| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NA | NC_038574 | NC_038574.1 | Equine encephalosis virus isolate HS103/06 VP1 gene; complete cds. | 1224 | 1054 | 716 | 969 | 0 | 3963 | 0.31 | 0.27 | 0.18 | 0.24 | 0 | 0.43 | 0.9195 | 0.2248 | 0.8 | 1.9745 | 1 | 0 | 1 | 1213 | 1043 | 707 | 961 | 0 | 3924 | 0.31 | 0.27 | 0.18 | 0.24 | 0 | 0.43 | 0.9195 | 0.2276 | 0.7978 | 1.9742 | 0 | 1 | 0 | 1 | 1213 | 1043 | 707 | 961 | 0 | 3924 | 0.31 | 0.27 | 0.18 | 0.24 | 0 | 0.43 | 0.9195 | 0.2276 | 0.7978 | 1.9742 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 46 | 30 | 25 | 19 | 11 | 45 | 21 | 31 | 6 | 9 | 24 | 41 | 30 | 17 | 13 | 29 | 22 | 22 | 25 | 40 | 21 | 19 | 5 | 53 | 21 | 11 | 19 | 26 | 32 | 37 | 16 | 14 | 9 | 39 | 18 | 29 | 10 | 7 | 27 | 9 | 17 | 8 | 46 | 10 | 7 | 28 | 16 | 25 | 10 | 18 | 14 | 21 | 27 | 16 | 28 | 23 | 1 | 5 | 10 | 14 | 21 | 0 | 0 | 15 |
| NA | NC_038582 | NC_038582.1 | Equine encephalosis virus isolate HS103/06 VP2 gene; complete cds. | 948 | 812 | 556 | 862 | 0 | 3178 | 0.3 | 0.26 | 0.17 | 0.27 | 0 | 0.45 | 0.9172 | 0.2931 | 0.7508 | 1.9741 | 1 | 0 | 1 | 939 | 795 | 547 | 848 | 0 | 3129 | 0.3 | 0.25 | 0.17 | 0.27 | 0 | 0.45 | 0.9172 | 0.2988 | 0.7458 | 1.9737 | 0 | 1 | 0 | 1 | 939 | 795 | 547 | 848 | 0 | 3129 | 0.3 | 0.25 | 0.17 | 0.27 | 0 | 0.45 | 0.9172 | 0.2988 | 0.7458 | 1.9737 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 31 | 28 | 29 | 4 | 12 | 39 | 12 | 24 | 4 | 14 | 15 | 29 | 15 | 24 | 13 | 20 | 11 | 24 | 22 | 25 | 13 | 14 | 6 | 46 | 10 | 9 | 16 | 24 | 20 | 19 | 15 | 13 | 13 | 22 | 20 | 26 | 7 | 8 | 19 | 11 | 10 | 4 | 41 | 15 | 5 | 19 | 23 | 24 | 10 | 17 | 16 | 22 | 28 | 6 | 16 | 10 | 1 | 8 | 9 | 8 | 15 | 0 | 0 | 10 |
| NA | NC_038575 | NC_038575.1 | Equine encephalosis virus isolate HS103/06 VP3 gene; complete cds. | 811 | 708 | 576 | 680 | 0 | 2775 | 0.29 | 0.26 | 0.21 | 0.25 | 0 | 0.45 | 0.9281 | 0.1506 | 0.86 | 1.9895 | 1 | 0 | 1 | 797 | 686 | 564 | 662 | 0 | 2709 | 0.29 | 0.25 | 0.21 | 0.24 | 0 | 0.45 | 0.9281 | 0.1548 | 0.8563 | 1.9892 | 0 | 1 | 0 | 1 | 797 | 686 | 564 | 662 | 0 | 2709 | 0.29 | 0.25 | 0.21 | 0.24 | 0 | 0.45 | 0.9281 | 0.1548 | 0.8563 | 1.9892 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 36 | 14 | 20 | 9 | 10 | 34 | 15 | 21 | 12 | 9 | 24 | 22 | 5 | 16 | 4 | 18 | 10 | 17 | 8 | 26 | 11 | 7 | 10 | 34 | 25 | 6 | 12 | 20 | 19 | 14 | 25 | 7 | 4 | 24 | 20 | 22 | 9 | 14 | 18 | 13 | 5 | 9 | 19 | 7 | 1 | 25 | 13 | 25 | 6 | 12 | 9 | 19 | 19 | 10 | 10 | 14 | 1 | 6 | 13 | 9 | 19 | 0 | 0 | 8 |
| NA | NC_038581 | NC_038581.1 | Equine encephalosis virus isolate HS103/06 VP4 gene; complete cds. | 581 | 502 | 358 | 545 | 0 | 1986 | 0.29 | 0.25 | 0.18 | 0.27 | 0 | 0.45 | 0.9229 | 0.28 | 0.7605 | 1.9778 | 1 | 0 | 1 | 572 | 484 | 350 | 535 | 0 | 1941 | 0.29 | 0.25 | 0.18 | 0.28 | 0 | 0.46 | 0.9229 | 0.2924 | 0.7502 | 1.9772 | 0 | 1 | 0 | 1 | 572 | 484 | 350 | 535 | 0 | 1941 | 0.29 | 0.25 | 0.18 | 0.28 | 0 | 0.46 | 0.9229 | 0.2924 | 0.7502 | 1.9772 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15 | 22 | 8 | 6 | 11 | 24 | 5 | 13 | 3 | 21 | 15 | 16 | 13 | 15 | 12 | 8 | 4 | 12 | 13 | 13 | 8 | 9 | 4 | 26 | 7 | 3 | 10 | 19 | 15 | 12 | 12 | 5 | 4 | 17 | 6 | 19 | 11 | 5 | 7 | 6 | 9 | 6 | 18 | 3 | 2 | 12 | 12 | 16 | 9 | 9 | 3 | 13 | 17 | 3 | 10 | 10 | 1 | 7 | 11 | 6 | 7 | 0 | 0 | 9 |
| NA | NC_038576 | NC_038576.1 | Equine encephalosis virus isolate HS103/06 NS1 gene; complete cds. | 478 | 472 | 335 | 464 | 0 | 1749 | 0.27 | 0.27 | 0.19 | 0.27 | 0 | 0.46 | 0.9231 | 0.1678 | 0.8547 | 1.986 | 1 | 0 | 1 | 448 | 444 | 315 | 440 | 0 | 1647 | 0.27 | 0.27 | 0.19 | 0.27 | 0 | 0.46 | 0.9253 | 0.17 | 0.8535 | 1.9859 | 0 | 1 | 0 | 1 | 448 | 444 | 315 | 440 | 0 | 1647 | 0.27 | 0.27 | 0.19 | 0.27 | 0 | 0.46 | 0.9253 | 0.17 | 0.8535 | 1.9859 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18 | 7 | 8 | 10 | 6 | 18 | 15 | 12 | 0 | 6 | 15 | 14 | 5 | 6 | 5 | 10 | 5 | 12 | 11 | 14 | 8 | 8 | 2 | 25 | 11 | 1 | 6 | 7 | 9 | 12 | 11 | 11 | 10 | 13 | 9 | 10 | 12 | 0 | 9 | 5 | 4 | 10 | 6 | 3 | 11 | 17 | 11 | 19 | 9 | 11 | 8 | 10 | 7 | 5 | 10 | 8 | 0 | 1 | 6 | 4 | 8 | 1 | 0 | 4 |
| NA | NC_038577 | NC_038577.1 | Equine encephalosis virus isolate HS103/06 VP5 gene; complete cds. | 503 | 357 | 275 | 471 | 0 | 1606 | 0.31 | 0.22 | 0.17 | 0.29 | 0 | 0.46 | 0.8284 | 0.4325 | 0.6468 | 1.9618 | 1 | 0 | 1 | 484 | 341 | 263 | 459 | 0 | 1547 | 0.31 | 0.22 | 0.17 | 0.3 | 0 | 0.47 | 0.8253 | 0.4448 | 0.6388 | 1.9601 | 0 | 1 | 0 | 1 | 484 | 341 | 263 | 459 | 0 | 1547 | 0.31 | 0.22 | 0.17 | 0.3 | 0 | 0.47 | 0.8253 | 0.4448 | 0.6388 | 1.9601 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 23 | 16 | 5 | 4 | 13 | 28 | 3 | 15 | 2 | 2 | 12 | 21 | 9 | 3 | 11 | 4 | 1 | 11 | 7 | 6 | 8 | 5 | 0 | 22 | 11 | 4 | 7 | 8 | 6 | 14 | 8 | 1 | 7 | 20 | 5 | 7 | 8 | 4 | 4 | 2 | 7 | 3 | 17 | 6 | 0 | 14 | 13 | 8 | 0 | 12 | 5 | 28 | 12 | 4 | 4 | 4 | 1 | 4 | 7 | 8 | 8 | 0 | 0 | 3 |
| NA | NC_038578 | NC_038578.1 | Equine encephalosis virus isolate HS103/06 VP7 gene; complete cds. | 308 | 296 | 260 | 311 | 0 | 1175 | 0.26 | 0.25 | 0.22 | 0.26 | 0 | 0.49 | 0.9281 | 0.1092 | 0.8985 | 1.9965 | 1 | 0 | 1 | 273 | 261 | 236 | 283 | 0 | 1053 | 0.26 | 0.25 | 0.22 | 0.27 | 0 | 0.49 | 0.9283 | 0.113 | 0.895 | 1.9967 | 0 | 1 | 0 | 1 | 273 | 261 | 236 | 283 | 0 | 1053 | 0.26 | 0.25 | 0.22 | 0.27 | 0 | 0.49 | 0.9283 | 0.113 | 0.895 | 1.9967 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 16 | 0 | 7 | 4 | 9 | 8 | 13 | 9 | 2 | 4 | 7 | 6 | 5 | 11 | 5 | 10 | 2 | 8 | 3 | 6 | 3 | 6 | 3 | 10 | 13 | 3 | 2 | 10 | 7 | 9 | 2 | 6 | 3 | 6 | 8 | 2 | 4 | 2 | 8 | 6 | 1 | 2 | 2 | 3 | 2 | 14 | 3 | 8 | 2 | 1 | 2 | 14 | 6 | 4 | 6 | 13 | 0 | 0 | 10 | 1 | 6 | 1 | 0 | 2 |
| NA | NC_038583 | NC_038583.1 | Equine encephalosis virus isolate HS103/06 NS2 gene; complete cds. | 359 | 281 | 233 | 308 | 0 | 1181 | 0.3 | 0.24 | 0.2 | 0.26 | 0 | 0.46 | 0.9226 | 0.2605 | 0.7696 | 1.9827 | 1 | 0 | 1 | 328 | 258 | 218 | 285 | 0 | 1089 | 0.3 | 0.24 | 0.2 | 0.26 | 0 | 0.46 | 0.9238 | 0.2527 | 0.7757 | 1.9843 | 0 | 1 | 0 | 1 | 328 | 258 | 218 | 285 | 0 | 1089 | 0.3 | 0.24 | 0.2 | 0.26 | 0 | 0.46 | 0.9238 | 0.2527 | 0.7757 | 1.9843 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 12 | 7 | 7 | 6 | 7 | 16 | 5 | 6 | 5 | 2 | 9 | 9 | 9 | 6 | 6 | 9 | 5 | 7 | 4 | 9 | 4 | 7 | 2 | 12 | 7 | 5 | 3 | 7 | 6 | 9 | 4 | 5 | 7 | 7 | 8 | 9 | 0 | 3 | 3 | 2 | 3 | 3 | 12 | 5 | 3 | 6 | 4 | 12 | 3 | 2 | 6 | 7 | 6 | 5 | 6 | 8 | 0 | 1 | 7 | 1 | 4 | 1 | 0 | 2 |
| NA | NC_038579 | NC_038579.1 | Equine encephalosis virus isolate HS103/06 VP6 gene; complete cds. | 358 | 204 | 162 | 356 | 0 | 1080 | 0.33 | 0.19 | 0.15 | 0.33 | 0 | 0.48 | 0.9071 | 0.6485 | 0.5124 | 1.9205 | 1 | 0 | 1 | 341 | 187 | 154 | 344 | 0 | 1026 | 0.33 | 0.18 | 0.15 | 0.34 | 0 | 0.49 | 0.9071 | 0.6732 | 0.498 | 1.9151 | 0 | 1 | 0 | 1 | 341 | 187 | 154 | 344 | 0 | 1026 | 0.33 | 0.18 | 0.15 | 0.34 | 0 | 0.49 | 0.9071 | 0.6732 | 0.498 | 1.9151 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5 | 20 | 3 | 6 | 11 | 14 | 8 | 6 | 1 | 2 | 6 | 18 | 10 | 4 | 3 | 3 | 1 | 7 | 2 | 1 | 2 | 9 | 3 | 19 | 7 | 1 | 5 | 7 | 4 | 31 | 6 | 1 | 2 | 4 | 7 | 5 | 1 | 0 | 3 | 1 | 3 | 3 | 12 | 6 | 0 | 8 | 12 | 3 | 1 | 3 | 3 | 4 | 5 | 1 | 5 | 4 | 1 | 1 | 3 | 2 | 5 | 0 | 0 | 8 |
| NA | NC_038580 | NC_038580.1 | Equine encephalosis virus isolate HS103/06 NS3 gene; complete cds. | 226 | 182 | 144 | 207 | 0 | 759 | 0.3 | 0.24 | 0.19 | 0.27 | 0 | 0.46 | 0.9175 | 0.2873 | 0.7505 | 1.9806 | 1 | 0 | 1 | 220 | 172 | 135 | 196 | 0 | 723 | 0.3 | 0.24 | 0.19 | 0.27 | 0 | 0.46 | 0.9141 | 0.3067 | 0.7353 | 1.9777 | 0 | 1 | 0 | 1 | 220 | 172 | 135 | 196 | 0 | 723 | 0.3 | 0.24 | 0.19 | 0.27 | 0 | 0.46 | 0.9141 | 0.3067 | 0.7353 | 1.9777 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 14 | 6 | 3 | 5 | 4 | 8 | 5 | 5 | 0 | 3 | 8 | 4 | 4 | 9 | 3 | 4 | 0 | 8 | 5 | 2 | 2 | 2 | 0 | 10 | 4 | 4 | 3 | 7 | 4 | 3 | 2 | 3 | 0 | 7 | 5 | 5 | 1 | 0 | 4 | 5 | 3 | 2 | 8 | 1 | 1 | 5 | 4 | 5 | 4 | 0 | 3 | 6 | 4 | 1 | 3 | 7 | 1 | 1 | 5 | 3 | 2 | 0 | 0 | 1 |