| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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| NA | NC_078848 | NC_078848.1 | Aspen mosaic-associated virus viral cRNA for RNA-dependent RNA polymerase (RdRp gene); isolate E55089. | 2634 | 2084 | 1166 | 1221 | 0 | 7105 | 0.37 | 0.29 | 0.16 | 0.17 | 0 | 0.34 | 0.825 | 0.1396 | 0.8731 | 1.9142 | 1 | 0 | 1 | 2565 | 2015 | 1133 | 1198 | 0 | 6911 | 0.37 | 0.29 | 0.16 | 0.17 | 0 | 0.34 | 0.8251 | 0.148 | 0.8657 | 1.9151 | 0 | 1 | 0 | 1 | 2565 | 2015 | 1133 | 1198 | 0 | 6911 | 0.37 | 0.29 | 0.16 | 0.17 | 0 | 0.34 | 0.8251 | 0.148 | 0.8657 | 1.9151 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 64 | 69 | 24 | 50 | 38 | 47 | 31 | 47 | 13 | 8 | 94 | 80 | 55 | 6 | 31 | 62 | 41 | 30 | 37 | 57 | 21 | 29 | 22 | 126 | 28 | 6 | 44 | 44 | 108 | 19 | 50 | 38 | 20 | 98 | 85 | 46 | 17 | 6 | 42 | 7 | 26 | 3 | 116 | 9 | 20 | 48 | 8 | 54 | 21 | 44 | 7 | 3 | 67 | 17 | 28 | 50 | 1 | 1 | 1 | 1 | 29 | 0 | 0 | 9 |
| NA | NC_078847 | NC_078847.1 | Aspen mosaic-associated virus viral cRNA for Glycoproteinprecursor (GPP gene); isolate E55089. | 795 | 690 | 376 | 427 | 0 | 2288 | 0.35 | 0.3 | 0.16 | 0.19 | 0 | 0.35 | 0.9025 | 0.1342 | 0.8742 | 1.9316 | 1 | 0 | 1 | 667 | 585 | 307 | 367 | 0 | 1926 | 0.35 | 0.3 | 0.16 | 0.19 | 0 | 0.35 | 0.9042 | 0.1545 | 0.8568 | 1.93 | 0 | 1 | 0 | 1 | 667 | 585 | 307 | 367 | 0 | 1926 | 0.35 | 0.3 | 0.16 | 0.19 | 0 | 0.35 | 0.9042 | 0.1545 | 0.8568 | 1.93 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 24 | 18 | 18 | 18 | 8 | 7 | 7 | 19 | 1 | 5 | 27 | 20 | 16 | 2 | 8 | 8 | 8 | 7 | 13 | 13 | 2 | 14 | 3 | 29 | 11 | 4 | 4 | 12 | 21 | 9 | 16 | 7 | 10 | 32 | 15 | 10 | 5 | 0 | 17 | 3 | 6 | 0 | 27 | 5 | 11 | 20 | 3 | 13 | 15 | 17 | 1 | 1 | 10 | 8 | 4 | 16 | 0 | 0 | 1 | 0 | 8 | 0 | 1 | 4 |
| NA | NC_078846 | NC_078846.1 | Aspen mosaic-associated virus viral cRNA for nucleoprotein (N gene); isolate E55089. | 587 | 456 | 256 | 288 | 0 | 1587 | 0.37 | 0.29 | 0.16 | 0.18 | 0 | 0.34 | 0.9079 | 0.1844 | 0.8329 | 1.9191 | 1 | 0 | 1 | 317 | 257 | 178 | 205 | 0 | 957 | 0.33 | 0.27 | 0.19 | 0.21 | 0 | 0.4 | 0.8722 | 0.175 | 0.8395 | 1.9649 | 0 | 1 | 0 | 1 | 317 | 257 | 178 | 205 | 0 | 957 | 0.33 | 0.27 | 0.19 | 0.21 | 0 | 0.4 | 0.8722 | 0.175 | 0.8395 | 1.9649 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 8 | 14 | 5 | 16 | 5 | 11 | 19 | 7 | 0 | 2 | 11 | 10 | 8 | 0 | 4 | 9 | 5 | 5 | 6 | 5 | 0 | 3 | 6 | 12 | 5 | 2 | 7 | 6 | 3 | 5 | 3 | 5 | 5 | 11 | 8 | 6 | 3 | 0 | 8 | 1 | 7 | 0 | 11 | 4 | 0 | 11 | 0 | 6 | 2 | 4 | 1 | 1 | 3 | 6 | 6 | 3 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 2 |
| NA | NC_078850 | NC_078850.1 | Aspen mosaic-associated virus viral cRNA for movement protein (MP gene); isolate E55089. | 523 | 462 | 257 | 315 | 0 | 1557 | 0.34 | 0.3 | 0.17 | 0.2 | 0 | 0.37 | 0.9095 | 0.1633 | 0.8496 | 1.9442 | 1 | 0 | 1 | 351 | 292 | 196 | 247 | 0 | 1086 | 0.32 | 0.27 | 0.18 | 0.23 | 0 | 0.41 | 0.909 | 0.2069 | 0.8127 | 1.9679 | 0 | 1 | 0 | 1 | 351 | 292 | 196 | 247 | 0 | 1086 | 0.32 | 0.27 | 0.18 | 0.23 | 0 | 0.41 | 0.909 | 0.2069 | 0.8127 | 1.9679 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15 | 18 | 4 | 7 | 7 | 14 | 15 | 12 | 1 | 4 | 18 | 12 | 6 | 1 | 3 | 7 | 11 | 6 | 10 | 6 | 7 | 8 | 8 | 17 | 10 | 3 | 2 | 6 | 3 | 5 | 8 | 6 | 3 | 5 | 14 | 6 | 2 | 0 | 9 | 1 | 2 | 1 | 10 | 4 | 1 | 8 | 2 | 6 | 0 | 2 | 0 | 0 | 3 | 6 | 7 | 4 | 0 | 0 | 1 | 0 | 4 | 0 | 1 | 0 |
| NA | NC_078849 | NC_078849.1 | Aspen mosaic-associated virus viral cRNA for 28 kDa protein (p28 gene); isolate E55089. | 460 | 414 | 199 | 251 | 0 | 1324 | 0.35 | 0.31 | 0.15 | 0.19 | 0 | 0.34 | 0.9082 | 0.1682 | 0.8464 | 1.9201 | 1 | 0 | 1 | 231 | 216 | 129 | 168 | 0 | 744 | 0.31 | 0.29 | 0.17 | 0.23 | 0 | 0.4 | 0.8912 | 0.1649 | 0.8515 | 1.965 | 0 | 1 | 0 | 1 | 231 | 216 | 129 | 168 | 0 | 744 | 0.31 | 0.29 | 0.17 | 0.23 | 0 | 0.4 | 0.8912 | 0.1649 | 0.8515 | 1.965 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 8 | 7 | 1 | 10 | 5 | 6 | 11 | 13 | 0 | 0 | 3 | 12 | 4 | 0 | 4 | 3 | 8 | 7 | 4 | 10 | 7 | 7 | 3 | 10 | 5 | 1 | 1 | 2 | 6 | 5 | 6 | 1 | 2 | 5 | 4 | 4 | 1 | 0 | 9 | 2 | 6 | 1 | 5 | 1 | 2 | 3 | 1 | 11 | 1 | 5 | 0 | 1 | 2 | 0 | 3 | 6 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 |