| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NA | NC_007548 | NC_007548.1 | Adult diarrheal rotavirus strain J19; complete genome. | 1320 | 1057 | 574 | 587 | 0 | 3538 | 0.37 | 0.3 | 0.16 | 0.17 | 0 | 0.33 | 0.9061 | 0.1218 | 0.8893 | 1.9071 | 1 | 0 | 1 | 1309 | 1049 | 565 | 581 | 0 | 3504 | 0.37 | 0.3 | 0.16 | 0.17 | 0 | 0.33 | 0.9063 | 0.1242 | 0.8869 | 1.9059 | 0 | 1 | 0 | 1 | 1309 | 1049 | 565 | 581 | 0 | 3504 | 0.37 | 0.3 | 0.16 | 0.17 | 0 | 0.33 | 0.9063 | 0.1242 | 0.8869 | 1.9059 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 35 | 14 | 22 | 29 | 30 | 17 | 29 | 41 | 8 | 8 | 58 | 52 | 47 | 9 | 5 | 15 | 30 | 8 | 11 | 34 | 6 | 21 | 7 | 38 | 10 | 8 | 18 | 21 | 47 | 15 | 7 | 11 | 10 | 49 | 29 | 17 | 3 | 3 | 14 | 10 | 4 | 2 | 77 | 4 | 2 | 31 | 1 | 27 | 2 | 16 | 4 | 11 | 52 | 7 | 7 | 25 | 0 | 0 | 4 | 6 | 33 | 1 | 0 | 6 |
| NA | NC_007549 | NC_007549.1 | Adult diarrheal rotavirus strain J19; complete genome. | 1035 | 915 | 485 | 534 | 0 | 2969 | 0.35 | 0.31 | 0.16 | 0.18 | 0 | 0.34 | 0.9044 | 0.1096 | 0.8961 | 1.9255 | 1 | 0 | 1 | 1021 | 903 | 472 | 526 | 0 | 2922 | 0.35 | 0.31 | 0.16 | 0.18 | 0 | 0.34 | 0.9039 | 0.1154 | 0.8909 | 1.9238 | 0 | 1 | 0 | 1 | 1021 | 903 | 472 | 526 | 0 | 2922 | 0.35 | 0.31 | 0.16 | 0.18 | 0 | 0.34 | 0.9039 | 0.1154 | 0.8909 | 1.9238 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 35 | 11 | 16 | 22 | 30 | 10 | 29 | 45 | 3 | 5 | 48 | 37 | 31 | 10 | 3 | 13 | 24 | 15 | 11 | 36 | 7 | 8 | 4 | 66 | 9 | 6 | 13 | 14 | 18 | 12 | 11 | 19 | 2 | 20 | 13 | 11 | 2 | 1 | 7 | 6 | 1 | 1 | 37 | 4 | 1 | 38 | 1 | 52 | 4 | 8 | 1 | 4 | 38 | 12 | 4 | 33 | 0 | 3 | 3 | 5 | 39 | 1 | 0 | 1 |
| NA | NC_007551 | NC_007551.1 | Adult diarrheal rotavirus strain J19; complete genome. | 809 | 723 | 314 | 358 | 0 | 2204 | 0.37 | 0.33 | 0.14 | 0.16 | 0 | 0.3 | 0.8997 | 0.1216 | 0.8854 | 1.8847 | 1 | 0 | 1 | 795 | 709 | 306 | 350 | 0 | 2160 | 0.37 | 0.33 | 0.14 | 0.16 | 0 | 0.3 | 0.8992 | 0.1243 | 0.8831 | 1.8831 | 0 | 1 | 0 | 1 | 795 | 709 | 306 | 350 | 0 | 2160 | 0.37 | 0.33 | 0.14 | 0.16 | 0 | 0.3 | 0.8992 | 0.1243 | 0.8831 | 1.8831 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 22 | 6 | 15 | 12 | 3 | 12 | 10 | 37 | 1 | 7 | 38 | 26 | 33 | 5 | 12 | 13 | 15 | 6 | 7 | 35 | 6 | 8 | 2 | 38 | 6 | 4 | 6 | 12 | 30 | 10 | 8 | 6 | 1 | 21 | 19 | 8 | 5 | 1 | 11 | 3 | 2 | 2 | 43 | 4 | 2 | 14 | 0 | 22 | 4 | 16 | 3 | 2 | 30 | 6 | 7 | 14 | 1 | 1 | 3 | 9 | 14 | 0 | 0 | 1 |
| NA | NC_007550 | NC_007550.1 | Adult diarrheal rotavirus strain J19; complete genome. | 939 | 729 | 395 | 449 | 0 | 2512 | 0.37 | 0.29 | 0.16 | 0.18 | 0 | 0.34 | 0.9014 | 0.1899 | 0.828 | 1.9123 | 1 | 0 | 1 | 923 | 718 | 389 | 442 | 0 | 2472 | 0.37 | 0.29 | 0.16 | 0.18 | 0 | 0.34 | 0.9006 | 0.1887 | 0.829 | 1.9126 | 0 | 1 | 0 | 1 | 923 | 718 | 389 | 442 | 0 | 2472 | 0.37 | 0.29 | 0.16 | 0.18 | 0 | 0.34 | 0.9006 | 0.1887 | 0.829 | 1.9126 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18 | 9 | 11 | 27 | 22 | 11 | 18 | 28 | 6 | 4 | 38 | 31 | 29 | 10 | 14 | 15 | 13 | 9 | 8 | 33 | 7 | 12 | 3 | 44 | 7 | 3 | 8 | 11 | 27 | 26 | 10 | 8 | 4 | 22 | 30 | 9 | 3 | 2 | 11 | 3 | 5 | 2 | 48 | 3 | 2 | 22 | 3 | 28 | 4 | 10 | 4 | 2 | 28 | 8 | 2 | 13 | 1 | 1 | 4 | 1 | 27 | 0 | 0 | 2 |
| NA | NC_007552 | NC_007552.1 | Adult diarrheal rotavirus strain J19; complete genome. | 475 | 381 | 210 | 241 | 0 | 1307 | 0.36 | 0.29 | 0.16 | 0.18 | 0 | 0.35 | 0.9069 | 0.1785 | 0.8367 | 1.9227 | 1 | 0 | 1 | 445 | 339 | 189 | 215 | 0 | 1188 | 0.37 | 0.29 | 0.16 | 0.18 | 0 | 0.34 | 0.9047 | 0.1996 | 0.8204 | 1.9151 | 0 | 1 | 0 | 1 | 445 | 339 | 189 | 215 | 0 | 1188 | 0.37 | 0.29 | 0.16 | 0.18 | 0 | 0.34 | 0.9047 | 0.1996 | 0.8204 | 1.9151 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 13 | 7 | 1 | 7 | 6 | 6 | 9 | 13 | 1 | 7 | 18 | 19 | 12 | 1 | 5 | 7 | 7 | 6 | 7 | 14 | 2 | 3 | 2 | 7 | 2 | 1 | 0 | 5 | 10 | 17 | 4 | 3 | 2 | 12 | 13 | 7 | 4 | 2 | 7 | 1 | 3 | 0 | 27 | 0 | 5 | 9 | 0 | 10 | 15 | 11 | 1 | 1 | 9 | 4 | 0 | 9 | 0 | 0 | 1 | 1 | 16 | 1 | 0 | 3 |
| NA | NC_007553 | NC_007553.1 | Adult diarrheal rotavirus strain J19; complete genome. | 421 | 377 | 229 | 260 | 0 | 1287 | 0.33 | 0.29 | 0.18 | 0.2 | 0 | 0.38 | 0.916 | 0.1185 | 0.8881 | 1.9555 | 1 | 0 | 1 | 396 | 351 | 211 | 233 | 0 | 1191 | 0.33 | 0.29 | 0.18 | 0.2 | 0 | 0.37 | 0.9142 | 0.1098 | 0.896 | 1.9505 | 0 | 1 | 0 | 1 | 396 | 351 | 211 | 233 | 0 | 1191 | 0.33 | 0.29 | 0.18 | 0.2 | 0 | 0.37 | 0.9142 | 0.1098 | 0.896 | 1.9505 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10 | 1 | 5 | 10 | 15 | 6 | 12 | 27 | 3 | 4 | 28 | 10 | 12 | 4 | 1 | 5 | 7 | 4 | 2 | 10 | 4 | 8 | 1 | 12 | 9 | 0 | 8 | 3 | 8 | 17 | 4 | 4 | 1 | 5 | 15 | 4 | 1 | 2 | 1 | 4 | 2 | 0 | 10 | 0 | 1 | 17 | 1 | 14 | 5 | 6 | 3 | 5 | 12 | 6 | 1 | 14 | 0 | 0 | 1 | 1 | 10 | 0 | 1 | 0 |
| NA | NC_007555 | NC_007555.1 | Adult diarrheal rotavirus strain J19; complete genome. | 358 | 259 | 144 | 171 | 0 | 932 | 0.38 | 0.28 | 0.15 | 0.18 | 0 | 0.34 | 0.9107 | 0.2462 | 0.7828 | 1.9087 | 1 | 0 | 1 | 305 | 218 | 116 | 150 | 0 | 789 | 0.39 | 0.28 | 0.15 | 0.19 | 0 | 0.34 | 0.9118 | 0.2942 | 0.744 | 1.9048 | 0 | 1 | 0 | 1 | 305 | 218 | 116 | 150 | 0 | 789 | 0.39 | 0.28 | 0.15 | 0.19 | 0 | 0.34 | 0.9118 | 0.2942 | 0.744 | 1.9048 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 4 | 7 | 1 | 7 | 3 | 4 | 8 | 15 | 2 | 1 | 13 | 22 | 7 | 0 | 3 | 5 | 4 | 1 | 3 | 7 | 2 | 5 | 1 | 13 | 2 | 3 | 5 | 6 | 5 | 6 | 2 | 5 | 0 | 2 | 6 | 2 | 1 | 0 | 2 | 1 | 1 | 2 | 16 | 3 | 2 | 5 | 0 | 12 | 4 | 4 | 1 | 1 | 8 | 0 | 1 | 5 | 0 | 1 | 0 | 0 | 8 | 0 | 1 | 2 |
| NA | NC_007554 | NC_007554.1 | Adult diarrheal rotavirus strain J19; complete genome. | 362 | 304 | 138 | 200 | 0 | 1004 | 0.36 | 0.3 | 0.14 | 0.2 | 0 | 0.34 | 0.8859 | 0.2705 | 0.7649 | 1.9097 | 1 | 0 | 1 | 324 | 271 | 120 | 179 | 0 | 894 | 0.36 | 0.3 | 0.13 | 0.2 | 0 | 0.33 | 0.8792 | 0.2864 | 0.7534 | 1.9061 | 0 | 1 | 0 | 1 | 324 | 271 | 120 | 179 | 0 | 894 | 0.36 | 0.3 | 0.13 | 0.2 | 0 | 0.33 | 0.8792 | 0.2864 | 0.7534 | 1.9061 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 7 | 5 | 2 | 11 | 8 | 8 | 12 | 15 | 2 | 2 | 11 | 16 | 9 | 1 | 2 | 4 | 9 | 4 | 2 | 10 | 1 | 9 | 0 | 18 | 2 | 0 | 2 | 6 | 4 | 4 | 4 | 3 | 2 | 11 | 3 | 1 | 0 | 1 | 0 | 0 | 2 | 1 | 21 | 0 | 1 | 8 | 1 | 15 | 4 | 5 | 1 | 1 | 9 | 3 | 0 | 7 | 1 | 0 | 0 | 1 | 3 | 0 | 0 | 3 |
| NA | NC_007556 | NC_007556.1 | Adult diarrheal rotavirus strain J19; complete genome. | 288 | 255 | 134 | 143 | 0 | 820 | 0.35 | 0.31 | 0.16 | 0.17 | 0 | 0.34 | 0.8792 | 0.0933 | 0.9112 | 1.9207 | 1 | 0 | 1 | 273 | 247 | 124 | 133 | 0 | 777 | 0.35 | 0.32 | 0.16 | 0.17 | 0 | 0.33 | 0.8778 | 0.085 | 0.9185 | 1.9142 | 0 | 1 | 0 | 1 | 273 | 247 | 124 | 133 | 0 | 777 | 0.35 | 0.32 | 0.16 | 0.17 | 0 | 0.33 | 0.8778 | 0.085 | 0.9185 | 1.9142 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 6 | 3 | 2 | 7 | 5 | 4 | 4 | 10 | 0 | 3 | 11 | 8 | 3 | 1 | 7 | 5 | 7 | 0 | 6 | 6 | 1 | 2 | 1 | 14 | 1 | 3 | 6 | 4 | 7 | 8 | 2 | 3 | 4 | 8 | 8 | 6 | 1 | 0 | 5 | 3 | 1 | 0 | 14 | 1 | 0 | 10 | 0 | 4 | 8 | 5 | 2 | 0 | 11 | 2 | 0 | 6 | 0 | 0 | 0 | 1 | 7 | 0 | 1 | 1 |
| NA | NC_007557 | NC_007557.1 | Adult diarrheal rotavirus strain J19; complete genome. | 278 | 227 | 91 | 143 | 0 | 739 | 0.38 | 0.31 | 0.12 | 0.19 | 0 | 0.32 | 0.8707 | 0.3232 | 0.7265 | 1.8843 | 1 | 0 | 1 | 252 | 200 | 67 | 123 | 0 | 642 | 0.39 | 0.31 | 0.1 | 0.19 | 0 | 0.3 | 0.875 | 0.4098 | 0.6692 | 1.8507 | 0 | 1 | 0 | 1 | 252 | 200 | 67 | 123 | 0 | 642 | 0.39 | 0.31 | 0.1 | 0.19 | 0 | 0.3 | 0.875 | 0.4098 | 0.6692 | 1.8507 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5 | 6 | 4 | 1 | 2 | 7 | 4 | 6 | 1 | 2 | 16 | 11 | 5 | 0 | 3 | 10 | 2 | 5 | 3 | 11 | 1 | 0 | 0 | 13 | 4 | 0 | 2 | 1 | 6 | 2 | 1 | 2 | 4 | 12 | 4 | 1 | 1 | 0 | 0 | 1 | 0 | 0 | 9 | 0 | 0 | 7 | 2 | 9 | 2 | 2 | 1 | 1 | 12 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 5 | 0 | 1 | 0 |
| NA | NC_007558 | NC_007558.1 | Adult diarrheal rotavirus strain J19; complete genome. | 261 | 169 | 103 | 116 | 0 | 649 | 0.4 | 0.26 | 0.16 | 0.18 | 0 | 0.34 | 0.8873 | 0.2733 | 0.7677 | 1.8994 | 1 | 0 | 1 | 230 | 139 | 71 | 91 | 0 | 531 | 0.43 | 0.26 | 0.13 | 0.17 | 0 | 0.31 | 0.8924 | 0.3701 | 0.6923 | 1.8533 | 0 | 1 | 0 | 1 | 230 | 139 | 71 | 91 | 0 | 531 | 0.43 | 0.26 | 0.13 | 0.17 | 0 | 0.31 | 0.8924 | 0.3701 | 0.6923 | 1.8533 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 4 | 3 | 1 | 8 | 1 | 6 | 4 | 4 | 0 | 1 | 6 | 10 | 8 | 1 | 5 | 0 | 5 | 1 | 0 | 2 | 0 | 0 | 0 | 13 | 1 | 0 | 0 | 3 | 3 | 2 | 2 | 3 | 0 | 8 | 6 | 4 | 0 | 0 | 2 | 2 | 2 | 0 | 19 | 0 | 0 | 5 | 0 | 4 | 2 | 1 | 1 | 1 | 8 | 1 | 0 | 2 | 0 | 0 | 0 | 0 | 8 | 1 | 0 | 3 |