GBRAP

Genome-Based Retrieval and Analysis Parser


Reptile : Trachemys_scripta_elegans
Assembly Assembly Locus_ID Locus_ID Version Version Definition Sequence description bp_chromo_A Total number of 'A' nucleotides in the whole sequence bp_chromo_T Total number of 'T' nucleotides in the whole sequence bp_chromo_C Total number of 'C' nucleotides in the whole sequence bp_chromo_G Total number of 'G' nucleotides in the whole sequence bp_chromo_N Total number of 'N' nucleotides in the whole sequence bp_chromo_tot Total number of nucleotides in the whole sequence fr_chromo_A Frequency of 'A' nucleotides in the whole sequence fr_chromo_T Frequency of 'T' nucleotides in the whole sequence fr_chromo_C Frequency of 'C' nucleotides in the whole sequence fr_chromo_G Frequency of 'G' nucleotides in the whole sequence fr_chromo_N Frequency of 'N' nucleotides in the whole sequence GC_chromo Percentage of ā€˜G’ + ā€˜C’ nucleotides in the whole sequence topo_entropy_chromo Topological entropy of the whole sequence chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee shannon_chromo Shannon entropy of the whole sequence n_gene_pos Number of genes in the positive strand n_gene_neg Number of genes in the negative strand n_gene_tot Total number of genes in the whole sequence bp_gene_A Number of 'A' bases in total genes bp_gene_T Number of 'T' bases in total genes bp_gene_C Number of 'C' bases in total genes bp_gene_G Number of 'G' bases in total genes bp_gene_N Number of 'N' bases in total genes bp_gene_tot Total number of bases in total genes fr_gene_A Frequency of 'A' bases among total gene bases fr_gene_T Frequency of 'T' bases among total gene bases fr_gene_C Frequency of 'C' bases among total gene bases fr_gene_G Frequency of 'G' bases among total gene bases fr_gene_N Frequency of 'N' bases among total gene bases GC_gene Percentage of 'G' and 'C' bases in total genes topo_entropy_gene Topological entropy calculated from total gene sequences chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes shannon_gene Shannon entropy score for total genes bp_gene_overlap_tot Number of bases overlapping between genes on two strands n_cds_pos Number of CDS in the positive strand n_cds_neg Number of CDS in the negative strand n_cds_tot Total number of CDS in the whole sequence bp_cds_A Number of 'A' bases in total CDS (coding sequences) bp_cds_T Number of 'T' bases in total CDS bp_cds_C Number of 'C' bases in total CDS bp_cds_G Number of 'G' bases in total CDS bp_cds_N Number of 'N' bases in total CDS bp_cds_tot Total bases in total CDS fr_cds_A Frequency of 'A' bases among total CDS bases fr_cds_T Frequency of 'T' bases among total CDS bases fr_cds_C Frequency of 'C' bases among total CDS bases fr_cds_G Frequency of 'G' bases among total CDS bases fr_cds_N Frequency of 'N' bases among total CDS bases GC_cds Percentage of 'G' and 'C' bases in total CDS topo_entropy_cds Topological entropy calculated from total CDS sequences chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS shannon_cds Shannon entropy score for total CDS bp_cds_overlap_tot Number of bases overlapping between CDS on two strands bp_cds_intron_A Number of 'A' bases in total introns between CDS bp_cds_intron_T Number of 'T' bases in total introns between CDS bp_cds_intron_C Number of 'C' bases in total introns between CDS bp_cds_intron_G Number of 'G' bases in total introns between CDS bp_cds_intron_N Number of 'N' bases in total introns between CDS bp_cds_intron_tot Total bases in total introns between CDS fr_cds_intron_A Frequency of 'A' bases in total introns between CDS fr_cds_intron_T Frequency of 'T' bases in total introns between CDS fr_cds_intron_C Frequency of 'C' bases in total introns between CDS fr_cds_intron_G Frequency of 'G' bases in total introns between CDS fr_cds_intron_N Frequency of 'N' bases in total introns between CDS GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS shannon_cds_intron Shannon entropy score for total introns between CDS bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands n_ncRNA_pos Number of ncRNA in the positive strand n_ncRNA_neg Number of ncRNA in the negative strand n_ncRNA_tot Total number of ncRNA in the whole sequence bp_ncRNA_A Number of 'A' bases in total ncRNA bp_ncRNA_T bp_ncRNA_T bp_ncRNA_C Number of 'C' bases in total ncRNA bp_ncRNA_G Number of 'G' bases in total ncRNA bp_ncRNA_N Number of 'N' bases in total ncRNA bp_ncRNA_tot Total bases in total ncRNA fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA shannon_ncRNA Shannon entropy score for total ncRNA bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands bp_nc_intron_A Number of 'A' bases in total introns between ncRNA bp_nc_intron_T Number of 'T' bases in total introns between ncRNA bp_nc_intron_C Number of 'C' bases in total introns between ncRNA bp_nc_intron_G Number of 'G' bases in total introns between ncRNA bp_nc_intron_N Number of 'N' bases in total introns between ncRNA bp_nc_intron_tot Total bases in total introns between ncRNA fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA shannon_nc_intron Shannon entropy score for total introns between ncRNA bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands n_tRNA_pos Number of tRNA in the positive strand n_tRNA_neg Number of tRNA in the negative strand n_tRNA_tot Total number of tRNA in the whole sequence bp_tRNA_A Number of 'A' bases in total tRNA bp_tRNA_T Number of 'T' bases in total tRNA bp_tRNA_C Number of 'C' bases in total tRNA bp_tRNA_G Number of 'G' bases in total tRNA bp_tRNA_N Number of 'N' bases in total tRNA bp_tRNA_tot Total bases in total tRNA fr_tRNA_A Frequency of 'A' bases among total tRNA bases fr_tRNA_T Frequency of 'T' bases among total tRNA bases fr_tRNA_C Frequency of 'C' bases among total tRNA bases fr_tRNA_G Frequency of 'G' bases among total tRNA bases fr_tRNA_N Frequency of 'N' bases among total tRNA bases GC_tRNA Percentage of 'G' and 'C' bases in total tRNA topo_entropy_tRNA Topological entropy calculated from total tRNA sequences chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA shannon_tRNA Shannon entropy score for total tRNA bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands n_rRNA_pos Number of rRNA in the positive strand n_rRNA_neg Number of rRNA in the negative strand n_rRNA_tot Total number of rRNA in the whole sequence bp_rRNA_A Number of 'A' bases in total rRNA bp_rRNA_T Number of 'T' bases in total rRNA bp_rRNA_C Number of 'C' bases in total rRNA bp_rRNA_G Number of 'G' bases in total rRNA bp_rRNA_N Number of 'N' bases in total rRNA bp_rRNA_tot Total bases in total rRNA fr_rRNA_A Frequency of 'A' bases among total rRNA bases fr_rRNA_T Frequency of 'T' bases among total rRNA bases fr_rRNA_C Frequency of 'C' bases among total rRNA bases fr_rRNA_G Frequency of 'G' bases among total rRNA bases fr_rRNA_N Frequency of 'N' bases among total rRNA bases GC_rRNA Percentage of 'G' and 'C' bases in total rRNA topo_entropy_rRNA Topological entropy calculated from total rRNA sequences chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA shannon_rRNA Shannon entropy score for total rRNA bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands ATG ATG AAG AAG GTA GTA ACT ACT GCA GCA GAG GAG GCT GCT ATT ATT TCC TCC TGG TGG AAT AAT GAA GAA TCA TCA ACG ACG AGT AGT AAC AAC TCT TCT GTG GTG TTC TTC TTT TTT CTG CTG GGT GGT CTC CTC GAT GAT CAG CAG ACC ACC CTA CTA TTG TTG TAT TAT GGA GGA ATC ATC CTT CTT GTC GTC ATA ATA ACA ACA GAC GAC CAC CAC CCC CCC TAC TAC GCC GCC AGC AGC CGC CGC AAA AAA GGC GGC TGC TGC GTT GTT GGG GGG AGA AGA TGT TGT CAT CAT TCG TCG GCG GCG TTA TTA CCT CCT AGG AGG CCA CCA TAG TAG CGG CGG CCG CCG CGT CGT CAA CAA TAA TAA TGA TGA CGA CGA
GCF_013100865.1NC_048298NC_048298.1Trachemys scripta elegans isolate TJP31775 chromosome 1; CAS_Tse_1.0; whole genome shotgun sequence.95965810962215147200972072190501112732823476608270.280.280.210.210.030.410.95050.00260.99741.96691510141429244665036749070543352315193600054735335721704865480.260.280.220.220.010.440.92710.09110.91681.9725578261293114324361167211992249945321978963440837480.290.240.220.2400.460.86620.31350.7481.94413863540212937519631266032102711423925479771291871860.270.30.210.2100.420.90670.13380.88131.9551016419936313390812563210224110533904671200.290.250.220.2400.460.87330.2550.78951.9533016805061704389123351112456565532859193900.280.290.210.2200.420.91180.11650.89581.96620221234473605629809025160.190.240.250.3200.570.89010.25680.77851.966201012219413701190.180.160.340.3100.660.84790.12450.8831.9265035295369601264920763256533321023903240272139925111246253652223575728218344238502264428173260452480742232122472402624370398612055415154243121730825193254862201715551177712823620598194531888017172225472445073834065318334209281696316866307791897720281595077501556721734206962636577798596792357682650310413196936421
GCF_013100865.1NC_048299NC_048299.1Trachemys scripta elegans isolate TJP31775 chromosome 2; CAS_Tse_1.0; whole genome shotgun sequence.7818074278197581586038405861476395014772830984030.280.280.210.210.030.410.95080.00020.99981.9661986111120973743097539429969280003542872250328616521364454530.270.280.220.220.010.440.92920.07180.93291.9669186987998801679875019709910697103749273130313060.290.240.220.2500.470.86490.31370.74831.942112844822230239993211516712162633017919561032581720.270.30.210.2100.420.90590.13360.88141.9510137181318127544119752908819525104334280.290.250.220.2400.460.87330.26950.78011.9496016632001679212120998912353926894458567370.280.30.210.210.010.420.90830.12220.89141.9581011617258317300395012700.20.250.230.3100.550.8780.25380.78531.97230000000000NANANANANANANANANANA024910285079412153851989526692181341688515584183731812028490175806014143981777415970201961707017605303399328155401814730585146811052917198121761973016233158441070712357209741595014127135731204716821199606318307531455115567125401334323697135161437547536727113351643116612199125638726367364364197577712146205132
GCF_013100865.1NC_048300NC_048300.1Trachemys scripta elegans isolate TJP31775 chromosome 3; CAS_Tse_1.0; whole genome shotgun sequence.5638504156344506417274604171258150699312012395190.280.280.210.210.030.410.9510.00050.99951.969871974514642815903629679803207976422132500715400671015015550.270.290.210.220.010.430.93070.06710.93671.97341099759758311806760165554485073575532562622921030.30.250.210.2400.450.86660.3080.75221.94380216049862296655015887504162360461091307777863930.280.310.20.2100.410.90740.12830.88521.952701031292328172877642610176403202844190.290.250.220.2400.460.87270.26840.78131.95010141640714393091056190107240711220750965200.280.290.210.210.010.420.91080.12160.89241.9631081018251320354435013600.180.240.260.3200.580.87540.23620.79841.96070000000000NANANANANANANANANANA0191732141374971189414725194071360713684110731414314379227871346438361129513406128961436413020145142182173841155314904224571022086541393898101518611873128007989101631593211799101459026895911514142814135248569816114691047689011846110377113203283439693461208611521144564659460043203056156446508117013824
GCF_013100865.1NC_048301NC_048301.1Trachemys scripta elegans isolate TJP31775 chromosome 4; CAS_Tse_1.0; whole genome shotgun sequence.3855255338431542302048723015887549957081423435500.270.270.210.210.040.420.95080.00230.99771.96937838271610204828052167042916172909166551331693988766752640.260.270.220.230.010.450.92880.07540.92931.9721768736466801326645970526447561584591938323259420.280.230.230.2600.490.86570.31710.74621.94520147776481581036411524318118378231192684551428370.260.290.220.2300.440.90330.15210.86681.95710991022016951466700566775751502504060.270.250.230.2400.480.8760.250.79311.958108621498743916628336677236916231362580.270.290.220.2200.440.91090.13740.87851.9688081018285322324424013550.210.240.240.3100.550.87850.24220.78951.97210000000000NANANANANANANANANANA01872121332630811687153322193414576113311304414986122582026913081497110664131431243016161134171156924976697413257133302400512470776312541796915664130481109288348027153771269211382125958946142311580255112105211755126478648115191753810106106143855533375021289413226161633968671056303438142915136115214283
GCF_013100865.1NC_048302NC_048302.1Trachemys scripta elegans isolate TJP31775 chromosome 5; CAS_Tse_1.0; whole genome shotgun sequence.3948160839479989287695682876374539161761404110860.280.280.20.20.030.410.94970.00010.99991.9665466517983179924371894341313106729134894871149202646812680.270.280.210.220.010.430.93010.06480.93871.9698403380409789435772355353323240353120214674870.30.250.210.2400.450.86690.31210.74951.94273131635651399551195428119796303810191473083810.280.310.20.2100.40.90730.12550.88771.9507076791555402250257399834201201862740.290.250.220.2300.450.86930.27880.7731.94850101207510272147175067248353864035202700.290.30.20.2100.410.90740.12680.88831.96010481219621320527608900.220.240.230.3100.540.88370.24290.79161.97540000000000NANANANANANANANANANA012114139034769776894991235485098647717689969628145888731245372148528796994238383911113839455872159424143496550545490706084955176598182508865241060974566530580856147220893123941604761907287653456781195271227392201626746035762173519101324430092853198210291435777302335
GCF_013100865.1NC_048303NC_048303.1Trachemys scripta elegans isolate TJP31775 chromosome 6; CAS_Tse_1.0; whole genome shotgun sequence.3643482336509645266490312667024234119501296756910.280.280.210.210.030.410.950.00140.99861.967848445293617204278181643121255679912931529975702618326200.280.290.210.220.010.430.93080.06560.93791.969453574369358727411943336865297036326301013721450.30.250.210.2400.450.86750.30540.75351.9440130398081388912294987339755041672475468551790.280.310.20.200.40.90790.12250.88971.9518098701686071657711439704543402078310.290.260.220.2300.450.87230.27130.77821.94760107398710990357713717799861455237389310.280.30.210.2100.420.90950.1220.89231.9638053811115814317805900.190.270.240.300.540.89160.28610.75681.972701012426343501190.20.220.290.2900.580.87470.05450.94731.9810117951290147977405881311063799285236366831492831387783252160702680247700861477308711125654260668792131311759095203840262149027720976204713631197876768595749705459650380652188154015525672463165107111996468708918282381588668916696859829782511255318689745414773332204
GCF_013100865.1NC_048304NC_048304.1Trachemys scripta elegans isolate TJP31775 chromosome 7; CAS_Tse_1.0; whole genome shotgun sequence.3447757634429739268021212674323543560621268087330.270.270.210.210.030.420.95160.00180.99821.9696136481261201681702135789015724927162179091595260750641560.250.270.230.240.020.460.92730.07510.92951.9672252725155351050499389409819449146473621218319770.280.230.230.2600.490.86480.31340.74831.9416015195003162062211167714012012190926577560171310.260.290.220.2300.450.90050.15720.86371.9511068791475035948260401004254001812590.280.240.230.2500.480.86870.27780.7761.9422068419770255952560953410711199425584660.270.280.220.220.010.440.90880.12920.88581.9645063914817716121607020.210.250.230.3100.540.8920.26780.77421.96870000000000NANANANANANANANANANA0144121682248948561119611747211211891999751218394931533799293980775610067935313047101969041201845760100141071318654983958779434628012258101728751702261111157010439896910611730212183127404909162771041610389683897341291876278463313046755580108851003312823299555635015281310890401486463335
GCF_013100865.1NC_048305NC_048305.1Trachemys scripta elegans isolate TJP31775 chromosome 8; CAS_Tse_1.0; whole genome shotgun sequence.2953652729622883229644392306330841208201093079770.270.270.210.210.040.420.95120.00360.99641.96715265201046155091161637553912118608124763371321587578011870.260.280.220.230.020.440.930.06840.93541.9683215974564278834400983576523599113851482915428380.290.230.220.2500.480.86570.3160.74691.94410117164741249704490812089333163833686434615750.270.30.210.2200.430.90440.14040.87561.9545060711314495242326346653514201570850.290.250.220.2400.460.87250.2630.78691.950904770264772863659633644321623817009450.280.290.220.2200.430.91160.120.89231.970301234356567402290.20.250.230.3200.550.82970.2880.75131.96390000000000NANANANANANANANANANA012766144524613755210131135429537826682211000888601407185123190734789218306104638673834115422483083409305160817745552784725882102978134779157656079103808309709574226017863810245302914677743381326202681011868670871662483328754288583849810481286937993468219910212389878372895
GCF_013100865.1NC_048306NC_048306.1Trachemys scripta elegans isolate TJP31775 chromosome 9; CAS_Tse_1.0; whole genome shotgun sequence.2853764328506762223164442230973033019271049725060.270.270.210.210.030.430.9510.00070.99931.97134985401038141055551486885511112064114060651120542526130810.260.270.220.230.020.450.92930.07020.93371.967117383401436837385591318750327322347711313793770.290.230.230.2600.480.86660.31420.74771.94670100438681070080079244388097583763812375305010.260.290.220.2300.440.90460.14190.87451.9579076821585162247727394664091801797330.290.250.230.2400.460.87070.25830.78851.953607099507135085276855379444473025338170.270.290.210.220.010.430.90870.12480.89041.9601122739414901560.180.240.260.3200.580.86080.36830.70341.949800112220403701190.180.170.340.3100.650.86820.08660.9171.93540114531267339526720914412559837972397528902477141218577632979620780047436940380057563144964331769481721464568844630754751389593778868645251497591147502650667515383820990552920123326815744954116481102346043647423213055461677967471966223493573317919808577309465952574
GCF_013100865.1NC_048307NC_048307.1Trachemys scripta elegans isolate TJP31775 chromosome 10; CAS_Tse_1.0; whole genome shotgun sequence.229310032293179618520598185254582921056858299110.270.270.220.220.030.430.95170.00010.99991.9723487493980133080871413180410712973110590631012117502240440.260.270.220.230.020.450.93010.07120.93281.971887898407417824438937359306376398397659015723000.280.230.230.2500.480.86710.30390.75471.9481097255861045202177801618021397650990366301550.260.290.220.2300.440.90390.14280.87351.958054541084246639967341203600201525550.280.240.230.2500.480.87460.25570.78991.956205713065842414471054565134291221020770.280.290.210.220.010.430.91020.11780.8951.96570661216121423228008870.180.240.260.3100.580.88750.2360.79411.95870000000000NANANANANANANANANANA012219144124251765710341145959773770488491044983951427090123466724289618827104718951805716679483287299268165307874515183595723105928593789057365366102548630742179926017928210675348814193801984696140716511922681374772771365651538941849010919276142413853242710020372381213110
GCF_013100865.1NC_048308NC_048308.1Trachemys scripta elegans isolate TJP31775 chromosome 11; CAS_Tse_1.0; whole genome shotgun sequence.212307322121589915838960158526901909616760478970.280.280.210.210.030.420.95110.00080.99921.9707313316629116823171230446487074848956075775022424253620.270.280.220.220.020.440.93050.06330.941.966420248261509346497277668259509281855111655300.30.240.220.2500.460.86640.31770.74571.941908754986930984864805036637635496493316794650.280.310.20.2100.410.90340.13820.8781.945404939883424132215261512678701193940.290.250.230.2400.460.86850.24830.79711.949503896013951652877312897272624113884650.280.290.210.2200.430.90950.12140.89321.9634032567959211503690.180.260.250.3100.560.88780.28630.75511.9630000000000NANANANANANANANANANA01010811579396358567702964266546804573768967330112567169226856526824611777486341663811383394258747051116585084450074974547786760376052407253248463574654104820451058056961197812719484353625037462592704973579617212238514261995927769326402514240016258149346356791908
GCF_013100865.1NC_048309NC_048309.1Trachemys scripta elegans isolate TJP31775 chromosome 12; CAS_Tse_1.0; whole genome shotgun sequence.1152595311468673967109496882202707562450615020.260.250.210.210.060.430.95240.00340.99661.95894354488834785675506249541336934230748612861188254720.240.270.250.230.010.480.91620.13190.88161.96931018383401784255058235430268871256704310160660.260.220.250.2700.520.86540.31970.74431.942103364470360244828675632949677463399132475570.240.270.240.250.010.480.89640.18160.84581.95180353368227232157320265202560848170.260.240.250.2500.50.86860.26590.78391.9468020673820869516255516496996917526480.260.270.230.2400.470.9040.14380.87481.968502134356526602170.20.260.240.300.540.86430.28280.76691.95480000000000NANANANANANANANANANA087858063233348436168881163474831730460044445650951542522393858905328823280035030134393177769146249452728933034874367060337960459248313400613756145166673745717674674024197018559062953546590063024256414518532626277355135852675011693139305414395052141340641691
GCF_013100865.1NC_048310NC_048310.1Trachemys scripta elegans isolate TJP31775 chromosome 13; CAS_Tse_1.0; whole genome shotgun sequence.1170878411596357915089990951702165466437166760.270.270.210.210.050.420.95170.00790.99221.96042242464705940518630539348234424989062517964225763790.250.270.230.230.020.460.92920.07080.93311.967485017119636717549414472716034916829406488640.270.230.240.2600.50.86620.29760.75861.947804030677432062832491033361065284975152464480.250.280.230.2400.460.90260.14730.87021.95390372966265872486820162206370922540.290.250.220.2400.460.87590.24810.7941.949805919496106824314864367835227721231770.280.290.210.210.010.420.91550.09930.911.956063912115917421806720.190.240.250.3200.570.84970.28320.75841.95990000000000NANANANANANANANANANA0509760051760303842586459408631263665400632445346342215822786375832274788365233077253183537633619720834312036326420714213359231792422213041253867324735442546442347281645526036213638248332064469279430561282182719933608360243069922058190010493865129429441210
GCF_013100865.1NC_048311NC_048311.1Trachemys scripta elegans isolate TJP31775 chromosome 14; CAS_Tse_1.0; whole genome shotgun sequence.1048428410501159922963092140692791940422210820.250.250.220.220.070.440.94790.00160.99841.95714014218225952126624715853689265499964935480240036540.240.260.240.240.010.480.9190.1170.89481.9702423438336341677277051230380268488277070110529900.270.220.240.2700.510.86430.33280.73481.943203644632392274732030603285489295578143515060.250.280.230.2400.470.90170.15880.86111.96440324072173471647315115161640650990.260.230.240.2600.510.87180.27910.77231.9509012874313150711152911432750374911430.250.270.230.2500.470.90110.1680.8551.96280141529396514547692021490.190.240.250.3200.570.87220.2980.7511.95670000000000NANANANANANANANANANA07922864220745083591011085703744947196694247207997597324314376599551528585681646991258729646680494911114693228414963321575317446436342953511702959945606704140507350721725788337536460863704655285124221376119192995331659746798657012883512289315015280156342241914
GCF_013100865.1NC_048312NC_048312.1Trachemys scripta elegans isolate TJP31775 chromosome 15; CAS_Tse_1.0; whole genome shotgun sequence.84687248473039712481771325251011012322101170.260.260.220.220.030.440.95280.00080.99921.97662252274525340674571490244132624613467359040204413450.260.270.220.230.010.460.92970.07630.9281.9751106719219238419158215564616853518004386958140.280.230.230.2600.490.86640.31220.74891.94903897955421979331823743321351208261148297340.260.30.210.2300.440.90390.14630.87041.96150222446173721764613494134490619610.270.260.230.2400.470.87580.23050.80551.94350144658147595115252118374150665409450.270.280.220.220.010.440.90990.11320.89681.970102468210111213804330.190.230.260.3200.580.88990.2120.81121.97080000000000NANANANANANANANANANA05401642318623247471670974602338038864589353063223730153331193854372346963730352176392061412040227571349922543526232647613746345726332244428637733309374625554264486016396037356336882715344952772909320912581709205939703881489511062114175211614319145033711499
GCF_013100865.1NC_048313NC_048313.1Trachemys scripta elegans isolate TJP31775 chromosome 16; CAS_Tse_1.0; whole genome shotgun sequence.57612185777877662808966129945265299300454770.190.190.220.220.180.440.95110.00260.99741.87643341885130460373286024366268238062831131126149321520.20.210.270.280.040.550.91680.09550.91151.93173384372339711221517182951307368302451410142910.230.190.290.300.590.85850.32490.74151.92440181939120124872169498227596969584889731930.190.220.280.30.010.570.88130.21980.81531.92550292655156211526617741178940665220.240.210.270.2900.550.87140.28040.77711.93990634226599165911665194252622680.220.240.260.2700.530.8960.15390.86411.96790671318622425331209750.190.230.260.3200.580.88910.26910.77191.9630000000000NANANANANANANANANANA06119791214393405654111532686423227286749924075161426645832976536642077766586524731380432696736369811263740720452968155370155938302245111332469867725493102174079111668843523340708942653321138503546529933275327451981172663964247662724637761752236411780038342769
GCF_013100865.1NC_048314NC_048314.1Trachemys scripta elegans isolate TJP31775 chromosome 17; CAS_Tse_1.0; whole genome shotgun sequence.6901885690096660209466053722953478268309970.260.260.220.230.040.450.95240.00280.99721.97622061733794365573467855238261173962282318794171513180.250.270.230.240.010.470.93040.07360.93031.97665011217214531715996712833715219916010606006090.270.210.240.2700.520.86580.31770.74561.947303266651354247328434442940778185642127789880.250.280.230.2400.460.90530.14470.87161.96810251843136841314711399120230502530.280.240.230.2500.480.87020.22370.81361.95840119763123228975759782556004439910.270.280.220.2200.440.91530.11390.89771.972503146574688602930.220.260.220.300.520.8120.25490.78391.97870000000000NANANANANANANANANANA0449355041407274141765753382424433545402326844754317116572557324831324101318324966804213336363312667833601764275817414422313527592372166037743387292535372127403144331554474834003356198834224460241226071270179715533875370144188712008195810973572109430061370
GCF_013100865.1NC_048315NC_048315.1Trachemys scripta elegans isolate TJP31775 chromosome 18; CAS_Tse_1.0; whole genome shotgun sequence.6501042648366854393385430754917598247724000.260.260.220.220.040.440.95290.00210.99791.97292151984134269985458530735569163725069240741163780180.250.260.230.240.010.470.92610.07970.92561.97176617315733014628112000813782314462415487370.270.220.240.2600.50.86550.30910.75161.945403251774353641326808592807962173377124503850.250.290.220.2300.460.90190.14960.8681.95680332962205291984418007188411772220.270.240.230.2600.490.87820.24670.79731.956301568771549521225721245303645592950.270.270.220.2400.460.90290.15130.86981.963600222433404601430.170.230.280.3200.60.8870.22850.79871.95930000000000NANANANANANANANANANA040764898137123813710553935212410311735642520442828021379229129622834391530132475637716683336296560112891174726941758386030432694213216313453313228283177202838584022150442833024311519802853388123222499108716271511311331433863905179116559083328108327101201
GCF_013100865.1NC_048316NC_048316.1Trachemys scripta elegans isolate TJP31775 chromosome 19; CAS_Tse_1.0; whole genome shotgun sequence.5787018577748351467515129429973034228137150.250.250.230.220.040.450.95370.00250.99751.97251621563183700111395412232432903382434427628147075850.250.260.230.240.020.460.92970.07250.93141.9669014112626712097610046312220312587904695210.260.220.250.2700.520.86650.30480.75431.950302545490275991422419822337237289741101743640.240.280.230.240.010.470.90510.14410.8721.96230162339160681463012677133960567710.290.230.240.2400.480.88080.27650.77551.95708043779136653486585348032955770.270.280.220.230.010.450.90860.13290.88351.965601122838344601460.190.260.230.3200.550.87470.30150.7381.97690000000000NANANANANANANANANANA03480406510282062313645312950189230113314186935362518144519932568241933472648197253811518288123784848279413452150128032232748201920541211268627492393297318513424359813933337275528841539258433901986190010671547107428132820356166917731577915254982023711043
GCF_013100865.1NC_048317NC_048317.1Trachemys scripta elegans isolate TJP31775 chromosome 20; CAS_Tse_1.0; whole genome shotgun sequence.4791667483232645177614517898708748193684000.250.250.230.230.040.470.95370.00420.99581.9779148159307220587723817332089266218813417049290355020.240.260.240.250.010.490.92880.07960.92491.977473971291262551049048276210789611131514068780.260.210.250.2800.530.86440.33150.73651.94080151008016559371434473149873111823862174590.240.270.240.2500.490.90320.15930.861.9643017264393669419921791670371690.250.240.260.2500.510.87510.23660.80341.96530789928395071463738217363089620.250.270.230.2500.480.90480.14270.87221.9760011132315210720.180.320.210.2900.50.86820.44440.63981.96170000000000NANANANANANANANANANA02814368088316992768428625901546269427751493322121541236167421412104270222231522443912622518213747152407111017259963000226716321563976232223611987287815263045311013243011273323021266249829251525165797413998802426249132295131719161776122225011843940
GCF_013100865.1NC_048318NC_048318.1Trachemys scripta elegans isolate TJP31775 chromosome 21; CAS_Tse_1.0; whole genome shotgun sequence.4907143484414743325004290068675361190492190.260.250.230.230.040.450.9530.01140.98871.97671301082382749017294306724753862568110251839109874190.240.260.230.240.020.480.92670.08430.92141.9727442011019419582262682138703886556173240860.260.210.260.2700.530.8680.31310.75011.94910196335121287181761540182716617835278591270.240.270.230.250.010.480.90440.15440.86361.967202373089989329822892500358050.260.250.240.2500.490.87990.22660.80631.970208565986148728447360248683231210.240.270.220.2600.480.90270.21720.82131.964402135158476202180.230.270.220.2800.50.88090.22480.8061.985502138177847891054034440.210.190.30.300.60.88050.13830.87381.958902429262568015462309300621071212225223111254224819651001137117241688235218021208354210102111156434932025927148979223071770134313857362136174716532318114223882448954202019411952973190423771307134872510347312114200427104651148114060017055061629769
GCF_013100865.1NC_048319NC_048319.1Trachemys scripta elegans isolate TJP31775 chromosome 22; CAS_Tse_1.0; whole genome shotgun sequence.37840893787975385073938400691176735164396070.230.230.230.230.070.470.95180.00190.99811.9563182174356219521023701542214595230268839529794779440.230.240.250.260.020.50.92720.08520.92031.9636101041571523091181589413513415613539304818420.260.20.260.2800.540.86340.32620.74121.93640147773716298701485005153995832683864594080.220.260.250.260.010.510.89830.17530.84791.95310141630120011116410687109140447660.270.230.250.2500.50.87450.25240.79271.95890726997492069747708695402887750.250.270.240.2500.490.91160.13050.88331.9857032571859411603660.190.230.260.3200.570.88070.19950.82541.97170000000000NANANANANANANANANANA03292415392819173259514231801430327033961616332222981819182527482132341425911533576514573269218852143078129117971046342427531817203592525433103244437141827432442531837287933942882130931563158165319131300194388531343021352351923182055999243359720491285
GCF_013100865.1NC_048320NC_048320.1Trachemys scripta elegans isolate TJP31775 chromosome 23; CAS_Tse_1.0; whole genome shotgun sequence.36550093687767365998936900421381825160746320.230.230.230.230.090.460.94770.00860.99151.94661611553162442258259278924588592524757676495106951580.230.250.240.260.020.50.92580.08190.92331.966101371322691026328179411467211645704155550.250.20.270.2800.550.86120.32110.74351.93580167647518078431652269169768528262971169010.220.250.250.270.010.520.89620.17230.85071.95109142390649221820982620347560.250.230.250.2600.520.88240.2510.79141.956503406936321319083335721356570.240.270.240.2600.490.90680.15430.86791.9755026812514114017605820.210.240.240.300.540.87840.19140.83081.98180000000000NANANANANANANANANANA0272137167561594262447282849134828932697138629831950144915232416191029852358139748801604263120334514272994615371116299524061515177481622822898210233441679358135271567252230422418112825762672138415781124159274425322528291744318331763844204453417681035
GCF_013100865.1NC_048321NC_048321.1Trachemys scripta elegans isolate TJP31775 chromosome 24; CAS_Tse_1.0; whole genome shotgun sequence.30857693086032331755633161362343457151489500.20.20.220.220.150.440.94510.00030.99971.8948173234407146810815757171672658171500045148468829670.210.230.260.260.030.520.9190.09890.90891.949329131492013501061679055613973113759144740490.230.190.290.2900.580.86180.31420.74871.9316084273192741094868897800931536840122060.20.240.270.280.010.550.88770.21410.8211.9374013112473287398780878930304270.240.220.260.2900.540.86740.32090.7471.910191471989518222184152888785670.230.240.250.260.020.520.88940.20240.83111.946301122632395101480.180.220.260.3400.610.890.23680.78891.954900113337384501530.220.240.250.2900.540.89290.14150.86821.99090320538647191833326549283283108934843683129822762465212415462441222836932811133459281468306218544928345810171766883301529781446213671124852928241344081765500638212007207336613332117236162877154514841501216065630713409380439427812576921176542919491123
GCF_013100865.1NC_048322NC_048322.1Trachemys scripta elegans isolate TJP31775 chromosome 25; CAS_Tse_1.0; whole genome shotgun sequence.1508237150436415151571510015109299971307720.210.210.210.210.150.420.93920.0030.9971.8967149129278130508313315361306588130713470538259557230.230.240.240.270.020.510.90740.13940.87611.958818387635111443194309124546546882101664630.230.180.290.3100.590.85640.30160.75681.927102769602982292990652986997958912525420.20.230.280.290.010.570.87710.25410.7911.92350241640123691243911765121140486870.250.230.250.2800.520.87230.27270.77451.948305146256001533605270739532174830.240.260.240.250.010.490.90070.18440.83911.9634057541111879213518422379082350.230.260.220.2900.510.88710.22870.80171.98050000000000NANANANANANANANANANA0116699022263478420411676367128695060012461212468811928509160679838218653449005101996112827634135815741238493609381134987811291375471130613416421323996892379132019174637292837056881227965800122740666326616115496321
NANC_011573NC_011573.1Trachemys scripta mitochondrion; complete genome.57624537435021610168100.340.270.260.1300.390.92410.45510.64211.92461211336593295301914470114200.320.30.260.1300.390.88320.55020.60741.890339617188418761576871062070.30.30.250.1400.40.8780.58050.59051.883431100001100000NA1000000000000NANANANANANANANANANA0000000NANANANANANANANANANA063921219612511106440.330.30.190.1700.370.86460.31050.74431.9210000000000NANANANANANANANANANA02434745476299431731276339513619686111194215346112233357734019102742731194154121053481120221102444971816600344754621