| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NA | NC_034168 | NC_034168.1 | Fall chinook aquareovirus isolate GSH1 segment 1; complete sequence. | 843 | 962 | 1303 | 839 | 0 | 3947 | 0.21 | 0.24 | 0.33 | 0.21 | 0 | 0.54 | 0.9187 | 0.2825 | 0.7601 | 1.9748 | 1 | 0 | 1 | 832 | 947 | 1284 | 825 | 0 | 3888 | 0.21 | 0.24 | 0.33 | 0.21 | 0 | 0.54 | 0.9175 | 0.2823 | 0.7605 | 1.9747 | 0 | 1 | 0 | 1 | 832 | 947 | 1284 | 825 | 0 | 3888 | 0.21 | 0.24 | 0.33 | 0.21 | 0 | 0.54 | 0.9175 | 0.2823 | 0.7605 | 1.9747 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 29 | 11 | 8 | 28 | 18 | 16 | 37 | 24 | 23 | 12 | 21 | 14 | 30 | 20 | 8 | 34 | 7 | 21 | 51 | 8 | 28 | 30 | 36 | 32 | 31 | 44 | 17 | 24 | 17 | 15 | 39 | 22 | 44 | 9 | 21 | 35 | 15 | 42 | 33 | 48 | 5 | 17 | 3 | 28 | 7 | 26 | 2 | 10 | 4 | 10 | 13 | 19 | 5 | 25 | 3 | 32 | 1 | 7 | 17 | 22 | 30 | 0 | 0 | 8 |
| NA | NC_034169 | NC_034169.1 | Fall chinook aquareovirus isolate GSH1 segment 2; complete sequence. | 849 | 958 | 1188 | 874 | 0 | 3869 | 0.22 | 0.25 | 0.31 | 0.23 | 0 | 0.53 | 0.9243 | 0.2126 | 0.811 | 1.9867 | 1 | 0 | 1 | 843 | 943 | 1179 | 863 | 0 | 3828 | 0.22 | 0.25 | 0.31 | 0.23 | 0 | 0.53 | 0.9243 | 0.2107 | 0.813 | 1.9865 | 0 | 1 | 0 | 1 | 843 | 943 | 1179 | 863 | 0 | 3828 | 0.22 | 0.25 | 0.31 | 0.23 | 0 | 0.53 | 0.9243 | 0.2107 | 0.813 | 1.9865 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 38 | 21 | 10 | 21 | 21 | 20 | 28 | 22 | 31 | 30 | 18 | 20 | 38 | 7 | 8 | 25 | 12 | 20 | 30 | 15 | 24 | 35 | 32 | 36 | 26 | 35 | 14 | 14 | 18 | 16 | 34 | 23 | 34 | 9 | 12 | 39 | 26 | 40 | 26 | 47 | 10 | 29 | 19 | 23 | 3 | 30 | 3 | 4 | 9 | 10 | 13 | 15 | 9 | 21 | 4 | 23 | 0 | 4 | 8 | 30 | 23 | 0 | 1 | 10 |
| NA | NC_034170 | NC_034170.1 | Fall chinook aquareovirus isolate GSH1 segment 3; complete sequence. | 833 | 823 | 1226 | 820 | 0 | 3702 | 0.23 | 0.22 | 0.33 | 0.22 | 0 | 0.55 | 0.9137 | 0.2045 | 0.8284 | 1.9762 | 1 | 0 | 1 | 820 | 802 | 1208 | 803 | 0 | 3633 | 0.23 | 0.22 | 0.33 | 0.22 | 0 | 0.55 | 0.916 | 0.2125 | 0.8214 | 1.9754 | 0 | 1 | 0 | 1 | 820 | 802 | 1208 | 803 | 0 | 3633 | 0.23 | 0.22 | 0.33 | 0.22 | 0 | 0.55 | 0.916 | 0.2125 | 0.8214 | 1.9754 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 43 | 10 | 11 | 24 | 23 | 17 | 40 | 20 | 21 | 18 | 24 | 19 | 27 | 13 | 8 | 33 | 6 | 25 | 34 | 5 | 26 | 22 | 33 | 28 | 30 | 42 | 12 | 10 | 8 | 19 | 57 | 18 | 38 | 3 | 21 | 29 | 20 | 41 | 20 | 55 | 10 | 25 | 7 | 26 | 8 | 21 | 2 | 8 | 3 | 9 | 7 | 15 | 5 | 21 | 7 | 33 | 0 | 3 | 9 | 11 | 19 | 1 | 0 | 8 |
| NA | NC_034171 | NC_034171.1 | Fall chinook aquareovirus isolate GSH1 segment 4; complete sequence. | 448 | 604 | 709 | 473 | 0 | 2234 | 0.2 | 0.27 | 0.32 | 0.21 | 0 | 0.53 | 0.92 | 0.348 | 0.7044 | 1.9747 | 1 | 0 | 1 | 438 | 585 | 691 | 455 | 0 | 2169 | 0.2 | 0.27 | 0.32 | 0.21 | 0 | 0.53 | 0.9185 | 0.3496 | 0.7036 | 1.9744 | 0 | 1 | 0 | 1 | 438 | 585 | 691 | 455 | 0 | 2169 | 0.2 | 0.27 | 0.32 | 0.21 | 0 | 0.53 | 0.9185 | 0.3496 | 0.7036 | 1.9744 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 8 | 14 | 6 | 12 | 8 | 12 | 18 | 10 | 22 | 15 | 6 | 9 | 13 | 13 | 5 | 17 | 9 | 12 | 22 | 8 | 15 | 13 | 16 | 20 | 6 | 18 | 20 | 14 | 11 | 4 | 29 | 17 | 17 | 3 | 5 | 21 | 16 | 21 | 9 | 20 | 4 | 8 | 9 | 13 | 2 | 13 | 1 | 2 | 8 | 9 | 20 | 11 | 11 | 22 | 1 | 9 | 0 | 3 | 11 | 18 | 9 | 1 | 0 | 4 |
| NA | NC_034172 | NC_034172.1 | Fall chinook aquareovirus isolate GSH1 segment 5; complete sequence. | 466 | 484 | 610 | 493 | 0 | 2053 | 0.23 | 0.24 | 0.3 | 0.24 | 0 | 0.54 | 0.9209 | 0.125 | 0.8855 | 1.9915 | 1 | 0 | 1 | 451 | 459 | 579 | 470 | 0 | 1959 | 0.23 | 0.23 | 0.3 | 0.24 | 0 | 0.54 | 0.92 | 0.1127 | 0.8972 | 1.9922 | 0 | 1 | 0 | 1 | 451 | 459 | 579 | 470 | 0 | 1959 | 0.23 | 0.23 | 0.3 | 0.24 | 0 | 0.54 | 0.92 | 0.1127 | 0.8972 | 1.9922 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 20 | 18 | 4 | 13 | 12 | 15 | 18 | 10 | 15 | 6 | 11 | 10 | 16 | 7 | 7 | 23 | 11 | 14 | 16 | 3 | 16 | 19 | 15 | 18 | 8 | 21 | 5 | 9 | 7 | 11 | 24 | 13 | 25 | 1 | 5 | 19 | 5 | 11 | 11 | 33 | 13 | 6 | 8 | 10 | 1 | 16 | 2 | 4 | 2 | 2 | 6 | 10 | 1 | 9 | 3 | 13 | 0 | 2 | 7 | 3 | 7 | 1 | 0 | 2 |
| NA | NC_034173 | NC_034173.1 | Fall chinook aquareovirus isolate GSH1 segment 6; complete sequence. | 429 | 435 | 663 | 405 | 0 | 1932 | 0.22 | 0.23 | 0.34 | 0.21 | 0 | 0.55 | 0.918 | 0.2485 | 0.7985 | 1.9684 | 1 | 0 | 1 | 394 | 385 | 608 | 368 | 0 | 1755 | 0.22 | 0.22 | 0.35 | 0.21 | 0 | 0.56 | 0.9165 | 0.2575 | 0.7912 | 1.9663 | 0 | 1 | 0 | 1 | 394 | 385 | 608 | 368 | 0 | 1755 | 0.22 | 0.22 | 0.35 | 0.21 | 0 | 0.56 | 0.9165 | 0.2575 | 0.7912 | 1.9663 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17 | 11 | 4 | 17 | 12 | 16 | 12 | 7 | 26 | 4 | 4 | 11 | 14 | 3 | 2 | 27 | 9 | 7 | 12 | 4 | 29 | 13 | 15 | 7 | 15 | 23 | 2 | 6 | 4 | 6 | 18 | 8 | 17 | 5 | 4 | 19 | 15 | 16 | 6 | 32 | 4 | 10 | 4 | 6 | 6 | 7 | 1 | 3 | 2 | 6 | 5 | 4 | 2 | 11 | 0 | 3 | 0 | 0 | 4 | 11 | 12 | 1 | 0 | 4 |
| NA | NC_034162 | NC_034162.1 | Fall chinook aquareovirus isolate GSH1 segment 7; complete sequence. | 283 | 352 | 428 | 334 | 0 | 1397 | 0.2 | 0.25 | 0.31 | 0.24 | 0 | 0.55 | 0.9229 | 0.232 | 0.7922 | 1.9841 | 2 | 0 | 2 | 301 | 347 | 442 | 338 | 0 | 1428 | 0.21 | 0.24 | 0.31 | 0.24 | 0 | 0.54 | 0.8943 | 0.2009 | 0.8193 | 1.9845 | 116 | 2 | 0 | 2 | 301 | 347 | 442 | 338 | 0 | 1428 | 0.21 | 0.24 | 0.31 | 0.24 | 0 | 0.54 | 0.8943 | 0.2009 | 0.8193 | 1.9845 | 116 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 9 | 4 | 2 | 11 | 6 | 10 | 13 | 6 | 9 | 13 | 3 | 11 | 12 | 2 | 7 | 5 | 10 | 10 | 14 | 0 | 17 | 8 | 10 | 11 | 12 | 13 | 4 | 4 | 6 | 8 | 11 | 11 | 6 | 2 | 6 | 19 | 10 | 13 | 9 | 11 | 5 | 5 | 2 | 7 | 9 | 4 | 2 | 5 | 12 | 12 | 8 | 2 | 1 | 8 | 3 | 14 | 1 | 5 | 5 | 5 | 6 | 0 | 1 | 6 |
| NA | NC_034163 | NC_034163.1 | Fall chinook aquareovirus isolate GSH1 segment 8; complete sequence. | 267 | 327 | 437 | 294 | 0 | 1325 | 0.2 | 0.25 | 0.33 | 0.22 | 0 | 0.55 | 0.9147 | 0.2966 | 0.7446 | 1.9736 | 1 | 0 | 1 | 254 | 308 | 421 | 274 | 0 | 1257 | 0.2 | 0.25 | 0.33 | 0.22 | 0 | 0.55 | 0.915 | 0.3076 | 0.7378 | 1.9709 | 0 | 1 | 0 | 1 | 254 | 308 | 421 | 274 | 0 | 1257 | 0.2 | 0.25 | 0.33 | 0.22 | 0 | 0.55 | 0.915 | 0.3076 | 0.7378 | 1.9709 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 14 | 1 | 4 | 10 | 9 | 2 | 25 | 5 | 9 | 9 | 13 | 4 | 10 | 4 | 1 | 11 | 1 | 3 | 11 | 4 | 2 | 3 | 17 | 9 | 14 | 10 | 7 | 4 | 3 | 7 | 14 | 9 | 7 | 0 | 1 | 7 | 5 | 12 | 12 | 19 | 2 | 6 | 0 | 14 | 2 | 11 | 1 | 3 | 3 | 7 | 3 | 10 | 3 | 5 | 1 | 11 | 0 | 1 | 5 | 9 | 6 | 1 | 0 | 3 |
| NA | NC_034164 | NC_034164.1 | Fall chinook aquareovirus isolate GSH1 segment 9; complete sequence. | 254 | 260 | 365 | 262 | 0 | 1141 | 0.22 | 0.23 | 0.32 | 0.23 | 0 | 0.55 | 0.9177 | 0.1759 | 0.8474 | 1.9821 | 1 | 0 | 1 | 239 | 236 | 343 | 253 | 0 | 1071 | 0.22 | 0.22 | 0.32 | 0.24 | 0 | 0.56 | 0.916 | 0.1573 | 0.8625 | 1.9816 | 0 | 1 | 0 | 1 | 239 | 236 | 343 | 253 | 0 | 1071 | 0.22 | 0.22 | 0.32 | 0.24 | 0 | 0.56 | 0.916 | 0.1573 | 0.8625 | 1.9816 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17 | 8 | 3 | 6 | 6 | 3 | 11 | 4 | 7 | 4 | 7 | 8 | 5 | 3 | 1 | 8 | 7 | 8 | 10 | 1 | 16 | 8 | 10 | 6 | 8 | 11 | 0 | 2 | 2 | 5 | 17 | 3 | 7 | 1 | 3 | 15 | 6 | 11 | 6 | 20 | 3 | 6 | 5 | 6 | 1 | 5 | 2 | 1 | 3 | 2 | 5 | 2 | 0 | 7 | 5 | 5 | 1 | 0 | 2 | 5 | 5 | 0 | 0 | 2 |
| NA | NC_034165 | NC_034165.1 | Fall chinook aquareovirus isolate GSH1 segment 10; complete sequence. | 230 | 228 | 269 | 252 | 0 | 979 | 0.23 | 0.23 | 0.27 | 0.26 | 0 | 0.53 | 0.9095 | 0.037 | 0.9641 | 1.9966 | 1 | 0 | 1 | 212 | 207 | 249 | 235 | 0 | 903 | 0.23 | 0.23 | 0.28 | 0.26 | 0 | 0.54 | 0.9083 | 0.0409 | 0.9601 | 1.9959 | 0 | 1 | 0 | 1 | 212 | 207 | 249 | 235 | 0 | 903 | 0.23 | 0.23 | 0.28 | 0.26 | 0 | 0.54 | 0.9083 | 0.0409 | 0.9601 | 1.9959 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 13 | 7 | 2 | 9 | 6 | 9 | 6 | 7 | 5 | 1 | 5 | 6 | 5 | 2 | 2 | 9 | 5 | 9 | 3 | 1 | 8 | 9 | 6 | 10 | 8 | 6 | 1 | 4 | 0 | 6 | 5 | 5 | 8 | 0 | 4 | 5 | 4 | 6 | 5 | 14 | 3 | 3 | 5 | 2 | 9 | 5 | 2 | 1 | 1 | 5 | 4 | 4 | 2 | 4 | 2 | 3 | 1 | 1 | 1 | 8 | 3 | 0 | 0 | 6 |
| NA | NC_034166 | NC_034166.1 | Fall chinook aquareovirus isolate GSH1 segment 11; complete sequence. | 157 | 176 | 230 | 165 | 0 | 728 | 0.22 | 0.24 | 0.32 | 0.23 | 0 | 0.54 | 0.9208 | 0.2216 | 0.8047 | 1.983 | 1 | 0 | 1 | 141 | 155 | 211 | 144 | 0 | 651 | 0.22 | 0.24 | 0.32 | 0.22 | 0 | 0.55 | 0.9141 | 0.236 | 0.7961 | 1.9792 | 0 | 1 | 0 | 1 | 141 | 155 | 211 | 144 | 0 | 651 | 0.22 | 0.24 | 0.32 | 0.22 | 0 | 0.55 | 0.9141 | 0.236 | 0.7961 | 1.9792 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 3 | 3 | 2 | 7 | 5 | 4 | 4 | 2 | 10 | 3 | 3 | 1 | 4 | 1 | 3 | 3 | 3 | 6 | 8 | 1 | 6 | 2 | 4 | 5 | 1 | 9 | 3 | 0 | 3 | 5 | 5 | 4 | 9 | 1 | 1 | 9 | 4 | 5 | 4 | 6 | 2 | 3 | 4 | 8 | 1 | 4 | 1 | 2 | 1 | 5 | 4 | 0 | 0 | 2 | 1 | 6 | 1 | 0 | 1 | 5 | 3 | 0 | 0 | 1 |