Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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NA | NC_078679 | NC_078679.1 | Maple mottle-associated virus strain MaMaV/Acer segment RNA1; complete sequence. | 2855 | 2267 | 919 | 1033 | 0 | 7074 | 0.4 | 0.32 | 0.13 | 0.15 | 0 | 0.28 | 0.8946 | 0.1732 | 0.8418 | 1.8423 | 1 | 0 | 1 | 2795 | 2203 | 901 | 1019 | 0 | 6918 | 0.4 | 0.32 | 0.13 | 0.15 | 0 | 0.28 | 0.8943 | 0.1799 | 0.8362 | 1.844 | 0 | 1 | 0 | 1 | 2795 | 2203 | 901 | 1019 | 0 | 6918 | 0.4 | 0.32 | 0.13 | 0.15 | 0 | 0.28 | 0.8943 | 0.1799 | 0.8362 | 1.844 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 54 | 54 | 26 | 44 | 40 | 26 | 29 | 80 | 7 | 7 | 141 | 92 | 72 | 1 | 44 | 34 | 38 | 12 | 28 | 65 | 9 | 35 | 5 | 148 | 11 | 11 | 31 | 39 | 122 | 19 | 26 | 37 | 11 | 131 | 84 | 26 | 11 | 1 | 30 | 6 | 15 | 1 | 151 | 5 | 6 | 57 | 4 | 63 | 28 | 48 | 1 | 1 | 106 | 19 | 15 | 53 | 0 | 0 | 0 | 1 | 40 | 0 | 1 | 4 |
NA | NC_078676 | NC_078676.1 | Maple mottle-associated virus strain MaMaV/Acer segment RNA2; complete sequence. | 848 | 787 | 301 | 353 | 0 | 2289 | 0.37 | 0.34 | 0.13 | 0.15 | 0 | 0.29 | 0.8889 | 0.1168 | 0.8904 | 1.8611 | 1 | 0 | 1 | 737 | 660 | 239 | 305 | 0 | 1941 | 0.38 | 0.34 | 0.12 | 0.16 | 0 | 0.28 | 0.8883 | 0.1764 | 0.8396 | 1.8513 | 0 | 1 | 0 | 1 | 737 | 660 | 239 | 305 | 0 | 1941 | 0.38 | 0.34 | 0.12 | 0.16 | 0 | 0.28 | 0.8883 | 0.1764 | 0.8396 | 1.8513 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 12 | 17 | 12 | 17 | 7 | 5 | 5 | 28 | 4 | 4 | 37 | 24 | 14 | 1 | 15 | 6 | 10 | 9 | 7 | 21 | 8 | 15 | 1 | 35 | 0 | 2 | 5 | 12 | 38 | 5 | 6 | 4 | 5 | 39 | 24 | 7 | 4 | 2 | 3 | 0 | 3 | 0 | 41 | 2 | 4 | 15 | 2 | 10 | 20 | 14 | 1 | 0 | 27 | 7 | 1 | 15 | 0 | 0 | 0 | 2 | 10 | 1 | 0 | 2 |
NA | NC_078678 | NC_078678.1 | Maple mottle-associated virus strain MaMaV/Acer segment RNA3; complete sequence. | 655 | 444 | 187 | 239 | 0 | 1525 | 0.43 | 0.29 | 0.12 | 0.16 | 0 | 0.28 | 0.8937 | 0.3141 | 0.7301 | 1.8323 | 1 | 0 | 1 | 326 | 262 | 134 | 181 | 0 | 903 | 0.36 | 0.29 | 0.15 | 0.2 | 0 | 0.35 | 0.8899 | 0.258 | 0.772 | 1.9218 | 0 | 1 | 0 | 1 | 326 | 262 | 134 | 181 | 0 | 903 | 0.36 | 0.29 | 0.15 | 0.2 | 0 | 0.35 | 0.8899 | 0.258 | 0.772 | 1.9218 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 14 | 11 | 7 | 11 | 9 | 5 | 13 | 4 | 0 | 2 | 11 | 10 | 7 | 0 | 3 | 5 | 5 | 3 | 7 | 7 | 2 | 1 | 0 | 15 | 0 | 0 | 2 | 5 | 11 | 8 | 3 | 6 | 1 | 9 | 12 | 5 | 2 | 0 | 3 | 0 | 4 | 2 | 15 | 3 | 1 | 17 | 0 | 11 | 2 | 1 | 0 | 0 | 6 | 5 | 2 | 4 | 1 | 0 | 0 | 0 | 8 | 0 | 0 | 0 |
NA | NC_078675 | NC_078675.1 | Maple mottle-associated virus strain MaMaV/Acer segment RNA4; complete sequence. | 626 | 440 | 209 | 258 | 0 | 1533 | 0.41 | 0.29 | 0.14 | 0.17 | 0 | 0.3 | 0.8977 | 0.2794 | 0.7565 | 1.8691 | 1 | 0 | 1 | 389 | 323 | 159 | 221 | 0 | 1092 | 0.36 | 0.3 | 0.15 | 0.2 | 0 | 0.35 | 0.898 | 0.2559 | 0.7749 | 1.9215 | 0 | 1 | 0 | 1 | 389 | 323 | 159 | 221 | 0 | 1092 | 0.36 | 0.3 | 0.15 | 0.2 | 0 | 0.35 | 0.898 | 0.2559 | 0.7749 | 1.9215 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 16 | 11 | 4 | 10 | 12 | 15 | 11 | 12 | 2 | 5 | 15 | 10 | 9 | 1 | 3 | 7 | 10 | 1 | 5 | 12 | 2 | 8 | 4 | 26 | 3 | 1 | 4 | 6 | 8 | 4 | 4 | 8 | 4 | 10 | 12 | 2 | 1 | 1 | 1 | 1 | 5 | 0 | 24 | 2 | 1 | 10 | 1 | 4 | 1 | 1 | 0 | 0 | 11 | 3 | 7 | 6 | 1 | 0 | 0 | 0 | 6 | 0 | 0 | 0 |
NA | NC_078677 | NC_078677.1 | Maple mottle-associated virus strain MaMaV/Acer segment RNA5; complete sequence. | 733 | 592 | 223 | 277 | 0 | 1825 | 0.4 | 0.32 | 0.12 | 0.15 | 0 | 0.27 | 0.8898 | 0.2144 | 0.8063 | 1.8389 | 1 | 0 | 1 | 586 | 436 | 173 | 239 | 0 | 1434 | 0.41 | 0.3 | 0.12 | 0.17 | 0 | 0.29 | 0.8892 | 0.307 | 0.7339 | 1.8488 | 0 | 1 | 0 | 1 | 586 | 436 | 173 | 239 | 0 | 1434 | 0.41 | 0.3 | 0.12 | 0.17 | 0 | 0.29 | 0.8892 | 0.307 | 0.7339 | 1.8488 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 19 | 16 | 5 | 13 | 6 | 7 | 8 | 17 | 1 | 2 | 21 | 36 | 13 | 0 | 8 | 11 | 8 | 3 | 6 | 11 | 1 | 6 | 0 | 21 | 2 | 1 | 4 | 5 | 30 | 5 | 3 | 6 | 5 | 23 | 10 | 3 | 1 | 0 | 6 | 2 | 7 | 0 | 33 | 2 | 3 | 18 | 0 | 11 | 3 | 9 | 0 | 0 | 19 | 4 | 5 | 11 | 0 | 0 | 0 | 0 | 7 | 1 | 0 | 0 |
NA | NC_078680 | NC_078680.1 | Maple mottle-associated virus strain MaMaV/Acer segment RNA6; complete sequence. | 476 | 389 | 145 | 169 | 0 | 1179 | 0.4 | 0.33 | 0.12 | 0.14 | 0 | 0.27 | 0.8836 | 0.177 | 0.8376 | 1.8297 | 1 | 0 | 1 | 258 | 225 | 98 | 115 | 0 | 696 | 0.37 | 0.32 | 0.14 | 0.17 | 0 | 0.31 | 0.8603 | 0.1481 | 0.8621 | 1.8848 | 0 | 1 | 0 | 1 | 258 | 225 | 98 | 115 | 0 | 696 | 0.37 | 0.32 | 0.14 | 0.17 | 0 | 0.31 | 0.8603 | 0.1481 | 0.8621 | 1.8848 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 8 | 6 | 3 | 13 | 3 | 5 | 4 | 10 | 0 | 0 | 7 | 12 | 5 | 0 | 3 | 0 | 7 | 1 | 4 | 6 | 2 | 1 | 0 | 14 | 4 | 0 | 3 | 2 | 11 | 6 | 6 | 3 | 1 | 11 | 5 | 1 | 2 | 0 | 4 | 1 | 1 | 0 | 8 | 1 | 0 | 7 | 0 | 8 | 0 | 4 | 2 | 0 | 11 | 3 | 2 | 3 | 0 | 0 | 0 | 1 | 6 | 1 | 0 | 0 |