Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
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NA | NC_040730 | NC_040730.1 | Oz virus viral cRNA; segment 1; complete sequence; strain: EH8. | 820 | 549 | 515 | 522 | 0 | 2406 | 0.34 | 0.23 | 0.21 | 0.22 | 0 | 0.43 | 0.9087 | 0.2047 | 0.8281 | 1.97 | 1 | 0 | 1 | 784 | 512 | 494 | 499 | 0 | 2289 | 0.34 | 0.22 | 0.22 | 0.22 | 0 | 0.43 | 0.9098 | 0.2149 | 0.8215 | 1.9692 | 0 | 1 | 0 | 1 | 784 | 512 | 494 | 499 | 0 | 2289 | 0.34 | 0.22 | 0.22 | 0.22 | 0 | 0.43 | 0.9098 | 0.2149 | 0.8215 | 1.9692 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 19 | 32 | 14 | 18 | 21 | 21 | 5 | 14 | 8 | 12 | 11 | 29 | 11 | 3 | 8 | 18 | 10 | 23 | 13 | 10 | 14 | 7 | 8 | 14 | 9 | 15 | 19 | 10 | 10 | 12 | 22 | 8 | 7 | 19 | 23 | 22 | 8 | 7 | 19 | 7 | 15 | 1 | 29 | 4 | 6 | 12 | 10 | 25 | 7 | 14 | 4 | 2 | 8 | 13 | 7 | 21 | 1 | 2 | 0 | 2 | 18 | 0 | 0 | 2 |
NA | NC_040731 | NC_040731.1 | Oz virus viral cRNA; segment 2; complete sequence; strain: EH8. | 732 | 527 | 454 | 512 | 0 | 2225 | 0.33 | 0.24 | 0.2 | 0.23 | 0 | 0.43 | 0.9192 | 0.2229 | 0.8033 | 1.9755 | 1 | 0 | 1 | 708 | 503 | 439 | 498 | 0 | 2148 | 0.33 | 0.23 | 0.2 | 0.23 | 0 | 0.44 | 0.92 | 0.2322 | 0.796 | 1.9753 | 0 | 1 | 0 | 1 | 708 | 503 | 439 | 498 | 0 | 2148 | 0.33 | 0.23 | 0.2 | 0.23 | 0 | 0.44 | 0.92 | 0.2322 | 0.796 | 1.9753 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 23 | 22 | 8 | 20 | 19 | 26 | 9 | 9 | 3 | 6 | 15 | 36 | 5 | 1 | 18 | 21 | 12 | 14 | 19 | 12 | 17 | 9 | 12 | 16 | 2 | 12 | 13 | 17 | 11 | 17 | 15 | 11 | 7 | 14 | 15 | 14 | 6 | 7 | 12 | 8 | 9 | 2 | 29 | 5 | 4 | 12 | 11 | 16 | 6 | 7 | 1 | 3 | 6 | 10 | 12 | 21 | 0 | 3 | 1 | 2 | 17 | 1 | 0 | 5 |
NA | NC_040732 | NC_040732.1 | Oz virus viral cRNA; segment 3; complete sequence; strain: EH8. | 661 | 465 | 433 | 416 | 0 | 1975 | 0.33 | 0.24 | 0.22 | 0.21 | 0 | 0.43 | 0.92 | 0.1941 | 0.8321 | 1.9731 | 1 | 0 | 1 | 638 | 449 | 421 | 406 | 0 | 1914 | 0.33 | 0.23 | 0.22 | 0.21 | 0 | 0.43 | 0.9192 | 0.192 | 0.8341 | 1.9741 | 0 | 1 | 0 | 1 | 638 | 449 | 421 | 406 | 0 | 1914 | 0.33 | 0.23 | 0.22 | 0.21 | 0 | 0.43 | 0.9192 | 0.192 | 0.8341 | 1.9741 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15 | 19 | 13 | 18 | 7 | 18 | 7 | 16 | 11 | 16 | 13 | 36 | 7 | 2 | 11 | 16 | 12 | 10 | 13 | 11 | 9 | 4 | 5 | 7 | 13 | 10 | 21 | 9 | 11 | 6 | 16 | 7 | 8 | 18 | 9 | 26 | 7 | 10 | 8 | 6 | 7 | 2 | 29 | 3 | 7 | 8 | 10 | 8 | 4 | 10 | 2 | 1 | 3 | 11 | 10 | 15 | 0 | 2 | 2 | 2 | 15 | 0 | 1 | 5 |
NA | NC_040735 | NC_040735.1 | Oz virus viral cRNA; segment 4; complete sequence; strain: EH8. | 507 | 406 | 326 | 358 | 0 | 1597 | 0.32 | 0.25 | 0.2 | 0.22 | 0 | 0.43 | 0.9142 | 0.1574 | 0.8557 | 1.9794 | 1 | 0 | 1 | 488 | 390 | 314 | 347 | 0 | 1539 | 0.32 | 0.25 | 0.2 | 0.23 | 0 | 0.43 | 0.9145 | 0.1615 | 0.852 | 1.9797 | 0 | 1 | 0 | 1 | 488 | 390 | 314 | 347 | 0 | 1539 | 0.32 | 0.25 | 0.2 | 0.23 | 0 | 0.43 | 0.9145 | 0.1615 | 0.852 | 1.9797 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 12 | 9 | 9 | 14 | 9 | 12 | 5 | 9 | 10 | 12 | 13 | 14 | 6 | 0 | 11 | 19 | 8 | 18 | 10 | 11 | 17 | 7 | 5 | 11 | 4 | 11 | 4 | 8 | 10 | 11 | 7 | 10 | 4 | 8 | 10 | 14 | 4 | 1 | 11 | 9 | 10 | 0 | 28 | 4 | 8 | 6 | 9 | 8 | 9 | 8 | 0 | 0 | 5 | 5 | 4 | 7 | 1 | 1 | 3 | 1 | 19 | 0 | 0 | 0 |
NA | NC_040733 | NC_040733.1 | Oz virus viral cRNA; segment 5; complete sequence; strain: EH8. | 444 | 345 | 330 | 363 | 0 | 1482 | 0.3 | 0.23 | 0.22 | 0.24 | 0 | 0.47 | 0.9175 | 0.1731 | 0.8431 | 1.9901 | 1 | 0 | 1 | 422 | 311 | 320 | 339 | 0 | 1392 | 0.3 | 0.22 | 0.23 | 0.24 | 0 | 0.47 | 0.9162 | 0.1803 | 0.8405 | 1.9889 | 0 | 1 | 0 | 1 | 422 | 311 | 320 | 339 | 0 | 1392 | 0.3 | 0.22 | 0.23 | 0.24 | 0 | 0.47 | 0.9162 | 0.1803 | 0.8405 | 1.9889 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 12 | 22 | 2 | 6 | 18 | 10 | 8 | 10 | 11 | 7 | 4 | 26 | 3 | 0 | 4 | 14 | 6 | 14 | 12 | 10 | 10 | 7 | 8 | 5 | 5 | 12 | 4 | 11 | 6 | 13 | 13 | 8 | 5 | 6 | 7 | 9 | 4 | 7 | 7 | 6 | 9 | 3 | 11 | 6 | 5 | 4 | 4 | 17 | 4 | 4 | 2 | 5 | 1 | 6 | 4 | 6 | 1 | 0 | 1 | 3 | 13 | 0 | 0 | 3 |
NA | NC_040734 | NC_040734.1 | Oz virus viral cRNA; segment 6; complete sequence; strain: EH8. | 319 | 216 | 197 | 228 | 0 | 960 | 0.33 | 0.23 | 0.21 | 0.24 | 0 | 0.44 | 0.8987 | 0.2655 | 0.7706 | 1.9738 | 1 | 0 | 1 | 260 | 186 | 172 | 195 | 0 | 813 | 0.32 | 0.23 | 0.21 | 0.24 | 0 | 0.45 | 0.9012 | 0.2286 | 0.7987 | 1.981 | 0 | 1 | 0 | 1 | 260 | 186 | 172 | 195 | 0 | 813 | 0.32 | 0.23 | 0.21 | 0.24 | 0 | 0.45 | 0.9012 | 0.2286 | 0.7987 | 1.981 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11 | 11 | 4 | 1 | 5 | 11 | 3 | 8 | 3 | 2 | 3 | 12 | 3 | 1 | 3 | 4 | 7 | 7 | 3 | 1 | 5 | 3 | 10 | 5 | 8 | 5 | 6 | 8 | 4 | 6 | 2 | 3 | 4 | 6 | 4 | 9 | 2 | 1 | 6 | 2 | 3 | 2 | 12 | 2 | 6 | 2 | 2 | 6 | 2 | 4 | 2 | 1 | 2 | 4 | 1 | 4 | 0 | 2 | 0 | 1 | 7 | 0 | 1 | 3 |