| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NA | NC_036476 | NC_036476.1 | Piscine reovirus isolate CGA280-05 core shell protein mRNA; complete cds. | 1004 | 1057 | 987 | 863 | 0 | 3911 | 0.26 | 0.27 | 0.25 | 0.22 | 0 | 0.47 | 0.9333 | 0.0927 | 0.9121 | 1.9961 | 1 | 0 | 1 | 988 | 1040 | 975 | 846 | 0 | 3849 | 0.26 | 0.27 | 0.25 | 0.22 | 0 | 0.47 | 0.9322 | 0.0965 | 0.9088 | 1.9959 | 0 | 1 | 0 | 1 | 988 | 1040 | 975 | 846 | 0 | 3849 | 0.26 | 0.27 | 0.25 | 0.22 | 0 | 0.47 | 0.9322 | 0.0965 | 0.9088 | 1.9959 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 34 | 19 | 14 | 47 | 21 | 29 | 54 | 37 | 19 | 23 | 28 | 30 | 22 | 16 | 18 | 37 | 34 | 22 | 24 | 12 | 27 | 16 | 16 | 29 | 19 | 26 | 11 | 28 | 18 | 26 | 37 | 27 | 28 | 10 | 22 | 33 | 5 | 8 | 18 | 18 | 8 | 15 | 16 | 13 | 12 | 36 | 7 | 18 | 5 | 7 | 6 | 9 | 14 | 40 | 11 | 29 | 0 | 3 | 9 | 19 | 38 | 1 | 0 | 5 |
| NA | NC_036469 | NC_036469.1 | Piscine reovirus isolate CGA280-05 core NTPase mRNA; complete cds. | 581 | 652 | 614 | 536 | 0 | 2383 | 0.24 | 0.27 | 0.26 | 0.22 | 0 | 0.48 | 0.9222 | 0.1254 | 0.882 | 1.9963 | 1 | 0 | 1 | 558 | 627 | 589 | 509 | 0 | 2283 | 0.24 | 0.27 | 0.26 | 0.22 | 0 | 0.48 | 0.9212 | 0.1311 | 0.8771 | 1.9958 | 0 | 1 | 0 | 1 | 558 | 627 | 589 | 509 | 0 | 2283 | 0.24 | 0.27 | 0.26 | 0.22 | 0 | 0.48 | 0.9212 | 0.1311 | 0.8771 | 1.9958 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 27 | 21 | 4 | 19 | 5 | 20 | 17 | 17 | 15 | 12 | 7 | 13 | 12 | 11 | 11 | 19 | 21 | 17 | 21 | 19 | 24 | 14 | 10 | 16 | 6 | 18 | 4 | 10 | 11 | 10 | 25 | 20 | 15 | 4 | 10 | 29 | 4 | 9 | 15 | 8 | 8 | 9 | 15 | 8 | 9 | 18 | 3 | 9 | 4 | 10 | 3 | 9 | 4 | 16 | 6 | 19 | 0 | 4 | 4 | 11 | 14 | 0 | 1 | 7 |
| NA | NC_036470 | NC_036470.1 | Piscine reovirus isolate CGA280-05 outer shell protein mRNA; complete cds. | 599 | 528 | 525 | 527 | 0 | 2179 | 0.27 | 0.24 | 0.24 | 0.24 | 0 | 0.48 | 0.9236 | 0.0649 | 0.9388 | 1.9977 | 1 | 0 | 1 | 573 | 499 | 494 | 498 | 0 | 2064 | 0.28 | 0.24 | 0.24 | 0.24 | 0 | 0.48 | 0.9224 | 0.0731 | 0.9314 | 1.9971 | 0 | 1 | 0 | 1 | 573 | 499 | 494 | 498 | 0 | 2064 | 0.28 | 0.24 | 0.24 | 0.24 | 0 | 0.48 | 0.9224 | 0.0731 | 0.9314 | 1.9971 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18 | 24 | 4 | 24 | 23 | 16 | 25 | 16 | 13 | 7 | 14 | 15 | 17 | 12 | 12 | 16 | 14 | 11 | 9 | 10 | 27 | 16 | 16 | 21 | 10 | 9 | 3 | 8 | 7 | 15 | 15 | 6 | 13 | 7 | 10 | 22 | 4 | 7 | 13 | 7 | 7 | 2 | 17 | 11 | 2 | 17 | 6 | 10 | 2 | 5 | 3 | 10 | 4 | 10 | 5 | 11 | 1 | 0 | 3 | 6 | 16 | 0 | 0 | 4 |
| NA | NC_036471 | NC_036471.1 | Piscine reovirus isolate CGA280-05 non-structural protein mRNA; complete cds. | 569 | 640 | 599 | 595 | 0 | 2403 | 0.24 | 0.27 | 0.25 | 0.25 | 0 | 0.5 | 0.9095 | 0.0621 | 0.9412 | 1.9987 | 1 | 0 | 1 | 529 | 594 | 565 | 571 | 0 | 2259 | 0.23 | 0.26 | 0.25 | 0.25 | 0 | 0.5 | 0.9074 | 0.0632 | 0.94 | 1.9988 | 0 | 1 | 0 | 1 | 529 | 594 | 565 | 571 | 0 | 2259 | 0.23 | 0.26 | 0.25 | 0.25 | 0 | 0.5 | 0.9074 | 0.0632 | 0.94 | 1.9988 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 31 | 15 | 3 | 22 | 11 | 23 | 25 | 21 | 13 | 8 | 11 | 22 | 8 | 5 | 10 | 9 | 20 | 16 | 12 | 10 | 26 | 7 | 8 | 29 | 10 | 16 | 2 | 15 | 6 | 12 | 19 | 16 | 18 | 1 | 8 | 30 | 8 | 5 | 10 | 20 | 10 | 13 | 12 | 13 | 6 | 24 | 6 | 11 | 6 | 7 | 0 | 7 | 3 | 21 | 5 | 8 | 0 | 3 | 3 | 16 | 12 | 0 | 1 | 5 |
| NA | NC_036472 | NC_036472.1 | Piscine reovirus isolate CGA280-05 outer clamp protein and non-structural protein genes; complete cds. | 302 | 261 | 246 | 272 | 0 | 1081 | 0.28 | 0.24 | 0.23 | 0.25 | 0 | 0.48 | 0.9205 | 0.123 | 0.8843 | 1.9959 | 2 | 0 | 2 | 275 | 239 | 230 | 249 | 0 | 993 | 0.28 | 0.24 | 0.23 | 0.25 | 0 | 0.48 | 0.9186 | 0.1097 | 0.8964 | 1.9967 | 0 | 2 | 0 | 2 | 275 | 239 | 230 | 249 | 0 | 993 | 0.28 | 0.24 | 0.23 | 0.25 | 0 | 0.48 | 0.9186 | 0.1097 | 0.8964 | 1.9967 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 16 | 7 | 1 | 10 | 4 | 8 | 4 | 4 | 1 | 8 | 6 | 8 | 10 | 7 | 4 | 9 | 8 | 3 | 4 | 5 | 5 | 9 | 5 | 7 | 5 | 3 | 0 | 8 | 5 | 8 | 7 | 7 | 5 | 4 | 8 | 15 | 9 | 2 | 3 | 4 | 3 | 3 | 9 | 6 | 6 | 6 | 2 | 5 | 2 | 7 | 2 | 8 | 1 | 6 | 3 | 4 | 0 | 1 | 0 | 4 | 3 | 0 | 1 | 3 |
| NA | NC_036473 | NC_036473.1 | Piscine reovirus isolate CGA280-05 core clamp protein mRNA; complete cds. | 317 | 369 | 320 | 323 | 0 | 1329 | 0.24 | 0.28 | 0.24 | 0.24 | 0 | 0.48 | 0.929 | 0.0805 | 0.9249 | 1.9971 | 1 | 0 | 1 | 303 | 351 | 301 | 308 | 0 | 1263 | 0.24 | 0.28 | 0.24 | 0.24 | 0 | 0.48 | 0.9306 | 0.0849 | 0.9203 | 1.997 | 0 | 1 | 0 | 1 | 303 | 351 | 301 | 308 | 0 | 1263 | 0.24 | 0.28 | 0.24 | 0.24 | 0 | 0.48 | 0.9306 | 0.0849 | 0.9203 | 1.997 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 13 | 4 | 4 | 10 | 12 | 3 | 20 | 8 | 2 | 9 | 16 | 2 | 3 | 2 | 5 | 12 | 9 | 7 | 15 | 7 | 6 | 11 | 9 | 14 | 5 | 8 | 3 | 9 | 7 | 11 | 7 | 6 | 14 | 4 | 11 | 10 | 0 | 2 | 7 | 5 | 4 | 5 | 3 | 7 | 4 | 12 | 5 | 9 | 0 | 4 | 1 | 9 | 5 | 9 | 1 | 7 | 0 | 4 | 1 | 5 | 10 | 1 | 0 | 3 |
| NA | NC_036474 | NC_036474.1 | Piscine reovirus isolate CGA280-05 non-structural RNA protein mRNA; complete cds. | 281 | 320 | 311 | 229 | 0 | 1141 | 0.25 | 0.28 | 0.27 | 0.2 | 0 | 0.47 | 0.914 | 0.2167 | 0.8072 | 1.9884 | 1 | 0 | 1 | 259 | 298 | 291 | 217 | 0 | 1065 | 0.24 | 0.28 | 0.27 | 0.2 | 0 | 0.48 | 0.9122 | 0.2157 | 0.8074 | 1.9893 | 0 | 1 | 0 | 1 | 259 | 298 | 291 | 217 | 0 | 1065 | 0.24 | 0.28 | 0.27 | 0.2 | 0 | 0.48 | 0.9122 | 0.2157 | 0.8074 | 1.9893 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10 | 7 | 2 | 9 | 10 | 4 | 8 | 3 | 10 | 2 | 9 | 7 | 3 | 0 | 2 | 7 | 11 | 6 | 13 | 7 | 11 | 9 | 10 | 9 | 4 | 3 | 1 | 7 | 7 | 5 | 10 | 9 | 5 | 1 | 4 | 16 | 5 | 5 | 5 | 9 | 4 | 3 | 15 | 5 | 4 | 5 | 2 | 2 | 4 | 3 | 3 | 3 | 3 | 12 | 1 | 4 | 1 | 0 | 0 | 8 | 8 | 0 | 0 | 0 |
| NA | NC_036475 | NC_036475.1 | Piscine reovirus isolate CGA280-05 outer fiber protein mRNA; complete cds. | 272 | 264 | 239 | 265 | 0 | 1040 | 0.26 | 0.25 | 0.23 | 0.25 | 0 | 0.48 | 0.9167 | 0.0665 | 0.9362 | 1.9983 | 1 | 0 | 1 | 248 | 241 | 216 | 243 | 0 | 948 | 0.26 | 0.25 | 0.23 | 0.26 | 0 | 0.48 | 0.8924 | 0.0731 | 0.9303 | 1.998 | 0 | 1 | 0 | 1 | 248 | 241 | 216 | 243 | 0 | 948 | 0.26 | 0.25 | 0.23 | 0.26 | 0 | 0.48 | 0.8924 | 0.0731 | 0.9303 | 1.998 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 9 | 9 | 2 | 10 | 1 | 5 | 7 | 8 | 4 | 3 | 9 | 6 | 5 | 4 | 2 | 8 | 1 | 14 | 7 | 4 | 18 | 6 | 8 | 7 | 3 | 3 | 1 | 5 | 3 | 12 | 8 | 9 | 2 | 2 | 6 | 16 | 3 | 0 | 2 | 3 | 4 | 4 | 6 | 5 | 1 | 15 | 4 | 3 | 0 | 6 | 0 | 3 | 0 | 6 | 3 | 5 | 1 | 2 | 2 | 0 | 10 | 0 | 0 | 1 |
| NA | NC_036468 | NC_036468.1 | Piscine reovirus isolate CGA280-05 core turret protein mRNA; complete cds. | 1017 | 1151 | 872 | 894 | 0 | 3934 | 0.26 | 0.29 | 0.22 | 0.23 | 0 | 0.45 | 0.9236 | 0.0743 | 0.9295 | 1.9909 | 1 | 0 | 1 | 999 | 1135 | 858 | 881 | 0 | 3873 | 0.26 | 0.29 | 0.22 | 0.23 | 0 | 0.45 | 0.9229 | 0.077 | 0.927 | 1.9908 | 0 | 1 | 0 | 1 | 999 | 1135 | 858 | 881 | 0 | 3873 | 0.26 | 0.29 | 0.22 | 0.23 | 0 | 0.45 | 0.9229 | 0.077 | 0.927 | 1.9908 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 20 | 24 | 4 | 45 | 14 | 27 | 48 | 32 | 12 | 20 | 33 | 34 | 23 | 12 | 17 | 29 | 28 | 30 | 29 | 33 | 18 | 30 | 17 | 54 | 19 | 19 | 9 | 28 | 24 | 33 | 32 | 24 | 20 | 22 | 22 | 40 | 12 | 12 | 27 | 21 | 6 | 13 | 22 | 14 | 9 | 51 | 9 | 15 | 11 | 12 | 3 | 6 | 17 | 21 | 6 | 21 | 1 | 3 | 4 | 21 | 20 | 0 | 0 | 9 |
| NA | NC_036477 | NC_036477.1 | Piscine reovirus isolate CGA280-05 core RNA-dependent RNA polymerase mRNA; complete cds. | 1028 | 1097 | 901 | 890 | 0 | 3916 | 0.26 | 0.28 | 0.23 | 0.23 | 0 | 0.46 | 0.9248 | 0.0386 | 0.9624 | 1.9943 | 1 | 0 | 1 | 1018 | 1082 | 890 | 871 | 0 | 3861 | 0.26 | 0.28 | 0.23 | 0.23 | 0 | 0.46 | 0.9253 | 0.0413 | 0.9598 | 1.994 | 0 | 1 | 0 | 1 | 1018 | 1082 | 890 | 871 | 0 | 3861 | 0.26 | 0.28 | 0.23 | 0.23 | 0 | 0.46 | 0.9253 | 0.0413 | 0.9598 | 1.994 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 41 | 36 | 9 | 39 | 15 | 25 | 34 | 28 | 18 | 22 | 24 | 28 | 24 | 13 | 21 | 30 | 28 | 20 | 35 | 20 | 18 | 29 | 18 | 44 | 16 | 12 | 9 | 34 | 24 | 25 | 33 | 22 | 31 | 16 | 13 | 30 | 14 | 12 | 27 | 14 | 8 | 13 | 37 | 22 | 7 | 47 | 8 | 15 | 5 | 14 | 6 | 11 | 10 | 32 | 6 | 28 | 1 | 6 | 5 | 19 | 31 | 0 | 0 | 5 |