| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NA | NC_014598 | NC_014598.1 | Raspberry latent virus segment S1; complete genome. | 1174 | 1090 | 765 | 919 | 0 | 3948 | 0.3 | 0.28 | 0.19 | 0.23 | 0 | 0.43 | 0.919 | 0.1286 | 0.8804 | 1.9812 | 1 | 0 | 1 | 1144 | 1059 | 739 | 889 | 0 | 3831 | 0.3 | 0.28 | 0.19 | 0.23 | 0 | 0.42 | 0.9185 | 0.1307 | 0.8785 | 1.9805 | 0 | 1 | 0 | 1 | 1144 | 1059 | 739 | 889 | 0 | 3831 | 0.3 | 0.28 | 0.19 | 0.23 | 0 | 0.42 | 0.9185 | 0.1307 | 0.8785 | 1.9805 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 33 | 28 | 14 | 24 | 21 | 40 | 28 | 31 | 22 | 16 | 34 | 36 | 25 | 18 | 15 | 19 | 39 | 23 | 19 | 32 | 9 | 17 | 6 | 55 | 23 | 12 | 18 | 26 | 30 | 36 | 28 | 10 | 17 | 24 | 23 | 21 | 9 | 7 | 25 | 15 | 18 | 3 | 39 | 7 | 9 | 32 | 17 | 32 | 9 | 20 | 16 | 15 | 33 | 18 | 9 | 18 | 1 | 2 | 7 | 8 | 22 | 0 | 0 | 14 |
| NA | NC_014599 | NC_014599.1 | Raspberry latent virus segment 2; complete sequence. | 1124 | 1071 | 835 | 884 | 0 | 3914 | 0.29 | 0.27 | 0.21 | 0.23 | 0 | 0.44 | 0.9175 | 0.0527 | 0.9487 | 1.9888 | 1 | 0 | 1 | 1086 | 1023 | 802 | 845 | 0 | 3756 | 0.29 | 0.27 | 0.21 | 0.22 | 0 | 0.44 | 0.9192 | 0.056 | 0.9456 | 1.9885 | 0 | 1 | 0 | 1 | 1086 | 1023 | 802 | 845 | 0 | 3756 | 0.29 | 0.27 | 0.21 | 0.22 | 0 | 0.44 | 0.9192 | 0.056 | 0.9456 | 1.9885 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 30 | 27 | 20 | 29 | 17 | 45 | 30 | 33 | 10 | 11 | 34 | 39 | 19 | 20 | 15 | 18 | 24 | 33 | 18 | 38 | 19 | 19 | 7 | 42 | 16 | 20 | 17 | 31 | 19 | 27 | 38 | 17 | 19 | 14 | 26 | 17 | 11 | 11 | 18 | 18 | 6 | 8 | 32 | 3 | 4 | 29 | 7 | 25 | 7 | 19 | 10 | 18 | 27 | 36 | 13 | 27 | 0 | 3 | 9 | 5 | 31 | 0 | 1 | 16 |
| NA | NC_014600 | NC_014600.1 | Raspberry latent virus segment S3; complete genome. | 1151 | 1040 | 745 | 882 | 0 | 3818 | 0.3 | 0.27 | 0.2 | 0.23 | 0 | 0.43 | 0.9271 | 0.1349 | 0.8741 | 1.981 | 2 | 0 | 2 | 1122 | 1011 | 725 | 859 | 0 | 3717 | 0.3 | 0.27 | 0.2 | 0.23 | 0 | 0.43 | 0.9278 | 0.1366 | 0.8725 | 1.9809 | 0 | 2 | 0 | 2 | 1122 | 1011 | 725 | 859 | 0 | 3717 | 0.3 | 0.27 | 0.2 | 0.23 | 0 | 0.43 | 0.9278 | 0.1366 | 0.8725 | 1.9809 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 32 | 32 | 18 | 28 | 30 | 29 | 24 | 32 | 11 | 15 | 25 | 42 | 18 | 18 | 15 | 13 | 32 | 22 | 18 | 37 | 16 | 16 | 6 | 36 | 30 | 13 | 22 | 18 | 26 | 31 | 26 | 16 | 9 | 23 | 17 | 31 | 10 | 6 | 20 | 5 | 8 | 4 | 37 | 10 | 9 | 24 | 15 | 32 | 16 | 13 | 11 | 15 | 44 | 23 | 10 | 19 | 0 | 8 | 11 | 9 | 31 | 0 | 1 | 21 |
| NA | NC_014601 | NC_014601.1 | Raspberry latent virus segment S4; complete genome. | 1068 | 1061 | 720 | 801 | 0 | 3650 | 0.29 | 0.29 | 0.2 | 0.22 | 0 | 0.42 | 0.9224 | 0.0565 | 0.9462 | 1.979 | 1 | 0 | 1 | 1045 | 1037 | 701 | 781 | 0 | 3564 | 0.29 | 0.29 | 0.2 | 0.22 | 0 | 0.42 | 0.9226 | 0.0578 | 0.945 | 1.9786 | 0 | 1 | 0 | 1 | 1045 | 1037 | 701 | 781 | 0 | 3564 | 0.29 | 0.29 | 0.2 | 0.22 | 0 | 0.42 | 0.9226 | 0.0578 | 0.945 | 1.9786 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 37 | 26 | 16 | 22 | 20 | 29 | 31 | 34 | 4 | 16 | 44 | 35 | 32 | 9 | 11 | 23 | 31 | 20 | 18 | 34 | 13 | 11 | 5 | 45 | 30 | 14 | 23 | 29 | 37 | 35 | 16 | 15 | 16 | 21 | 18 | 16 | 11 | 7 | 11 | 13 | 8 | 7 | 16 | 3 | 9 | 24 | 9 | 29 | 14 | 15 | 8 | 6 | 33 | 30 | 16 | 31 | 1 | 7 | 6 | 8 | 23 | 0 | 0 | 7 |
| NA | NC_014602 | NC_014602.1 | Raspberry latent virus segment S5; complete genome. | 780 | 723 | 454 | 606 | 0 | 2563 | 0.3 | 0.28 | 0.18 | 0.24 | 0 | 0.41 | 0.9214 | 0.1813 | 0.838 | 1.9716 | 1 | 0 | 1 | 637 | 602 | 391 | 527 | 0 | 2157 | 0.3 | 0.28 | 0.18 | 0.24 | 0 | 0.43 | 0.9248 | 0.1764 | 0.8435 | 1.9769 | 0 | 1 | 0 | 1 | 637 | 602 | 391 | 527 | 0 | 2157 | 0.3 | 0.28 | 0.18 | 0.24 | 0 | 0.43 | 0.9248 | 0.1764 | 0.8435 | 1.9769 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 25 | 23 | 11 | 16 | 11 | 18 | 15 | 19 | 6 | 8 | 19 | 28 | 12 | 7 | 5 | 16 | 15 | 14 | 13 | 15 | 6 | 10 | 1 | 25 | 10 | 11 | 5 | 20 | 16 | 25 | 14 | 11 | 9 | 9 | 12 | 5 | 6 | 4 | 7 | 4 | 8 | 0 | 17 | 4 | 5 | 17 | 10 | 12 | 20 | 9 | 5 | 8 | 19 | 13 | 15 | 20 | 0 | 4 | 4 | 7 | 12 | 1 | 0 | 3 |
| NA | NC_014603 | NC_014603.1 | Raspberry latent virus segment S6; complete genome. | 601 | 567 | 373 | 455 | 0 | 1996 | 0.3 | 0.28 | 0.19 | 0.23 | 0 | 0.41 | 0.9238 | 0.1281 | 0.8816 | 1.9757 | 1 | 0 | 1 | 580 | 540 | 355 | 433 | 0 | 1908 | 0.3 | 0.28 | 0.19 | 0.23 | 0 | 0.41 | 0.9234 | 0.1347 | 0.8754 | 1.9746 | 0 | 1 | 0 | 1 | 580 | 540 | 355 | 433 | 0 | 1908 | 0.3 | 0.28 | 0.19 | 0.23 | 0 | 0.41 | 0.9234 | 0.1347 | 0.8754 | 1.9746 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 18 | 7 | 14 | 10 | 9 | 15 | 14 | 19 | 3 | 7 | 24 | 32 | 13 | 5 | 8 | 14 | 7 | 12 | 13 | 15 | 1 | 3 | 1 | 33 | 7 | 7 | 10 | 10 | 18 | 19 | 8 | 10 | 6 | 12 | 10 | 17 | 2 | 7 | 11 | 1 | 2 | 2 | 7 | 2 | 2 | 20 | 5 | 11 | 9 | 7 | 3 | 8 | 17 | 20 | 15 | 16 | 0 | 3 | 4 | 8 | 16 | 0 | 1 | 6 |
| NA | NC_014604 | NC_014604.1 | Raspberry latent virus segment S7; complete genome. | 592 | 509 | 372 | 484 | 0 | 1957 | 0.3 | 0.26 | 0.19 | 0.25 | 0 | 0.44 | 0.9217 | 0.2062 | 0.8142 | 1.9809 | 1 | 0 | 1 | 564 | 481 | 357 | 455 | 0 | 1857 | 0.3 | 0.26 | 0.19 | 0.25 | 0 | 0.44 | 0.92 | 0.2001 | 0.8187 | 1.9814 | 0 | 1 | 0 | 1 | 564 | 481 | 357 | 455 | 0 | 1857 | 0.3 | 0.26 | 0.19 | 0.25 | 0 | 0.44 | 0.92 | 0.2001 | 0.8187 | 1.9814 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 24 | 16 | 13 | 15 | 8 | 18 | 19 | 13 | 2 | 7 | 19 | 22 | 16 | 6 | 14 | 15 | 19 | 18 | 7 | 13 | 10 | 3 | 2 | 32 | 12 | 13 | 4 | 11 | 8 | 16 | 11 | 5 | 3 | 12 | 13 | 9 | 1 | 3 | 5 | 4 | 13 | 2 | 9 | 2 | 4 | 14 | 8 | 7 | 5 | 5 | 10 | 4 | 8 | 8 | 6 | 11 | 0 | 5 | 6 | 5 | 21 | 1 | 0 | 4 |
| NA | NC_014605 | NC_014605.1 | Raspberry latent virus segment S8; complete genome. | 602 | 563 | 367 | 404 | 0 | 1936 | 0.31 | 0.29 | 0.19 | 0.21 | 0 | 0.4 | 0.9192 | 0.0815 | 0.9218 | 1.9688 | 1 | 0 | 1 | 565 | 537 | 336 | 368 | 0 | 1806 | 0.31 | 0.3 | 0.19 | 0.2 | 0 | 0.39 | 0.9202 | 0.0709 | 0.9317 | 1.9638 | 0 | 1 | 0 | 1 | 565 | 537 | 336 | 368 | 0 | 1806 | 0.31 | 0.3 | 0.19 | 0.2 | 0 | 0.39 | 0.9202 | 0.0709 | 0.9317 | 1.9638 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15 | 14 | 15 | 10 | 5 | 11 | 16 | 21 | 4 | 9 | 19 | 22 | 12 | 5 | 8 | 9 | 14 | 10 | 7 | 16 | 4 | 3 | 6 | 22 | 5 | 7 | 6 | 15 | 18 | 18 | 7 | 10 | 3 | 11 | 9 | 9 | 4 | 6 | 4 | 7 | 4 | 1 | 20 | 6 | 3 | 17 | 2 | 11 | 7 | 9 | 5 | 4 | 27 | 11 | 7 | 18 | 0 | 0 | 3 | 4 | 20 | 1 | 0 | 6 |
| NA | NC_014606 | NC_014606.1 | Raspberry latent virus segment S9; complete genome. | 362 | 326 | 217 | 300 | 0 | 1205 | 0.3 | 0.27 | 0.18 | 0.25 | 0 | 0.43 | 0.92 | 0.2129 | 0.8119 | 1.9763 | 1 | 0 | 1 | 303 | 269 | 177 | 256 | 0 | 1005 | 0.3 | 0.27 | 0.18 | 0.25 | 0 | 0.43 | 0.9164 | 0.2419 | 0.7896 | 1.9743 | 0 | 1 | 0 | 1 | 303 | 269 | 177 | 256 | 0 | 1005 | 0.3 | 0.27 | 0.18 | 0.25 | 0 | 0.43 | 0.9164 | 0.2419 | 0.7896 | 1.9743 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 14 | 14 | 6 | 9 | 6 | 6 | 8 | 8 | 1 | 4 | 7 | 9 | 3 | 4 | 6 | 8 | 4 | 7 | 5 | 6 | 8 | 6 | 0 | 15 | 6 | 4 | 7 | 11 | 3 | 18 | 5 | 3 | 2 | 3 | 6 | 3 | 0 | 5 | 4 | 2 | 2 | 0 | 9 | 4 | 0 | 13 | 2 | 7 | 5 | 8 | 3 | 1 | 6 | 6 | 2 | 4 | 0 | 2 | 3 | 2 | 8 | 1 | 0 | 1 |
| NA | NC_014607 | NC_014607.1 | Raspberry latent virus segment S10; complete genome. | 324 | 284 | 300 | 233 | 0 | 1141 | 0.28 | 0.25 | 0.26 | 0.2 | 0 | 0.47 | 0.9217 | 0.1915 | 0.8266 | 1.9899 | 2 | 0 | 2 | 303 | 248 | 269 | 209 | 0 | 1029 | 0.29 | 0.24 | 0.26 | 0.2 | 0 | 0.46 | 0.9224 | 0.2253 | 0.7977 | 1.9872 | 0 | 2 | 0 | 2 | 303 | 248 | 269 | 209 | 0 | 1029 | 0.29 | 0.24 | 0.26 | 0.2 | 0 | 0.46 | 0.9224 | 0.2253 | 0.7977 | 1.9872 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10 | 6 | 1 | 8 | 10 | 3 | 15 | 4 | 5 | 7 | 12 | 7 | 6 | 3 | 3 | 10 | 2 | 2 | 6 | 7 | 7 | 0 | 6 | 9 | 12 | 6 | 6 | 5 | 5 | 11 | 8 | 4 | 3 | 4 | 11 | 8 | 4 | 3 | 10 | 6 | 1 | 4 | 5 | 1 | 0 | 7 | 1 | 7 | 3 | 3 | 2 | 4 | 9 | 7 | 1 | 7 | 0 | 4 | 5 | 2 | 11 | 0 | 1 | 3 |