| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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| NA | NC_078852 | NC_078852.1 | Common oak ringspot-associated virus segment RNA1; viral cRNA for RNA-dependent RNA polymerase (RdRp gene); strain A72; isolate E54899. | 2831 | 2328 | 937 | 1013 | 0 | 7109 | 0.4 | 0.33 | 0.13 | 0.14 | 0 | 0.27 | 0.8933 | 0.1365 | 0.8736 | 1.8423 | 1 | 0 | 1 | 2771 | 2270 | 916 | 997 | 0 | 6954 | 0.4 | 0.33 | 0.13 | 0.14 | 0 | 0.28 | 0.8935 | 0.1417 | 0.869 | 1.8431 | 0 | 1 | 0 | 1 | 2771 | 2270 | 916 | 997 | 0 | 6954 | 0.4 | 0.33 | 0.13 | 0.14 | 0 | 0.28 | 0.8935 | 0.1417 | 0.869 | 1.8431 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 59 | 49 | 26 | 58 | 29 | 23 | 25 | 62 | 10 | 6 | 149 | 101 | 87 | 4 | 45 | 38 | 55 | 14 | 41 | 78 | 5 | 36 | 12 | 158 | 5 | 9 | 34 | 35 | 109 | 16 | 20 | 42 | 7 | 131 | 62 | 20 | 8 | 1 | 42 | 3 | 12 | 0 | 153 | 6 | 9 | 49 | 0 | 63 | 24 | 34 | 1 | 1 | 98 | 26 | 22 | 33 | 0 | 1 | 2 | 11 | 53 | 1 | 0 | 5 |
| NA | NC_078851 | NC_078851.1 | Common oak ringspot-associated virus segment RNA2; viral cRNA for glycoprotein precursor (GPP gene); strain A72; isolate E54899. | 884 | 748 | 290 | 388 | 0 | 2310 | 0.38 | 0.32 | 0.13 | 0.17 | 0 | 0.29 | 0.887 | 0.2279 | 0.7968 | 1.8652 | 1 | 0 | 1 | 715 | 645 | 248 | 348 | 0 | 1956 | 0.37 | 0.33 | 0.13 | 0.18 | 0 | 0.3 | 0.8886 | 0.2193 | 0.8074 | 1.8794 | 0 | 1 | 0 | 1 | 715 | 645 | 248 | 348 | 0 | 1956 | 0.37 | 0.33 | 0.13 | 0.18 | 0 | 0.3 | 0.8886 | 0.2193 | 0.8074 | 1.8794 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10 | 25 | 12 | 17 | 7 | 15 | 12 | 26 | 2 | 3 | 33 | 19 | 29 | 0 | 11 | 9 | 11 | 7 | 9 | 21 | 4 | 15 | 0 | 40 | 1 | 2 | 8 | 11 | 31 | 12 | 6 | 7 | 3 | 35 | 19 | 8 | 7 | 0 | 9 | 1 | 5 | 0 | 35 | 3 | 9 | 27 | 0 | 10 | 14 | 10 | 0 | 0 | 14 | 4 | 2 | 8 | 1 | 0 | 1 | 2 | 9 | 0 | 0 | 1 |
| NA | NC_078853 | NC_078853.1 | Common oak ringspot-associated virus segment RNA3; viral cRNA for nucleocapsid protein (NC gene); strain A72; isolate E54899. | 541 | 406 | 171 | 220 | 0 | 1338 | 0.4 | 0.3 | 0.13 | 0.16 | 0 | 0.29 | 0.8919 | 0.2679 | 0.7639 | 1.8579 | 1 | 0 | 1 | 339 | 238 | 131 | 168 | 0 | 876 | 0.39 | 0.27 | 0.15 | 0.19 | 0 | 0.34 | 0.875 | 0.2988 | 0.7409 | 1.9077 | 0 | 1 | 0 | 1 | 339 | 238 | 131 | 168 | 0 | 876 | 0.39 | 0.27 | 0.15 | 0.19 | 0 | 0.34 | 0.875 | 0.2988 | 0.7409 | 1.9077 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11 | 10 | 1 | 11 | 11 | 9 | 9 | 10 | 0 | 2 | 16 | 9 | 8 | 0 | 3 | 6 | 3 | 2 | 5 | 9 | 0 | 9 | 2 | 9 | 2 | 4 | 2 | 7 | 9 | 7 | 3 | 5 | 4 | 10 | 9 | 5 | 1 | 0 | 3 | 1 | 5 | 0 | 18 | 1 | 1 | 9 | 0 | 9 | 0 | 3 | 0 | 0 | 2 | 1 | 1 | 3 | 0 | 0 | 0 | 0 | 11 | 1 | 0 | 0 |
| NA | NC_078854 | NC_078854.1 | Common oak ringspot-associated virus segment RNA4; viral cRNA for movement protein (MP gene); strain A72; isolate E54899. | 553 | 415 | 204 | 239 | 0 | 1411 | 0.39 | 0.29 | 0.14 | 0.17 | 0 | 0.31 | 0.8919 | 0.2216 | 0.802 | 1.8862 | 1 | 0 | 1 | 417 | 310 | 161 | 210 | 0 | 1098 | 0.38 | 0.28 | 0.15 | 0.19 | 0 | 0.34 | 0.8925 | 0.2793 | 0.755 | 1.9081 | 0 | 1 | 0 | 1 | 417 | 310 | 161 | 210 | 0 | 1098 | 0.38 | 0.28 | 0.15 | 0.19 | 0 | 0.34 | 0.8925 | 0.2793 | 0.755 | 1.9081 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15 | 13 | 6 | 12 | 10 | 5 | 7 | 14 | 0 | 2 | 15 | 15 | 5 | 1 | 2 | 11 | 6 | 2 | 4 | 7 | 1 | 5 | 0 | 25 | 8 | 1 | 9 | 7 | 11 | 6 | 3 | 8 | 6 | 12 | 9 | 5 | 1 | 0 | 2 | 3 | 7 | 0 | 23 | 1 | 1 | 16 | 0 | 4 | 1 | 8 | 0 | 0 | 6 | 3 | 6 | 5 | 1 | 0 | 1 | 1 | 8 | 0 | 0 | 0 |
| NA | NC_078855 | NC_078855.1 | Common oak ringspot-associated virus segment RNA5; viral cRNA for P21 (p5 gene); strain A72; isolate E54899. | 435 | 323 | 123 | 149 | 0 | 1030 | 0.42 | 0.31 | 0.12 | 0.14 | 0 | 0.26 | 0.8839 | 0.2433 | 0.784 | 1.8195 | 1 | 0 | 1 | 201 | 179 | 64 | 96 | 0 | 540 | 0.37 | 0.33 | 0.12 | 0.18 | 0 | 0.3 | 0.8649 | 0.2579 | 0.7786 | 1.8664 | 0 | 1 | 0 | 1 | 201 | 179 | 64 | 96 | 0 | 540 | 0.37 | 0.33 | 0.12 | 0.18 | 0 | 0.3 | 0.8649 | 0.2579 | 0.7786 | 1.8664 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10 | 6 | 0 | 2 | 4 | 3 | 4 | 2 | 3 | 2 | 12 | 14 | 5 | 0 | 5 | 4 | 7 | 1 | 2 | 8 | 1 | 4 | 2 | 7 | 0 | 0 | 1 | 2 | 8 | 0 | 3 | 4 | 1 | 9 | 4 | 3 | 1 | 0 | 3 | 0 | 0 | 0 | 8 | 0 | 1 | 6 | 0 | 6 | 3 | 2 | 0 | 0 | 4 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 |