Assembly Assembly | Locus_ID Locus_ID | Version Version | Definition Sequence description | bp_chromo_A Total number of 'A' nucleotides in the whole sequence | bp_chromo_T Total number of 'T' nucleotides in the whole sequence | bp_chromo_C Total number of 'C' nucleotides in the whole sequence | bp_chromo_G Total number of 'G' nucleotides in the whole sequence | bp_chromo_N Total number of 'N' nucleotides in the whole sequence | bp_chromo_tot Total number of nucleotides in the whole sequence | fr_chromo_A Frequency of 'A' nucleotides in the whole sequence | fr_chromo_T Frequency of 'T' nucleotides in the whole sequence | fr_chromo_C Frequency of 'C' nucleotides in the whole sequence | fr_chromo_G Frequency of 'G' nucleotides in the whole sequence | fr_chromo_N Frequency of 'N' nucleotides in the whole sequence | GC_chromo Percentage of āGā + āCā nucleotides in the whole sequence | topo_entropy_chromo Topological entropy of the whole sequence | chargaff_pf_chromo Chargaff's second parity rule score (method1) of the whole sequence | chargaff_ct_chromo Chargaff's second parity rule score (method2) of the whole sequencee | shannon_chromo Shannon entropy of the whole sequence | n_gene_pos Number of genes in the positive strand | n_gene_neg Number of genes in the negative strand | n_gene_tot Total number of genes in the chromosome | bp_gene_A Number of 'A' bases in total genes | bp_gene_T Number of 'T' bases in total genes | bp_gene_C Number of 'C' bases in total genes | bp_gene_G Number of 'G' bases in total genes | bp_gene_N Number of 'N' bases in total genes | bp_gene_tot Total number of bases in total genes | fr_gene_A Frequency of 'A' bases among total gene bases | fr_gene_T Frequency of 'T' bases among total gene bases | fr_gene_C Frequency of 'C' bases among total gene bases | fr_gene_G Frequency of 'G' bases among total gene bases | fr_gene_N Frequency of 'N' bases among total gene bases | GC_gene Percentage of 'G' and 'C' bases in total genes | topo_entropy_gene Topological entropy calculated from total gene sequences | chargaff_pf_gene Chargaff's second parity rule score (method1) for total genes | chargaff_ct_gene Chargaff's second parity rule score (method2)for total genes | shannon_gene Shannon entropy score for total genes | bp_gene_overlap_tot Number of bases overlapping between genes on two strands | n_cds_pos Number of CDS in the positive strand | n_cds_neg Number of CDS in the negative strand | n_cds_tot Total number of CDS in the chromosome | bp_cds_A Number of 'A' bases in total CDS (coding sequences) | bp_cds_T Number of 'T' bases in total CDS | bp_cds_C Number of 'C' bases in total CDS | bp_cds_G Number of 'G' bases in total CDS | bp_cds_N Number of 'N' bases in total CDS | bp_cds_tot Total bases in total CDS | fr_cds_A Frequency of 'A' bases among total CDS bases | fr_cds_T Frequency of 'T' bases among total CDS bases | fr_cds_C Frequency of 'C' bases among total CDS bases | fr_cds_G Frequency of 'G' bases among total CDS bases | fr_cds_N Frequency of 'N' bases among total CDS bases | GC_cds Percentage of 'G' and 'C' bases in total CDS | topo_entropy_cds Topological entropy calculated from total CDS sequences | chargaff_pf_cds Chargaff's second parity rule score (method1) for total CDS | chargaff_ct_cds Chargaff's second parity rule score (method2) for total CDS | shannon_cds Shannon entropy score for total CDS | bp_cds_overlap_tot Number of bases overlapping between CDS on two strands | bp_cds_intron_A Number of 'A' bases in total introns between CDS | bp_cds_intron_T Number of 'T' bases in total introns between CDS | bp_cds_intron_C Number of 'C' bases in total introns between CDS | bp_cds_intron_G Number of 'G' bases in total introns between CDS | bp_cds_intron_N Number of 'N' bases in total introns between CDS | bp_cds_intron_tot Total bases in total introns between CDS | fr_cds_intron_A Frequency of 'A' bases in total introns between CDS | fr_cds_intron_T Frequency of 'T' bases in total introns between CDS | fr_cds_intron_C Frequency of 'C' bases in total introns between CDS | fr_cds_intron_G Frequency of 'G' bases in total introns between CDS | fr_cds_intron_N Frequency of 'N' bases in total introns between CDS | GC_cds_intron Percentage of 'G' and 'C' bases in total introns between CDS | topo_entropy_cds_intron Topological entropy calculated from total intron sequences between CDS | chargaff_pf_cds_intron Chargaff's second parity rule score (method1) for total introns between CDS | chargaff_ct_cds_intron Chargaff's second parity rule score (method2) for total introns between CDS | shannon_cds_intron Shannon entropy score for total introns between CDS | bp_cds_intron_overlap_tot Number of bases overlapping between introns between CDS on two strands | n_ncRNA_pos Number of ncRNA in the positive strand | n_ncRNA_neg Number of ncRNA in the negative strand | n_ncRNA_tot Total number of ncRNA in the chromosome | bp_ncRNA_A Number of 'A' bases in total ncRNA | bp_ncRNA_T bp_ncRNA_T | bp_ncRNA_C Number of 'C' bases in total ncRNA | bp_ncRNA_G Number of 'G' bases in total ncRNA | bp_ncRNA_N Number of 'N' bases in total ncRNA | bp_ncRNA_tot Total bases in total ncRNA | fr_ncRNA_A Frequency of 'A' bases among total ncRNA bases | fr_ncRNA_T Frequency of 'T' bases among total ncRNA bases | fr_ncRNA_C Frequency of 'C' bases among total ncRNA bases | fr_ncRNA_G Frequency of 'G' bases among total ncRNA bases | fr_ncRNA_N Frequency of 'N' bases among total ncRNA bases | GC_ncRNA Percentage of 'G' and 'C' bases in total ncRNA | topo_entropy_ncRNA Topological entropy calculated from total ncRNA sequences | chargaff_pf_ncRNA Chargaff's second parity rule score (method1) for total ncRNA | chargaff_ct_ncRNA Chargaff's second parity rule score (method2) for total ncRNA | shannon_ncRNA Shannon entropy score for total ncRNA | bp_ncRNA_overlap_tot Number of bases overlapping between ncRNA on two strands | bp_nc_intron_A Number of 'A' bases in total introns between ncRNA | bp_nc_intron_T Number of 'T' bases in total introns between ncRNA | bp_nc_intron_C Number of 'C' bases in total introns between ncRNA | bp_nc_intron_G Number of 'G' bases in total introns between ncRNA | bp_nc_intron_N Number of 'N' bases in total introns between ncRNA | bp_nc_intron_tot Total bases in total introns between ncRNA | fr_nc_intron_A Frequency of 'A' bases in total introns between ncRNA | fr_nc_intron_T Frequency of 'T' bases in total introns between ncRNA | fr_nc_intron_C Frequency of 'C' bases in total introns between ncRNA | fr_nc_intron_G Frequency of 'G' bases in total introns between ncRNA | fr_nc_intron_N Frequency of 'N' bases in total introns between ncRNA | GC_nc_intron Percentage of 'G' and 'C' bases in total introns between ncRNA | topo_entropy_nc_intron Topological entropy calculated from total intron sequences between ncRNA | chargaff_pf_nc_intron Chargaff's second parity rule score (method1) for total introns between ncRNA | chargaff_ct_nc_intron Chargaff's second parity rule score (method2) for total introns between ncRNA | shannon_nc_intron Shannon entropy score for total introns between ncRNA | bp_nc_intron_overlap_tot Number of bases overlapping between introns between ncRNA on two strands | n_tRNA_pos Number of tRNA in the positive strand | n_tRNA_neg Number of tRNA in the negative strand | n_tRNA_tot Total number of tRNA in the chromosome | bp_tRNA_A Number of 'A' bases in total tRNA | bp_tRNA_T Number of 'T' bases in total tRNA | bp_tRNA_C Number of 'C' bases in total tRNA | bp_tRNA_G Number of 'G' bases in total tRNA | bp_tRNA_N Number of 'N' bases in total tRNA | bp_tRNA_tot Total bases in total tRNA | fr_tRNA_A Frequency of 'A' bases among total tRNA bases | fr_tRNA_T Frequency of 'T' bases among total tRNA bases | fr_tRNA_C Frequency of 'C' bases among total tRNA bases | fr_tRNA_G Frequency of 'G' bases among total tRNA bases | fr_tRNA_N Frequency of 'N' bases among total tRNA bases | GC_tRNA Percentage of 'G' and 'C' bases in total tRNA | topo_entropy_tRNA Topological entropy calculated from total tRNA sequences | chargaff_pf_tRNA Chargaff's second parity rule score (method1) for total tRNA | chargaff_ct_tRNA Chargaff's second parity rule score (method2) for total tRNA | shannon_tRNA Shannon entropy score for total tRNA | bp_tRNA_overlap_tot Number of bases overlapping between tRNA on two strands | n_rRNA_pos Number of rRNA in the positive strand | n_rRNA_neg Number of rRNA in the negative strand | n_rRNA_tot Total number of rRNA in the chromosome | bp_rRNA_A Number of 'A' bases in total rRNA | bp_rRNA_T Number of 'T' bases in total rRNA | bp_rRNA_C Number of 'C' bases in total rRNA | bp_rRNA_G Number of 'G' bases in total rRNA | bp_rRNA_N Number of 'N' bases in total rRNA | bp_rRNA_tot Total bases in total rRNA | fr_rRNA_A Frequency of 'A' bases among total rRNA bases | fr_rRNA_T Frequency of 'T' bases among total rRNA bases | fr_rRNA_C Frequency of 'C' bases among total rRNA bases | fr_rRNA_G Frequency of 'G' bases among total rRNA bases | fr_rRNA_N Frequency of 'N' bases among total rRNA bases | GC_rRNA Percentage of 'G' and 'C' bases in total rRNA | topo_entropy_rRNA Topological entropy calculated from total rRNA sequences | chargaff_pf_rRNA Chargaff's second parity rule score (method1) for total rRNA | chargaff_ct_rRNA Chargaff's second parity rule score (method2) total rRNA | shannon_rRNA Shannon entropy score for total rRNA | bp_rRNA_overlap_tot Number of bases overlapping between rRNA on two strands | ATG ATG | AAG AAG | GTA GTA | ACT ACT | GCA GCA | GAG GAG | GCT GCT | ATT ATT | TCC TCC | TGG TGG | AAT AAT | GAA GAA | TCA TCA | ACG ACG | AGT AGT | AAC AAC | TCT TCT | GTG GTG | TTC TTC | TTT TTT | CTG CTG | GGT GGT | CTC CTC | GAT GAT | CAG CAG | ACC ACC | CTA CTA | TTG TTG | TAT TAT | GGA GGA | ATC ATC | CTT CTT | GTC GTC | ATA ATA | ACA ACA | GAC GAC | CAC CAC | CCC CCC | TAC TAC | GCC GCC | AGC AGC | CGC CGC | AAA AAA | GGC GGC | TGC TGC | GTT GTT | GGG GGG | AGA AGA | TGT TGT | CAT CAT | TCG TCG | GCG GCG | TTA TTA | CCT CCT | AGG AGG | CCA CCA | TAG TAG | CGG CGG | CCG CCG | CGT CGT | CAA CAA | TAA TAA | TGA TGA | CGA CGA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
NA | NC_055622 | NC_055622.1 | Sophora yellow stunt virus isolate IR:Har:H13:Soph:17 segment DNA-C; complete sequence. | 322 | 301 | 143 | 218 | 0 | 984 | 0.33 | 0.31 | 0.15 | 0.22 | 0 | 0.37 | 0.8987 | 0.2415 | 0.7954 | 1.9362 | 1 | 0 | 1 | 171 | 159 | 61 | 110 | 0 | 501 | 0.34 | 0.32 | 0.12 | 0.22 | 0 | 0.34 | 0.8792 | 0.3229 | 0.7422 | 1.9049 | 0 | 1 | 0 | 1 | 171 | 159 | 61 | 110 | 0 | 501 | 0.34 | 0.32 | 0.12 | 0.22 | 0 | 0.34 | 0.8792 | 0.3229 | 0.7422 | 1.9049 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5 | 11 | 7 | 0 | 1 | 7 | 3 | 9 | 1 | 2 | 7 | 9 | 3 | 0 | 4 | 0 | 4 | 1 | 1 | 3 | 1 | 3 | 2 | 6 | 5 | 1 | 1 | 3 | 6 | 1 | 2 | 3 | 0 | 5 | 5 | 2 | 1 | 1 | 1 | 0 | 0 | 0 | 3 | 0 | 1 | 9 | 1 | 4 | 4 | 7 | 0 | 1 | 4 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 3 | 0 | 1 | 0 |
NA | NC_055616 | NC_055616.1 | Sophora yellow stunt virus isolate IR:Har:H13:Soph:17 segment DNA-M; complete sequence. | 317 | 279 | 161 | 221 | 0 | 978 | 0.32 | 0.29 | 0.16 | 0.23 | 0 | 0.39 | 0.9083 | 0.2208 | 0.8043 | 1.9564 | 1 | 0 | 1 | 122 | 89 | 52 | 85 | 0 | 348 | 0.35 | 0.26 | 0.15 | 0.24 | 0 | 0.39 | 0.8764 | 0.3973 | 0.6706 | 1.9398 | 0 | 1 | 0 | 1 | 122 | 89 | 52 | 85 | 0 | 348 | 0.35 | 0.26 | 0.15 | 0.24 | 0 | 0.39 | 0.8764 | 0.3973 | 0.6706 | 1.9398 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 6 | 3 | 1 | 2 | 3 | 0 | 0 | 5 | 0 | 3 | 1 | 7 | 4 | 1 | 2 | 3 | 1 | 1 | 1 | 2 | 2 | 2 | 0 | 4 | 1 | 1 | 0 | 0 | 4 | 6 | 2 | 0 | 0 | 2 | 8 | 1 | 0 | 1 | 1 | 0 | 2 | 0 | 2 | 3 | 0 | 4 | 0 | 5 | 3 | 1 | 0 | 0 | 4 | 3 | 4 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 |
NA | NC_055623 | NC_055623.1 | Sophora yellow stunt virus isolate IR:Har:H13:Soph:17 segment DNA-N; complete sequence. | 300 | 306 | 153 | 227 | 0 | 986 | 0.3 | 0.31 | 0.16 | 0.23 | 0 | 0.39 | 0.9107 | 0.2046 | 0.8272 | 1.9511 | 1 | 0 | 1 | 145 | 152 | 54 | 111 | 0 | 462 | 0.31 | 0.33 | 0.12 | 0.24 | 0 | 0.36 | 0.895 | 0.369 | 0.7202 | 1.9086 | 0 | 1 | 0 | 1 | 145 | 152 | 54 | 111 | 0 | 462 | 0.31 | 0.33 | 0.12 | 0.24 | 0 | 0.36 | 0.895 | 0.369 | 0.7202 | 1.9086 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5 | 8 | 4 | 1 | 2 | 5 | 1 | 7 | 1 | 1 | 6 | 2 | 2 | 0 | 5 | 3 | 1 | 0 | 4 | 5 | 3 | 9 | 2 | 9 | 3 | 0 | 0 | 5 | 8 | 4 | 0 | 1 | 2 | 4 | 3 | 3 | 0 | 1 | 1 | 0 | 0 | 0 | 3 | 0 | 1 | 3 | 0 | 4 | 6 | 4 | 0 | 1 | 2 | 1 | 2 | 1 | 0 | 0 | 1 | 0 | 3 | 1 | 0 | 0 |
NA | NC_055618 | NC_055618.1 | Sophora yellow stunt virus isolate IR:Har:H13:Soph:17 segment DNA-R; complete sequence. | 304 | 261 | 172 | 260 | 0 | 997 | 0.3 | 0.26 | 0.17 | 0.26 | 0 | 0.43 | 0.8859 | 0.2798 | 0.76 | 1.9717 | 1 | 0 | 1 | 270 | 218 | 148 | 228 | 0 | 864 | 0.31 | 0.25 | 0.17 | 0.26 | 0 | 0.44 | 0.8987 | 0.3193 | 0.7283 | 1.9689 | 0 | 1 | 0 | 1 | 270 | 218 | 148 | 228 | 0 | 864 | 0.31 | 0.25 | 0.17 | 0.26 | 0 | 0.44 | 0.8987 | 0.3193 | 0.7283 | 1.9689 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 13 | 21 | 5 | 8 | 2 | 15 | 10 | 8 | 2 | 6 | 6 | 13 | 5 | 3 | 2 | 2 | 4 | 3 | 2 | 8 | 3 | 7 | 4 | 5 | 5 | 2 | 0 | 2 | 10 | 2 | 2 | 5 | 3 | 5 | 6 | 9 | 0 | 2 | 6 | 0 | 3 | 3 | 6 | 5 | 2 | 4 | 5 | 4 | 5 | 5 | 0 | 1 | 3 | 3 | 5 | 4 | 1 | 1 | 2 | 2 | 7 | 0 | 0 | 1 |
NA | NC_055617 | NC_055617.1 | Sophora yellow stunt virus isolate IR:Har:H13:Soph:17 segment DNA-S; complete sequence. | 306 | 296 | 169 | 217 | 0 | 988 | 0.31 | 0.3 | 0.17 | 0.22 | 0 | 0.39 | 0.9036 | 0.141 | 0.8731 | 1.9608 | 1 | 0 | 1 | 166 | 167 | 86 | 118 | 0 | 537 | 0.31 | 0.31 | 0.16 | 0.22 | 0 | 0.38 | 0.8886 | 0.1599 | 0.8614 | 1.9512 | 0 | 1 | 0 | 1 | 166 | 167 | 86 | 118 | 0 | 537 | 0.31 | 0.31 | 0.16 | 0.22 | 0 | 0.38 | 0.8886 | 0.1599 | 0.8614 | 1.9512 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 7 | 8 | 6 | 1 | 3 | 2 | 7 | 10 | 1 | 3 | 4 | 5 | 3 | 0 | 5 | 2 | 10 | 1 | 0 | 4 | 0 | 7 | 0 | 3 | 2 | 6 | 1 | 3 | 4 | 3 | 3 | 1 | 2 | 4 | 6 | 1 | 1 | 0 | 2 | 0 | 1 | 0 | 2 | 2 | 0 | 8 | 1 | 8 | 1 | 1 | 0 | 0 | 6 | 3 | 2 | 3 | 0 | 0 | 1 | 4 | 4 | 1 | 0 | 0 |
NA | NC_055621 | NC_055621.1 | Sophora yellow stunt virus isolate IR:Har:H13:Soph:17 segment DNA-U1; complete sequence. | 314 | 312 | 144 | 214 | 0 | 984 | 0.32 | 0.32 | 0.15 | 0.22 | 0 | 0.36 | 0.906 | 0.1987 | 0.8333 | 1.9357 | 1 | 0 | 1 | 137 | 136 | 54 | 99 | 0 | 426 | 0.32 | 0.32 | 0.13 | 0.23 | 0 | 0.36 | 0.875 | 0.2978 | 0.7691 | 1.9192 | 0 | 1 | 0 | 1 | 137 | 136 | 54 | 99 | 0 | 426 | 0.32 | 0.32 | 0.13 | 0.23 | 0 | 0.36 | 0.875 | 0.2978 | 0.7691 | 1.9192 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 5 | 9 | 2 | 3 | 1 | 5 | 1 | 11 | 0 | 1 | 8 | 3 | 1 | 1 | 1 | 4 | 1 | 1 | 2 | 1 | 4 | 5 | 2 | 6 | 3 | 0 | 0 | 6 | 6 | 1 | 0 | 3 | 2 | 3 | 4 | 2 | 0 | 0 | 1 | 1 | 1 | 2 | 3 | 1 | 0 | 8 | 0 | 1 | 4 | 0 | 0 | 1 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 2 | 4 | 1 | 0 | 0 |
NA | NC_055619 | NC_055619.1 | Sophora yellow stunt virus isolate IR:Har:H13:Soph:17 segment DNA-U2; complete sequence. | 334 | 294 | 131 | 221 | 0 | 980 | 0.34 | 0.3 | 0.13 | 0.23 | 0 | 0.36 | 0.8886 | 0.3194 | 0.7365 | 1.923 | 1 | 0 | 1 | 123 | 88 | 40 | 76 | 0 | 327 | 0.38 | 0.27 | 0.12 | 0.23 | 0 | 0.35 | 0.8663 | 0.4762 | 0.6209 | 1.9003 | 0 | 1 | 0 | 1 | 123 | 88 | 40 | 76 | 0 | 327 | 0.38 | 0.27 | 0.12 | 0.23 | 0 | 0.35 | 0.8663 | 0.4762 | 0.6209 | 1.9003 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 4 | 9 | 1 | 1 | 1 | 1 | 1 | 0 | 0 | 3 | 3 | 10 | 1 | 0 | 0 | 0 | 0 | 2 | 2 | 3 | 0 | 1 | 0 | 5 | 0 | 1 | 0 | 3 | 7 | 1 | 1 | 2 | 0 | 2 | 0 | 2 | 0 | 0 | 0 | 2 | 0 | 0 | 7 | 0 | 1 | 5 | 2 | 3 | 3 | 4 | 0 | 0 | 0 | 2 | 1 | 3 | 0 | 0 | 0 | 2 | 6 | 1 | 0 | 0 |
NA | NC_055620 | NC_055620.1 | Sophora yellow stunt virus isolate IR:Har:H13:Soph:17 segment DNA-U4; complete sequence. | 321 | 313 | 139 | 223 | 0 | 996 | 0.32 | 0.31 | 0.14 | 0.22 | 0 | 0.36 | 0.8886 | 0.2447 | 0.7992 | 1.9312 | 1 | 0 | 1 | 111 | 113 | 43 | 78 | 0 | 345 | 0.32 | 0.33 | 0.12 | 0.23 | 0 | 0.35 | 0.8634 | 0.2982 | 0.7668 | 1.9132 | 0 | 1 | 0 | 1 | 111 | 113 | 43 | 78 | 0 | 345 | 0.32 | 0.33 | 0.12 | 0.23 | 0 | 0.35 | 0.8634 | 0.2982 | 0.7668 | 1.9132 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | NA | NA | NA | NA | NA | NA | NA | NA | NA | NA | 0 | 3 | 9 | 2 | 1 | 2 | 1 | 1 | 3 | 1 | 2 | 1 | 7 | 3 | 0 | 1 | 3 | 4 | 0 | 2 | 4 | 6 | 5 | 1 | 6 | 4 | 0 | 0 | 2 | 2 | 1 | 1 | 1 | 0 | 6 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 4 | 1 | 1 | 1 | 4 | 0 | 0 | 8 | 1 | 2 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 |