| Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of ‘G’ + ‘C’ nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NA | NC_014511 | NC_014511.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 1; complete genome. | 1287 | 1003 | 437 | 547 | 0 | 3274 | 0.39 | 0.31 | 0.13 | 0.17 | 0 | 0.3 | 0.8943 | 0.2358 | 0.7891 | 1.8715 | 1 | 0 | 1 | 1278 | 993 | 431 | 538 | 0 | 3240 | 0.39 | 0.31 | 0.13 | 0.17 | 0 | 0.3 | 0.8931 | 0.2359 | 0.7891 | 1.8695 | 0 | 1 | 0 | 1 | 1278 | 993 | 431 | 538 | 0 | 3240 | 0.39 | 0.31 | 0.13 | 0.17 | 0 | 0.3 | 0.8931 | 0.2359 | 0.7891 | 1.8695 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 40 | 29 | 27 | 33 | 26 | 15 | 23 | 35 | 2 | 5 | 61 | 40 | 46 | 12 | 8 | 19 | 10 | 13 | 8 | 31 | 4 | 10 | 3 | 50 | 15 | 7 | 9 | 18 | 64 | 11 | 6 | 6 | 5 | 53 | 23 | 14 | 2 | 0 | 14 | 2 | 1 | 0 | 60 | 1 | 0 | 21 | 4 | 29 | 4 | 14 | 12 | 5 | 61 | 3 | 4 | 19 | 0 | 2 | 7 | 4 | 26 | 1 | 0 | 3 |
| NA | NC_014512 | NC_014512.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 2; complete genome. | 1043 | 847 | 410 | 501 | 0 | 2801 | 0.37 | 0.3 | 0.15 | 0.18 | 0 | 0.33 | 0.8922 | 0.2036 | 0.8152 | 1.9024 | 1 | 0 | 1 | 1030 | 828 | 395 | 489 | 0 | 2742 | 0.38 | 0.3 | 0.14 | 0.18 | 0 | 0.32 | 0.8916 | 0.2151 | 0.8058 | 1.8985 | 0 | 1 | 0 | 1 | 1030 | 828 | 395 | 489 | 0 | 2742 | 0.38 | 0.3 | 0.14 | 0.18 | 0 | 0.32 | 0.8916 | 0.2151 | 0.8058 | 1.8985 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 23 | 17 | 19 | 28 | 21 | 16 | 14 | 34 | 1 | 5 | 58 | 35 | 26 | 9 | 9 | 17 | 19 | 10 | 8 | 32 | 6 | 8 | 2 | 58 | 16 | 4 | 25 | 13 | 29 | 10 | 3 | 8 | 6 | 36 | 21 | 9 | 5 | 0 | 11 | 2 | 0 | 0 | 39 | 0 | 1 | 27 | 1 | 32 | 2 | 4 | 6 | 5 | 40 | 2 | 11 | 21 | 1 | 1 | 9 | 10 | 20 | 0 | 0 | 9 |
| NA | NC_014513 | NC_014513.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 3; complete genome. | 866 | 684 | 388 | 428 | 0 | 2366 | 0.37 | 0.29 | 0.16 | 0.18 | 0 | 0.34 | 0.9074 | 0.1664 | 0.8482 | 1.9223 | 1 | 0 | 1 | 855 | 675 | 381 | 423 | 0 | 2334 | 0.37 | 0.29 | 0.16 | 0.18 | 0 | 0.34 | 0.9066 | 0.1699 | 0.8451 | 1.9218 | 0 | 1 | 0 | 1 | 855 | 675 | 381 | 423 | 0 | 2334 | 0.37 | 0.29 | 0.16 | 0.18 | 0 | 0.34 | 0.9066 | 0.1699 | 0.8451 | 1.9218 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 17 | 13 | 21 | 24 | 20 | 4 | 25 | 18 | 3 | 4 | 46 | 32 | 48 | 8 | 6 | 10 | 12 | 13 | 10 | 19 | 8 | 6 | 2 | 34 | 13 | 5 | 7 | 15 | 32 | 19 | 7 | 7 | 4 | 28 | 30 | 12 | 0 | 1 | 7 | 1 | 0 | 0 | 31 | 2 | 3 | 14 | 8 | 17 | 4 | 9 | 7 | 7 | 30 | 4 | 4 | 20 | 1 | 0 | 2 | 0 | 20 | 0 | 0 | 4 |
| NA | NC_014514 | NC_014514.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 4; complete genome. | 776 | 690 | 273 | 365 | 0 | 2104 | 0.37 | 0.33 | 0.13 | 0.17 | 0 | 0.3 | 0.8969 | 0.2029 | 0.8186 | 1.8789 | 1 | 0 | 1 | 767 | 677 | 257 | 357 | 0 | 2058 | 0.37 | 0.33 | 0.12 | 0.17 | 0 | 0.3 | 0.8969 | 0.2252 | 0.8013 | 1.8716 | 0 | 1 | 0 | 1 | 767 | 677 | 257 | 357 | 0 | 2058 | 0.37 | 0.33 | 0.12 | 0.17 | 0 | 0.3 | 0.8969 | 0.2252 | 0.8013 | 1.8716 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 7 | 7 | 13 | 14 | 5 | 10 | 11 | 19 | 2 | 5 | 53 | 28 | 23 | 7 | 14 | 8 | 12 | 8 | 5 | 34 | 4 | 9 | 2 | 32 | 6 | 4 | 13 | 14 | 40 | 9 | 6 | 3 | 3 | 32 | 16 | 10 | 7 | 0 | 7 | 2 | 2 | 0 | 37 | 2 | 4 | 14 | 2 | 22 | 9 | 6 | 6 | 5 | 30 | 2 | 8 | 8 | 0 | 4 | 1 | 6 | 9 | 1 | 0 | 4 |
| NA | NC_014515 | NC_014515.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 5; complete genome. | 650 | 550 | 307 | 365 | 0 | 1872 | 0.35 | 0.29 | 0.16 | 0.19 | 0 | 0.36 | 0.9103 | 0.1696 | 0.8436 | 1.9367 | 1 | 0 | 1 | 585 | 512 | 290 | 338 | 0 | 1725 | 0.34 | 0.3 | 0.17 | 0.2 | 0 | 0.36 | 0.9095 | 0.143 | 0.8666 | 1.9424 | 0 | 1 | 0 | 1 | 585 | 512 | 290 | 338 | 0 | 1725 | 0.34 | 0.3 | 0.17 | 0.2 | 0 | 0.36 | 0.9095 | 0.143 | 0.8666 | 1.9424 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 20 | 8 | 7 | 8 | 7 | 8 | 4 | 20 | 1 | 7 | 25 | 28 | 18 | 9 | 6 | 10 | 9 | 12 | 7 | 18 | 11 | 7 | 0 | 25 | 6 | 1 | 9 | 17 | 17 | 9 | 9 | 12 | 2 | 15 | 11 | 13 | 4 | 1 | 14 | 3 | 5 | 3 | 19 | 0 | 8 | 8 | 1 | 17 | 12 | 13 | 3 | 4 | 12 | 1 | 3 | 18 | 0 | 1 | 4 | 4 | 17 | 1 | 0 | 3 |
| NA | NC_014516 | NC_014516.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 6; complete genome. | 433 | 395 | 248 | 277 | 0 | 1353 | 0.32 | 0.29 | 0.18 | 0.2 | 0 | 0.39 | 0.9077 | 0.1011 | 0.9038 | 1.9617 | 1 | 0 | 1 | 382 | 354 | 222 | 239 | 0 | 1197 | 0.32 | 0.3 | 0.19 | 0.2 | 0 | 0.39 | 0.9082 | 0.0749 | 0.9278 | 1.9606 | 0 | 1 | 0 | 1 | 382 | 354 | 222 | 239 | 0 | 1197 | 0.32 | 0.3 | 0.19 | 0.2 | 0 | 0.39 | 0.9082 | 0.0749 | 0.9278 | 1.9606 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 16 | 3 | 12 | 15 | 9 | 4 | 19 | 10 | 3 | 4 | 23 | 11 | 12 | 4 | 1 | 7 | 7 | 6 | 7 | 10 | 7 | 5 | 1 | 18 | 3 | 1 | 5 | 15 | 13 | 11 | 5 | 5 | 2 | 14 | 11 | 2 | 3 | 0 | 6 | 1 | 0 | 0 | 1 | 0 | 0 | 7 | 0 | 14 | 1 | 6 | 1 | 6 | 4 | 2 | 5 | 17 | 1 | 1 | 4 | 2 | 14 | 0 | 0 | 2 |
| NA | NC_014517 | NC_014517.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 7; complete genome. | 465 | 334 | 178 | 265 | 0 | 1242 | 0.37 | 0.27 | 0.14 | 0.21 | 0 | 0.36 | 0.9079 | 0.3603 | 0.695 | 1.9174 | 1 | 0 | 1 | 427 | 303 | 149 | 234 | 0 | 1113 | 0.38 | 0.27 | 0.13 | 0.21 | 0 | 0.34 | 0.905 | 0.3918 | 0.6732 | 1.9027 | 0 | 1 | 0 | 1 | 427 | 303 | 149 | 234 | 0 | 1113 | 0.38 | 0.27 | 0.13 | 0.21 | 0 | 0.34 | 0.905 | 0.3918 | 0.6732 | 1.9027 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 10 | 10 | 9 | 3 | 7 | 8 | 6 | 16 | 0 | 0 | 13 | 22 | 13 | 1 | 10 | 6 | 7 | 6 | 5 | 13 | 5 | 3 | 1 | 20 | 3 | 5 | 4 | 8 | 8 | 10 | 5 | 6 | 4 | 9 | 8 | 7 | 1 | 1 | 5 | 2 | 0 | 0 | 24 | 6 | 2 | 3 | 0 | 13 | 4 | 2 | 1 | 2 | 9 | 0 | 6 | 2 | 0 | 1 | 0 | 0 | 12 | 1 | 0 | 3 |
| NA | NC_014518 | NC_014518.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 8; complete genome. | 362 | 310 | 152 | 202 | 0 | 1026 | 0.35 | 0.3 | 0.15 | 0.2 | 0 | 0.35 | 0.9124 | 0.2186 | 0.8044 | 1.9217 | 1 | 0 | 1 | 335 | 285 | 132 | 181 | 0 | 933 | 0.36 | 0.31 | 0.14 | 0.19 | 0 | 0.34 | 0.8886 | 0.2372 | 0.79 | 1.9113 | 0 | 1 | 0 | 1 | 335 | 285 | 132 | 181 | 0 | 933 | 0.36 | 0.31 | 0.14 | 0.19 | 0 | 0.34 | 0.8886 | 0.2372 | 0.79 | 1.9113 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 15 | 7 | 4 | 8 | 6 | 2 | 8 | 10 | 2 | 2 | 19 | 15 | 10 | 5 | 4 | 0 | 4 | 5 | 5 | 10 | 7 | 3 | 1 | 16 | 3 | 1 | 7 | 5 | 15 | 2 | 1 | 3 | 3 | 6 | 6 | 4 | 2 | 1 | 2 | 0 | 1 | 0 | 22 | 1 | 1 | 11 | 3 | 8 | 1 | 6 | 2 | 4 | 6 | 1 | 2 | 5 | 1 | 0 | 1 | 1 | 4 | 0 | 0 | 1 |
| NA | NC_014519 | NC_014519.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 9; complete genome. | 372 | 350 | 125 | 178 | 0 | 1025 | 0.36 | 0.34 | 0.12 | 0.17 | 0 | 0.3 | 0.8948 | 0.2054 | 0.8216 | 1.8688 | 1 | 0 | 1 | 349 | 325 | 113 | 164 | 0 | 951 | 0.37 | 0.34 | 0.12 | 0.17 | 0 | 0.29 | 0.8805 | 0.2197 | 0.8101 | 1.8625 | 0 | 1 | 0 | 1 | 349 | 325 | 113 | 164 | 0 | 951 | 0.37 | 0.34 | 0.12 | 0.17 | 0 | 0.29 | 0.8805 | 0.2197 | 0.8101 | 1.8625 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 11 | 3 | 11 | 7 | 5 | 1 | 7 | 13 | 0 | 6 | 24 | 7 | 16 | 3 | 3 | 3 | 3 | 5 | 3 | 3 | 3 | 5 | 0 | 19 | 3 | 1 | 5 | 9 | 22 | 4 | 2 | 3 | 0 | 16 | 10 | 4 | 0 | 0 | 2 | 0 | 1 | 1 | 11 | 0 | 2 | 10 | 0 | 7 | 9 | 4 | 1 | 0 | 11 | 0 | 0 | 5 | 1 | 0 | 0 | 0 | 10 | 0 | 0 | 2 |
| NA | NC_014520 | NC_014520.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 10; complete genome. | 269 | 232 | 128 | 136 | 0 | 765 | 0.35 | 0.3 | 0.17 | 0.18 | 0 | 0.35 | 0.9 | 0.1042 | 0.9018 | 1.9268 | 2 | 0 | 2 | 245 | 201 | 106 | 114 | 0 | 666 | 0.37 | 0.3 | 0.16 | 0.17 | 0 | 0.33 | 0.8866 | 0.153 | 0.8605 | 1.9068 | 32 | 2 | 0 | 2 | 245 | 201 | 106 | 114 | 0 | 666 | 0.37 | 0.3 | 0.16 | 0.17 | 0 | 0.33 | 0.8866 | 0.153 | 0.8605 | 1.9068 | 32 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5 | 5 | 11 | 6 | 3 | 2 | 4 | 13 | 1 | 1 | 9 | 8 | 9 | 3 | 3 | 7 | 3 | 0 | 2 | 4 | 8 | 4 | 0 | 7 | 2 | 1 | 4 | 4 | 5 | 1 | 6 | 2 | 1 | 10 | 7 | 3 | 0 | 1 | 2 | 2 | 3 | 0 | 10 | 0 | 1 | 7 | 2 | 2 | 1 | 2 | 2 | 0 | 7 | 1 | 1 | 1 | 0 | 0 | 0 | 2 | 8 | 0 | 2 | 1 |
| NA | NC_014521 | NC_014521.1 | Rotavirus D chicken/05V0049/DEU/2005 segment 11; complete genome. | 256 | 200 | 90 | 125 | 0 | 671 | 0.38 | 0.3 | 0.13 | 0.19 | 0 | 0.32 | 0.8101 | 0.2856 | 0.7506 | 1.8913 | 1 | 0 | 1 | 231 | 176 | 70 | 110 | 0 | 587 | 0.39 | 0.3 | 0.12 | 0.19 | 0 | 0.31 | 0.7974 | 0.3574 | 0.6991 | 1.8691 | 0 | 1 | 0 | 1 | 231 | 176 | 70 | 110 | 0 | 587 | 0.39 | 0.3 | 0.12 | 0.19 | 0 | 0.31 | 0.7974 | 0.3574 | 0.6991 | 1.8691 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 9 | 6 | 0 | 3 | 4 | 2 | 4 | 11 | 0 | 1 | 13 | 15 | 8 | 2 | 3 | 6 | 8 | 1 | 0 | 5 | 0 | 2 | 0 | 19 | 3 | 1 | 2 | 3 | 4 | 2 | 1 | 0 | 1 | 4 | 3 | 2 | 0 | 0 | 0 | 0 | 3 | 1 | 11 | 0 | 3 | 4 | 0 | 4 | 3 | 1 | 2 | 0 | 7 | 1 | 0 | 1 | 0 | 0 | 0 | 2 | 3 | 0 | 0 | 1 |