63	5	6	82	111	7	18	27	61	35	11	69	55	17	22	32	22	41	23	7	50	23	7	14	20	0	9	11	6	9	50	12	1	32	0	1	7	5	40	4	33	15